Gene: Trpc1 (transient receptor potential cation channel, subfamily C, member 1) Rattus norvegicus
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Symbol: Trpc1
Name: transient receptor potential cation channel, subfamily C, member 1
Description: ENCODES a protein that exhibits cation channel activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); ion channel binding (ortholog); INVOLVED IN cellular response to hypoxia; melanin biosynthetic process (ortholog); positive regulation of release of sequestered calcium ion into cytosol (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; glutamate signaling pathway; ASSOCIATED WITH Diabetic Nephropathies; Experimental Diabetes Mellitus; Hyperalgesia; FOUND IN basolateral plasma membrane (ortholog); costamere (ortholog); cytoplasm (ortholog); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; bisphenol A; calcium atom
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: short transient receptor potential channel 1; transient receptor protein 1; TRP-1; Trrp1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08103,503,982 - 103,554,905 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08102,955,430 - 103,005,377 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.08102,953,764 - 102,954,177 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48100,770,833 - 100,821,420NCBIRGSC3.4rn4RGSC3.4
Celera895,710,876 - 95,759,508 (-)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Trpc1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619783
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2018-07-10
Status: ACTIVE