RH142379 Marker Search Result - Rat Genome Database

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Marker: RH142379

Symbol: RH142379
Previously known as:
RGD ID: 5028801
Expected Size: 167 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21371,561,260 - 71,561,427 (+)MAPPERmRatBN7.2
Rnor_6.01377,075,152 - 77,075,318NCBIRnor6.0
Rnor_5.01381,985,632 - 81,985,798UniSTSRnor5.0
RGSC_v3.41374,965,519 - 74,965,685UniSTSRGSC3.4
Celera1371,371,276 - 71,371,442UniSTS
Cytogenetic Map13q22UniSTS
Is Marker For: Genes:   Cop1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CACTGCCAACAGCAAAGTTCATA
Reverse Primer GTCTGCAGCTGATGATGAGAAGA
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1304773Cop1COP1, E3 ubiquitin ligase137146716471561826Rat
RefSeq Transcripts NM_001025126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC091284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 33 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133466346187525369Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)136906051977046890Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)136906051986800898Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)136906051986800898Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat

1 to 10 of 33 rows


Database
Acc Id
Source(s)
NCBI Gene 360860 UniSTS