GWAS1011705_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1011705_H (total lipids in large LDL QTL GWAS1011705 (human)) Homo sapiens

Symbol: GWAS1011705_H
Name: total lipids in large LDL QTL GWAS1011705 (human)
RGD ID: 407362729
Trait: total lipids in large LDL
LOD Score: Not Available
P Value: 4.0E-69
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381558,387,985 - 58,387,986RGD_MAPPER_PIPELINEGRCh38
GRCh371558,680,184 - 58,680,185RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1011705_HHumantotal lipids in large LDL  IAGPrs7177289405850206 GWAS_CATALOGPMID:38448586
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs7177289)
Human AssemblyChrPosition (strand)Source
GRCh381558,387,985 - 58,387,986RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407111495GWAS760471_Hhigh density lipoprotein cholesterol measurement QTL GWAS760471 (human)2e-31high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407352128GWAS1001104_Htriglycerides:total lipids ratio, intermediate density lipoprotein measurement QTL GWAS1001104 (human)1e-253triglycerides:total lipids ratio, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)155838798558387986Human
407361486GWAS1010462_Hlow density lipoprotein cholesterol measurement QTL GWAS1010462 (human)2e-80low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)155838798558387986Human
407111496GWAS760472_Hlipid measurement, high density lipoprotein cholesterol measurement QTL GWAS760472 (human)7e-35lipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407233738GWAS882714_Hmonounsaturated fatty acids; 16:1, 18:1 measurement QTL GWAS882714 (human)5e-51monounsaturated fatty acids; 16:1, 18:1 measurement155838798558387986Human
407359574GWAS1008550_Htotal cholesterol in medium LDL QTL GWAS1008550 (human)1e-18total cholesterol in medium LDL155838798558387986Human
407111510GWAS760486_Hesterified cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS760486 (human)5e-30esterified cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407259221GWAS908197_Hphospholipids:total lipids ratio QTL GWAS908197 (human)2e-20phospholipids:total lipids ratio155838798558387986Human
407116368GWAS765344_Hphospholipid measurement, high density lipoprotein cholesterol measurement QTL GWAS765344 (human)3e-10polyunsaturated fatty acids to total fatty acids percentage blood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
407261779GWAS910755_Hfree cholesterol to total lipids in medium LDL percentage QTL GWAS910755 (human)7e-38free cholesterol to total lipids in medium LDL percentage 155838798558387986Human
407350864GWAS999840_Htriglycerides:total lipids ratio, low density lipoprotein cholesterol measurement QTL GWAS999840 (human)4e-162triglycerides:total lipids ratio, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)155838798558387986Human
407399376GWAS1048352_Hhigh density lipoprotein cholesterol measurement QTL GWAS1048352 (human)2e-40high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407399378GWAS1048354_Htriglyceride measurement QTL GWAS1048354 (human)2e-08triglyceride measurementblood triglyceride level (CMO:0000118)155838798558387986Human
407112031GWAS761007_Hapolipoprotein A 1 measurement QTL GWAS761007 (human)1e-19apolipoprotein A 1 measurementblood apolipoprotein AI level (CMO:0000520)155838798558387986Human
407111513GWAS760489_Hfree cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS760489 (human)4e-33free cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407360856GWAS1009832_Htotal cholesterol measurement, low density lipoprotein cholesterol measurement QTL GWAS1009832 (human)7e-27total cholesterol measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)155838798558387986Human
407244263GWAS893239_Htriglycerides in small HDL measurement QTL GWAS893239 (human)6e-63triglycerides in small HDL measurementblood high density lipoprotein triglyceride level (CMO:0002686)155838798558387986Human
407255653GWAS904629_Htotal lipids in LDL measurement QTL GWAS904629 (human)2e-11total lipids in LDL measurement 155838798558387986Human
407114210GWAS763186_Hcholine measurement, phosphatidylcholine measurement QTL GWAS763186 (human)2e-22choline measurement, phosphatidylcholine measurement155838798558387986Human
407254127GWAS903103_Hphospholipids in large LDL measurement QTL GWAS903103 (human)9e-11phospholipids in large LDL measurementblood low density lipoprotein phospholipid level (CMO:0001568)155838798558387986Human
407106793GWAS755769_Hlipid measurement, high density lipoprotein cholesterol measurement QTL GWAS755769 (human)4e-31lipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407351533GWAS1000509_Hcholesteryl esters:total lipids ratio, intermediate density lipoprotein measurement QTL GWAS1000509 (human)3e-270cholesteryl esters:total lipids ratio, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)155838798558387986Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human
407352424GWAS1001400_Hlow density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS1001400 (human)3e-30low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)155838798558387986Human
407355504GWAS1004480_Hfree cholesterol in small LDL measurement QTL GWAS1004480 (human)2e-21free cholesterol in small LDL measurement 155838798558387986Human
407257596GWAS906572_Hphospholipids:total lipids ratio QTL GWAS906572 (human)2e-153phospholipids:total lipids ratio155838798558387986Human
407361788GWAS1010764_Hcholesterol esters in medium LDL measurement QTL GWAS1010764 (human)1e-16cholesterol esters in medium LDL measurement155838798558387986Human
407202937GWAS851913_Htriglyceride measurement QTL GWAS851913 (human)8e-18triglyceride measurementblood triglyceride level (CMO:0000118)155838798558387986Human
407352314GWAS1001290_Hvery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio QTL GWAS1001290 (human)3e-34very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)155838798558387986Human
407359608GWAS1008584_Hlow density lipoprotein cholesterol measurement QTL GWAS1008584 (human)4e-45low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)155838798558387986Human
407363320GWAS1012296_Htotal cholesterol in large LDL QTL GWAS1012296 (human)7e-39total cholesterol in large LDL155838798558387986Human
407257345GWAS906321_Htotal lipids in VLDL measurement QTL GWAS906321 (human)8e-10total lipids in VLDL measurement 155838798558387986Human
407115534GWAS764510_Hfree cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS764510 (human)5e-08free cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407115535GWAS764511_Hphospholipid measurement, high density lipoprotein cholesterol measurement QTL GWAS764511 (human)6e-10phospholipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407107464GWAS756440_Hhigh density lipoprotein cholesterol measurement QTL GWAS756440 (human)8e-32high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407358860GWAS1007836_Hlow density lipoprotein cholesterol measurement QTL GWAS1007836 (human)2e-34low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)155838798558387986Human
407106323GWAS755299_Hhigh density lipoprotein cholesterol measurement QTL GWAS755299 (human)3e-29very low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)155838798558387986Human
407357718GWAS1006694_Htotal cholesterol in small LDL QTL GWAS1006694 (human)2e-14total cholesterol in small LDL155838798558387986Human
407107472GWAS756448_Hphospholipid measurement, high density lipoprotein cholesterol measurement QTL GWAS756448 (human)2e-28phospholipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407106327GWAS755303_Hesterified cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS755303 (human)8e-30esterified cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407363603GWAS1012579_Hcholesterol esters in large LDL measurement QTL GWAS1012579 (human)2e-32cholesterol esters in large LDL measurement155838798558387986Human
407351825GWAS1000801_Hcholesterol:total lipids ratio, intermediate density lipoprotein measurement QTL GWAS1000801 (human)6e-274cholesterol:total lipids ratio, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)155838798558387986Human
407106330GWAS755306_Hfree cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS755306 (human)1e-27free cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407389097GWAS1038073_Hserum gamma-glutamyl transferase measurement QTL GWAS1038073 (human)3e-13serum gamma-glutamyl transferase measurementserum gamma-glutamyltransferase activity level (CMO:0002241)155838798558387986Human
407114274GWAS763250_Htotal cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS763250 (human)8e-17total cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407251756GWAS900732_Hintermediate density lipoprotein measurement QTL GWAS900732 (human)2e-46intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)155838798558387986Human
407362729GWAS1011705_Htotal lipids in large LDL QTL GWAS1011705 (human)4e-69total lipids in large LDL155838798558387986Human
407359400GWAS1008376_Htotal lipids in small LDL QTL GWAS1008376 (human)9e-29total lipids in small LDL155838798558387986Human
407224106GWAS873082_Hcholesterol to total lipids in medium HDL percentage QTL GWAS873082 (human)5e-37cholesterol to total lipids in medium HDL percentage 155838798558387986Human
407113653GWAS762629_Htotal cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS762629 (human)6e-16total cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407363894GWAS1012870_Hlow density lipoprotein cholesterol measurement, lipid measurement QTL GWAS1012870 (human)9e-38low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)155838798558387986Human
407356084GWAS1005060_Hesterified cholesterol measurement, low density lipoprotein cholesterol measurement QTL GWAS1005060 (human)1e-12esterified cholesterol measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)155838798558387986Human
407235248GWAS884224_Htriglycerides to total lipids in small HDL percentage QTL GWAS884224 (human)3e-90triglycerides to total lipids in small HDL percentage 155838798558387986Human
407362096GWAS1011072_Hfree cholesterol in medium LDL measurement QTL GWAS1011072 (human)3e-27free cholesterol in medium LDL measurement 155838798558387986Human
407111484GWAS760460_Htotal cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS760460 (human)8e-31total cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407367230GWAS1016206_Hserum gamma-glutamyl transferase measurement QTL GWAS1016206 (human)5e-12serum gamma-glutamyl transferase measurementserum gamma-glutamyltransferase activity level (CMO:0002241)155838798558387986Human
407111486GWAS760462_Htotal cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS760462 (human)2e-17total cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407111481GWAS760457_Hhigh density lipoprotein cholesterol measurement QTL GWAS760457 (human)2e-35high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155838798558387986Human
407357754GWAS1006730_Hvery low density lipoprotein cholesterol measurement, esterified cholesterol measurement QTL GWAS1006730 (human)1e-42very low density lipoprotein cholesterol measurement, esterified cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)155838798558387986Human
407260987GWAS909963_Hfree cholesterol to total lipids in large LDL percentage QTL GWAS909963 (human)3e-23free cholesterol to total lipids in large LDL percentage 155838798558387986Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS851913_H GCST90269504 Total triglycerides levels (UKB data field 23407) 88,329 European ancestry individuals T 0.353964 8E-18 17.097 rs7177289 0.0412852 triglyceride measurement (EFO:0004530)
 PMID:36764567
GWAS873082_H GCST90269737 Cholesterol to total lipids in medium HDL percentage (UKB data field 23640) 88,329 European ancestry individuals T 0.353964 5E-37 36.302 rs7177289 0.0603484 cholesterol to total lipids in medium HDL percentage (EFO:0022237)
 PMID:36764567
GWAS882714_H GCST90269544 Monounsaturated fatty acids levels (UKB data field 23447) 88,268 European ancestry individuals T 0.353995 5E-51 50.302 rs7177289 0.0734587 monounsaturated fatty acids (EFO:0022187)
 PMID:36764567
GWAS884224_H GCST90269745 Triglycerides to total lipids in small HDL percentage (UKB data field 23648) 88,329 European ancestry individuals T 0.353964 3E-90 89.523 rs7177289 0.0953169 triglycerides to total lipids in small HDL percentage (EFO:0022336)
 PMID:36764567
GWAS893239_H GCST90269675 Triglycerides in small HDL (UKB data field 23578) 88,329 European ancestry individuals T 0.353964 6E-63 62.222 rs7177289 0.0806102 triglycerides in small HDL measurement (EFO:0022158)
 PMID:36764567
None Available GCST90269550 Polyunsaturated fatty acids to total fatty acids percentage (UKB data field 23453) 88,268 European ancestry individuals T 0.353995 3E-10 9.523 rs7177289 0.0299281 polyunsaturated fatty acids to total fatty acids percentage (EFO:0022303)
 PMID:36764567
GWAS900732_H GCST90269620 Concentration of IDL particles (UKB data field 23523) 88,329 European ancestry individuals T 0.353964 2E-46 45.699 rs7177289 0.0701415 intermediate density lipoprotein measurement (EFO:0008595)
 PMID:36764567
GWAS903103_H GCST90269629 Phospholipids in large LDL (UKB data field 23532) 88,329 European ancestry individuals T 0.353964 9E-11 10.046 rs7177289 0.0319272 phospholipids in large LDL measurement (EFO:0022174)
 PMID:36764567
GWAS904629_H GCST90269522 Total lipids in LDL (UKB data field 23425) 88,329 European ancestry individuals T 0.353964 2E-11 10.699 rs7177289 0.0333513 total lipids in LDL measurement (EFO:0022308)
 PMID:36764567
GWAS906321_H GCST90269521 Total lipids in VLDL (UKB data field 23424) 88,329 European ancestry individuals T 0.353964 8E-10 9.097 rs7177289 0.0298515 total lipids in VLDL measurement (EFO:0022314)
 PMID:36764567
GWAS906572_H GCST90269686 Phospholipids to total lipids in large VLDL percentage (UKB data field 23589) 88,321 European ancestry individuals T 0.353968 2E-153 152.699 rs7177289 0.126969 phospholipids:total lipids ratio (EFO:0020946)
 PMID:36764567
GWAS908197_H GCST90269696 Phospholipids to total lipids in small VLDL percentage (UKB data field 23599) 88,329 European ancestry individuals T 0.353964 2E-20 19.699 rs7177289 0.0440958 phospholipids:total lipids ratio (EFO:0020946)
 PMID:36764567
GWAS909963_H GCST90269714 Free cholesterol to total lipids in large LDL percentage (UKB data field 23617) 88,329 European ancestry individuals T 0.353964 3E-23 22.523 rs7177289 0.0470791 free cholesterol to total lipids in large LDL percentage (EFO:0022280)
 PMID:36764567
GWAS910755_H GCST90269719 Free cholesterol to total lipids in medium LDL percentage (UKB data field 23622) 88,329 European ancestry individuals T 0.353964 7E-38 37.155 rs7177289 0.0612333 free cholesterol to total lipids in medium LDL percentage (EFO:0022283)
 PMID:36764567
GWAS999840_H GCST90092967 Triglycerides to total lipids ratio in small LDL 115,082 European ancestry individuals C 0.645987 4E-162 161.398 rs7177289 0.112899 triglycerides:total lipids ratio (EFO:0020947)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS1000509_H GCST90092834 Cholesteryl esters to total lipids ratio in IDL 115,082 European ancestry individuals C 0.645987 3E-270 269.523 rs7177289 0.147632 cholesteryl esters:total lipids ratio (EFO:0020944)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS1000801_H GCST90092832 Cholesterol to total lipids ratio in IDL 115,082 European ancestry individuals C 0.645987 6E-274 273.222 rs7177289 0.14835 cholesterol:total lipids ratio (EFO:0020943)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS1001104_H GCST90092842 Triglycerides to total lipids ratio in IDL 115,082 European ancestry individuals C 0.645987 1E-253 253 rs7177289 0.140924 triglycerides:total lipids ratio (EFO:0020947)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS1001290_H GCST90093029 Cholesterol to total lipids ratio in very small VLDL 115,082 European ancestry individuals C 0.645987 3E-34 33.523 rs7177289 0.0498032 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesterol:total lipids ratio (EFO:0020943)
 PMID:35213538
GWAS1001400_H GCST90092861 Free cholesterol to total lipids ratio in large LDL 115,082 European ancestry individuals C 0.645987 3E-30 29.523 rs7177289 0.0469903 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
GWAS1004480_H GCST90302095 Free cholesterol in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 2E-21 20.699 rs7177289 0.039 free cholesterol in small LDL measurement (EFO:0022271)
 PMID:38448586
GWAS1005060_H GCST90302093 Cholesterol esters in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 1E-12 12 rs7177289 0.0293 esterified cholesterol measurement (EFO:0008589)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS1006694_H GCST90302091 Total Cholesterol in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 2E-14 13.699 rs7177289 0.0315 total cholesterol in small LDL (EFO:0022179)
 PMID:38448586
GWAS1006730_H GCST90302106 Cholesterol esters in small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3617 1E-42 42 rs7177289 0.0554 very low density lipoprotein cholesterol measurement (EFO:0008317)
esterified cholesterol measurement (EFO:0008589)
 PMID:38448586
None Available GCST90093031 Cholesteryl esters to total lipids ratio in very small VLDL 115,082 European ancestry individuals C 0.645987 3E-29 28.523 rs7177289 0.0455763 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
GWAS1007836_H GCST90302098 Concentration of small LDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 2E-34 33.699 rs7177289 0.0499 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS1008376_H GCST90302097 Total lipids in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 9E-29 28.046 rs7177289 0.0454 total lipids in small LDL (EFO:0022168)
 PMID:38448586
GWAS1008550_H GCST90302043 Total cholesterol in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 1E-18 18 rs7177289 0.0364 total cholesterol in medium LDL (EFO:0022185)
 PMID:38448586
GWAS1008584_H GCST90302050 Concentration of medium LDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 4E-45 44.398 rs7177289 0.0575 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS1009832_H GCST90301991 Total cholesterol levels in LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 7E-27 26.155 rs7177289 0.0442 total cholesterol measurement (EFO:0004574)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS1010462_H GCST90302014 Concentration of large LDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 2E-80 79.699 rs7177289 0.0774 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS1010764_H GCST90302045 Cholesterol esters in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 1E-16 16 rs7177289 0.0342 cholesterol esters in medium LDL measurement (EFO:0022186)
 PMID:38448586
GWAS1011072_H GCST90302047 Free cholesterol in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 3E-27 26.523 rs7177289 0.0445 free cholesterol in medium LDL measurement (EFO:0022268)
 PMID:38448586
GWAS1011705_H GCST90302013 Total lipids in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 4E-69 68.398 rs7177289 0.0716 total lipids in large LDL (EFO:0022163)
 PMID:38448586
GWAS1012296_H GCST90302007 Total cholesterol in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 7E-39 38.155 rs7177289 0.0537 total cholesterol in large LDL (EFO:0022167)
 PMID:38448586
GWAS1012579_H GCST90302009 Cholesterol esters in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3615 2E-32 31.699 rs7177289 0.0488 cholesterol esters in large LDL measurement (EFO:0022165)
 PMID:38448586
GWAS1012870_H GCST90302049 Total lipid levels in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.3616 9E-38 37.046 rs7177289 0.0524 low density lipoprotein cholesterol measurement (EFO:0004611)
lipid measurement (EFO:0004529)
 PMID:38448586
GWAS1016206_H GCST90013407 Liver enzyme levels (gamma-glutamyl transferase) 437,194 European ancestry individuals C 0.645118 5E-12 11.302 rs7177289 0.00366283 serum gamma-glutamyl transferase measurement (EFO:0004532)
 PMID:33972514
GWAS1038073_H GCST90428730 Gamma glutamyl transferase levels 875,069 European ancestry individuals T NR 3E-13 12.523 rs7177289 0.0039 serum gamma-glutamyl transferase measurement (EFO:0004532)
 PMID:38632349
GWAS1048352_H GCST90239653 High density lipoprotein cholesterol levels 48,057 Hispanic individuals T 0.322352 2E-40 39.699 rs7177289 0.0970526 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34887591
GWAS1048354_H GCST90239666 Triglyceride levels 40,963 South Asian ancestry individuals T 0.331142 2E-8 7.699 rs7177289 0.0439511 triglyceride measurement (EFO:0004530)
 PMID:34887591
None Available GCST90091703 Postprandial free cholesterol in medium HDL null T 0.357977686 5E-8 7.302 rs7177289 0.121417 free cholesterol measurement (EFO:0008591)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091566 Fasting phospholipid levels in medium HDL null T 0.356386393 3E-10 9.523 rs7177289 0.134927 phospholipid measurement (EFO:0004639)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091706 Postprandial phospholipid levels in medium HDL null T 0.357977686 6E-10 9.222 rs7177289 0.137304 phospholipid measurement (EFO:0004639)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091583 Fasting phosphatidylcholine and other cholines null T 0.355746432 2E-22 21.699 rs7177289 0.211462 choline measurement (EFO:0010116)
phosphatidylcholine measurement (EFO:0010226)
 PMID:34610981
None Available GCST90091507 Fasting apolipoprotein A-I null T 0.355815589 1E-19 19 rs7177289 0.193087 apolipoprotein A 1 measurement (EFO:0004614)
 PMID:34610981
None Available GCST90091761 Postprandial total cholesterol in very large HDL null T 0.361858211 2E-31 30.699 rs7177289 0.26274 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091762 Postprandial cholesterol esters in very large HDL null T 0.361858211 5E-30 29.302 rs7177289 0.256749 esterified cholesterol measurement (EFO:0008589)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091540 Fasting total cholesterol in large HDL null T 0.358261821 3E-29 28.523 rs7177289 0.243795 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091520 Fasting total cholesterol in HDL2 null T 0.35588684 6E-16 15.222 rs7177289 0.17269 total cholesterol measurement (EFO:0004574)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091521 Fasting total cholesterol in HDL3 null T 0.355890767 8E-31 30.097 rs7177289 0.245322 total cholesterol measurement (EFO:0004574)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091522 Fasting total cholesterol in HDL null T 0.355815589 2E-17 16.699 rs7177289 0.180921 total cholesterol measurement (EFO:0004574)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091763 Postprandial free cholesterol in very large HDL null T 0.361858211 4E-33 32.398 rs7177289 0.270379 free cholesterol measurement (EFO:0008591)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091764 Postprandial total lipids in very large HDL null T 0.361858211 7E-35 34.155 rs7177289 0.277701 lipid measurement (EFO:0004529)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091765 Postprandial very large HDL particle concentration null T 0.361858211 2E-35 34.699 rs7177289 0.280259 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091766 Postprandial phospholipid levels in very large HDL null T 0.361858211 3E-29 28.523 rs7177289 0.253349 phospholipid measurement (EFO:0004639)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091664 Postprandial total cholesterol in HDL null T 0.357895354 8E-17 16.097 rs7177289 0.184853 total cholesterol measurement (EFO:0004574)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091541 Fasting cholesterol esters in large HDL null T 0.358261821 8E-30 29.097 rs7177289 0.245923 esterified cholesterol measurement (EFO:0008589)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091542 Fasting free cholesterol in large HDL null T 0.358261821 1E-27 27 rs7177289 0.236141 free cholesterol measurement (EFO:0008591)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091543 Fasting total lipids in large HDL null T 0.358261821 4E-31 30.398 rs7177289 0.251551 lipid measurement (EFO:0004529)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091544 Fasting large HDL particle concentration null T 0.358261821 8E-32 31.097 rs7177289 0.254537 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
None Available GCST90091545 Fasting phospholipid levels in large HDL null T 0.358261821 2E-28 27.699 rs7177289 0.239955 phospholipid measurement (EFO:0004639)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:34610981
Database Acc Id Source(s)
GWAS Catalog GCST90302013 GWAS Catalog

RGD Curation Notes
Note Type Note Reference