D4Got150 Marker Search Result - Rat Genome Database

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Marker: D4Got150

Symbol: D4Got150
Previously known as: oxsts2026; OT85.36; 
RGD ID: 43837
Expected Size: 88 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24129,667,204 - 129,667,292 (+)MAPPERmRatBN7.2
Rnor_6.04129,426,207 - 129,426,294NCBIRnor6.0
Rnor_5.04193,929,532 - 193,929,619UniSTSRnor5.0
RGSC_v3.44131,779,732 - 131,779,820RGDRGSC3.4
RGSC_v3.44131,779,733 - 131,779,820UniSTSRGSC3.4
RGSC_v3.14132,024,574 - 132,024,661RGD
Celera4118,543,514 - 118,543,601UniSTS
RH 3.4 Map4794.3UniSTS
RH 3.4 Map4794.3RGD
RH 2.0 Map4869.5RGD
Cytogenetic Map4q34UniSTS
Is Marker For: Genes:   Tafa4  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. UniSTS Pipeline RGD automated pipelines
4. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
5. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8


 
Forward Primer GCACGCGTGCATGTATGT
Reverse Primer CTGACCACACACGCACATG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1597443Tafa4TAFA chemokine like family member 44129437466129671320Rat
GenBank Nucleotide AU028452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 50 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat

1 to 10 of 50 rows


Database
Acc Id
Source(s)
NCBI Gene 689043 UniSTS