UniSTS:236220 Marker Search Result - Rat Genome Database

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Marker: UniSTS:236220

Symbol: UniSTS:236220
Previously known as:
RGD ID: 5500023
Expected Size: 219 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2896,264,695 - 96,264,914 (+)MAPPERmRatBN7.2
Rnor_6.08103,505,355 - 103,505,573NCBIRnor6.0
Rnor_5.08102,956,351 - 102,956,569UniSTSRnor5.0
RGSC_v3.48100,771,754 - 100,771,972UniSTSRGSC3.4
Celera895,712,248 - 95,712,466UniSTS
Cytogenetic Map8q31UniSTS
Is Marker For: Genes:   Trpc1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer AAACAATTACACAAAAGCCATTCTT
Reverse Primer TAAAATGGAGTGGGCCATGT
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
619783Trpc1transient receptor potential cation channel, subfamily C, member 189626332296314220Rat
RefSeq Transcripts NM_053558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF061266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FT169642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 44 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
12879878Bw183Body weight QTL 1830.001body mass (VT:0001259)body weight (CMO:0000012)84329616998968765Rat
1300177Cm2Cardiac mass QTL 23.65heart mass (VT:0007028)heart weight (CMO:0000017)854259986100382532Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
12879879Cm99Cardiac mass QTL 990.001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)84329616998968765Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
12879880Cm100Cardiac mass QTL 1000.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)84329616998968765Rat
12879881Cm101Cardiac mass QTL 1010.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)84329616998968765Rat
12879882Am8Aortic mass QTL 80.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)84329616998968765Rat

1 to 10 of 44 rows


Database
Acc Id
Source(s)
NCBI Gene 89821 UniSTS