RH124288 Marker Search Result - Rat Genome Database

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Marker: RH124288

Symbol: RH124288
Previously known as:
RGD ID: 5502289
Expected Size: 133 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2191,289,838 - 91,289,971 (+)MAPPERmRatBN7.2
mRatBN7.2191,289,838 - 91,289,971 (-)MAPPERmRatBN7.2
Rnor_6.01040,054,788 - 40,054,920NCBIRnor6.0
Rnor_6.0194,990,475 - 94,990,607NCBIRnor6.0
Rnor_5.01039,827,536 - 39,827,668UniSTSRnor5.0
Rnor_5.0196,082,898 - 96,083,030UniSTSRnor5.0
RGSC_v3.4191,099,584 - 91,099,716UniSTSRGSC3.4
RGSC_v3.41040,116,482 - 40,116,614UniSTSRGSC3.4
Celera1038,175,407 - 38,175,539UniSTS
Celera185,618,977 - 85,619,109UniSTS
Cytogenetic Map10q22UniSTS
Is Marker For: Genes:   Cdc42se2  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GGAGGGTTCCAATAAGGTC
Reverse Primer GAGTTCCCAAGGTTTACAATC
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
2318957Cdc42se2-ps1CDC42 small effector 2, pseudogene 119128740091290387Rat
RefSeq Transcripts NM_001126089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC129107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC169039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 38 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)178479925123479925Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
2300324Fetw1Fetal weight QTL 112.10.005fetal growth trait (VT:0004201)fetal body weight (CMO:0002080)185424647100358001Rat
1300121Hrtrt1Heart rate QTL 13.7heart pumping trait (VT:2000009)heart rate (CMO:0000002)165789093115540829Rat

1 to 10 of 38 rows


Database
Acc Id
Source(s)
NCBI Gene 691031 UniSTS