Myadm (myeloid-associated differentiation marker) - Rat Genome Database

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Gene: Myadm (myeloid-associated differentiation marker) Rattus norvegicus
Analyze
Symbol: Myadm
Name: myeloid-associated differentiation marker
RGD ID: 727835
Description: Predicted to be involved in several processes, including negative regulation of actin filament polymerization; negative regulation of heterotypic cell-cell adhesion; and positive regulation of substrate adhesion-dependent cell spreading. Predicted to be located in cortical actin cytoskeleton; membrane raft; and ruffle. Predicted to be active in cell-cell junction and plasma membrane. Orthologous to human MYADM (myeloid associated differentiation marker); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: myeloid up-regulated protein
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8174,779,616 - 74,796,752 (-)NCBIGRCr8
mRatBN7.2165,864,180 - 65,874,701 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl165,864,173 - 65,874,035 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx171,312,366 - 71,320,711 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0179,735,339 - 79,743,684 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0173,068,572 - 73,076,904 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0164,438,465 - 64,448,332 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl164,438,472 - 64,446,818 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0163,430,406 - 63,440,255 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4164,177,547 - 64,185,893 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1164,255,658 - 64,264,004 (-)NCBI
Celera163,588,895 - 63,597,242 (-)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MyadmRatfamilial cold autoinflammatory syndrome 2  ISOMYADM (Homo sapiens)8554872ClinVar Annotator: match by term: Familial cold autoinflammatory syndrome 2ClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MyadmRatExperimental Liver Cirrhosis  ISOMYADM (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25380136

1 to 20 of 130 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MyadmRat(-)-alpha-phellandrene increases expressionISOMYADM (Homo sapiens)6480464alpha phellandrene results in increased expression of MYADM mRNACTDPMID:25075043
MyadmRat(-)-demecolcine increases expressionISOMYADM (Homo sapiens)6480464Demecolcine results in increased expression of MYADM mRNACTDPMID:23649840
MyadmRat(1->4)-beta-D-glucan multiple interactionsISOMyadm (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of MYADM mRNACTDPMID:36331819
MyadmRat1,2-dimethylhydrazine increases expressionISOMyadm (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of MYADM mRNACTDPMID:22206623
MyadmRat1,2-dimethylhydrazine multiple interactionsISOMyadm (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of MYADM mRNA]CTDPMID:22206623
MyadmRat1-naphthyl isothiocyanate increases expressionEXP 64804641-Naphthylisothiocyanate results in increased expression of MYADM mRNACTDPMID:25380136 and PMID:30723492
MyadmRat17beta-estradiol multiple interactionsISOMYADM (Homo sapiens)6480464EGF protein inhibits the reaction [Estradiol results in decreased expression of MYADM mRNA]CTDPMID:24758408
MyadmRat17beta-estradiol increases expressionISOMYADM (Homo sapiens)6480464Estradiol results in increased expression of MYADM mRNACTDPMID:31614463
MyadmRat17beta-estradiol decreases expressionISOMyadm (Mus musculus)6480464Estradiol results in decreased expression of MYADM mRNACTDPMID:39298647
MyadmRat17beta-estradiol decreases expressionISOMYADM (Homo sapiens)6480464Estradiol results in decreased expression of MYADM mRNACTDPMID:24758408
MyadmRat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOMYADM (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of MYADM mRNACTDPMID:20106945
MyadmRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of MYADM mRNACTDPMID:34747641
MyadmRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOMyadm (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of MYADM mRNACTDPMID:21570461
MyadmRat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of MYADM mRNACTDPMID:21346803
MyadmRat2-hydroxypropanoic acid affects expressionISOMYADM (Homo sapiens)6480464Lactic Acid affects the expression of MYADM mRNACTDPMID:30851411
MyadmRat2-methylcholine affects expressionISOMYADM (Homo sapiens)6480464beta-methylcholine affects the expression of MYADM mRNACTDPMID:21179406
MyadmRat3H-1,2-dithiole-3-thione decreases expressionEXP 64804641 and 2-dithiol-3-thione results in decreased expression of MYADM mRNACTDPMID:19162173
MyadmRat4,4'-diaminodiphenylmethane increases expressionEXP 64804644 and 4'-diaminodiphenylmethane results in increased expression of MYADM mRNACTDPMID:25380136
MyadmRat4,4'-sulfonyldiphenol increases expressionISOMyadm (Mus musculus)6480464bisphenol S results in increased expression of MYADM mRNACTDPMID:30951980
MyadmRat4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of MYADM mRNACTDPMID:36041667

1 to 20 of 130 rows

Biological Process
1 to 20 of 21 rows

  
Object Symbol
Species
Term
Qualifier
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Reference
Notes
Source
Original Reference(s)
MyadmRatcell-cell junction maintenance NOT|involved_inISOMYADM (Homo sapiens)1624291 PMID:23264465RGDPMID:23264465
MyadmRatestablishment of endothelial barrier involved_inISOMYADM (Homo sapiens)1624291 PMID:23264465RGDPMID:23264465
MyadmRatestablishment of endothelial barrier involved_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatintracellular signal transduction involved_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatintracellular signal transduction involved_inISOMYADM (Homo sapiens)1624291 PMID:23264465RGDPMID:23264465
MyadmRatmembrane raft organization involved_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatmembrane raft organization involved_inISOMYADM (Homo sapiens)1624291 PMID:21325632RGDPMID:21325632
MyadmRatnegative regulation of actin filament polymerization involved_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatnegative regulation of actin filament polymerization involved_inISOMYADM (Homo sapiens)1624291 PMID:23264465RGDPMID:23264465
MyadmRatnegative regulation of gene expression involved_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatnegative regulation of gene expression involved_inISOMYADM (Homo sapiens)1624291 PMID:23264465RGDPMID:23264465
MyadmRatnegative regulation of heterotypic cell-cell adhesion involved_inISOMYADM (Homo sapiens)1624291 PMID:23264465RGDPMID:23264465
MyadmRatnegative regulation of heterotypic cell-cell adhesion involved_inIBAPANTHER:PTN000424812 and UniProtKB:Q96S971600115GO_REF:0000033GO_CentralGO_REF:0000033
MyadmRatnegative regulation of heterotypic cell-cell adhesion involved_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatpositive regulation of cell migration involved_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatpositive regulation of cell migration involved_inISOMYADM (Homo sapiens)1624291 PMID:21325632RGDPMID:21325632
MyadmRatpositive regulation of substrate adhesion-dependent cell spreading involved_inISOMYADM (Homo sapiens)1624291 PMID:21325632RGDPMID:21325632
MyadmRatpositive regulation of substrate adhesion-dependent cell spreading involved_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatprotein localization to plasma membrane raft involved_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatprotein localization to plasma membrane raft involved_inISOMYADM (Homo sapiens)1624291 PMID:21325632RGDPMID:21325632
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Cellular Component
1 to 16 of 16 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MyadmRatcell-cell junction located_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatcell-cell junction is_active_inIBAPANTHER:PTN000424811 and UniProtKB:Q96S971600115GO_REF:0000033GO_CentralGO_REF:0000033
MyadmRatcell-cell junction located_inISOMYADM (Homo sapiens)1624291 PMID:23264465RGDPMID:23264465
MyadmRatcortical actin cytoskeleton located_inISOMYADM (Homo sapiens)1624291 PMID:21325632 and PMID:23264465RGDPMID:21325632 and PMID:23264465
MyadmRatcortical actin cytoskeleton located_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
MyadmRatmembrane located_inIEAUniRule:UR0004132531600115GO_REF:0000104UniProtGO_REF:0000104
MyadmRatmembrane located_inIEAInterPro:IPR0082531600115GO_REF:0000002InterProGO_REF:0000002
MyadmRatmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
MyadmRatmembrane raft located_inISOMYADM (Homo sapiens)1624291 PMID:21325632 and PMID:23264465RGDPMID:21325632 and PMID:23264465
MyadmRatmembrane raft located_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatplasma membrane located_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatplasma membrane is_active_inIBAPANTHER:PTN000424811 and UniProtKB:Q96S971600115GO_REF:0000033GO_CentralGO_REF:0000033
MyadmRatplasma membrane located_inISOMYADM (Homo sapiens)1624291 PMID:21325632 and PMID:23264465RGDPMID:21325632 and PMID:23264465
MyadmRatruffle located_inIEAUniProtKB:Q96S97 and ensembl:ENSP000003756501600115GO_REF:0000107EnsemblGO_REF:0000107
MyadmRatruffle located_inISOMYADM (Homo sapiens)1624291 PMID:21325632RGDPMID:21325632
1 to 16 of 16 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
MyadmRatprotein binding enablesISOMYADM (Homo sapiens)1624291UniProtKB:P11912 more ...RGDPMID:28514442 more ...


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. NCBI rat LocusLink and RefSeq merged data October 15, 2003 NCBI rat LocusLink and RefSeq merged data October 15, 2003
4. Isolation of MYADM, a novel hematopoietic-associated marker gene expressed in multipotent progenitor cells and up-regulated during myeloid differentiation. Pettersson M, etal., J Leukoc Biol 2000 Mar;67(3):423-31.
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Identification of hypertension-related genes through an integrated genomic-transcriptomic approach. Yagil C, etal., Circ Res. 2005 Apr 1;96(6):617-25. Epub 2005 Feb 24.
PMID:12477932   PMID:21325632   PMID:23264465   PMID:23376485   PMID:29476059   PMID:30361391   PMID:31505169  



Myadm
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8174,779,616 - 74,796,752 (-)NCBIGRCr8
mRatBN7.2165,864,180 - 65,874,701 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl165,864,173 - 65,874,035 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx171,312,366 - 71,320,711 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0179,735,339 - 79,743,684 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0173,068,572 - 73,076,904 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0164,438,465 - 64,448,332 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl164,438,472 - 64,446,818 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0163,430,406 - 63,440,255 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4164,177,547 - 64,185,893 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1164,255,658 - 64,264,004 (-)NCBI
Celera163,588,895 - 63,597,242 (-)NCBICelera
Cytogenetic Map1q12NCBI
MYADM
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381953,865,628 - 53,876,435 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1953,864,763 - 53,878,125 (+)EnsemblGRCh38hg38GRCh38
GRCh371954,368,882 - 54,379,689 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361959,061,423 - 59,071,501 (+)NCBINCBI36Build 36hg18NCBI36
Build 341959,062,948 - 59,070,607NCBI
Celera1951,410,687 - 51,420,740 (+)NCBICelera
Cytogenetic Map19q13.42NCBI
HuRef1950,688,935 - 50,698,996 (+)NCBIHuRef
CHM1_11954,371,421 - 54,381,447 (+)NCBICHM1_1
T2T-CHM13v2.01956,945,407 - 56,956,143 (+)NCBIT2T-CHM13v2.0
Myadm
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3973,337,563 - 3,347,871 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl73,337,605 - 3,348,958 (+)EnsemblGRCm39 Ensembl
GRCm3873,289,038 - 3,299,355 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl73,289,080 - 3,300,442 (+)EnsemblGRCm38mm10GRCm38
MGSCv3773,289,039 - 3,299,350 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera73,239,892 - 3,250,194 (+)NCBICelera
Cytogenetic Map7A1NCBI
cM Map71.92NCBI
Myadm
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955604280,977 - 284,381 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955604280,977 - 284,381 (-)NCBIChiLan1.0ChiLan1.0
MYADM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22059,878,608 - 59,888,754 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11961,800,611 - 61,810,691 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01950,807,615 - 50,817,196 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11959,656,521 - 59,666,643 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1959,663,790 - 59,664,758 (+)Ensemblpanpan1.1panPan2
MYADM
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11103,315,606 - 103,322,329 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1103,381,284 - 103,388,479 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01103,969,865 - 103,977,066 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1103,970,647 - 103,977,121 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11103,602,297 - 103,609,488 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01103,364,030 - 103,371,220 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01104,083,017 - 104,090,213 (-)NCBIUU_Cfam_GSD_1.0
Myadm
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244093492,854,208 - 2,858,812 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493699480,439 - 83,536 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493699478,989 - 83,536 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYADM
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl656,236,311 - 56,244,185 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1656,236,306 - 56,278,577 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2652,971,110 - 52,978,880 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MYADM
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1646,559,943 - 46,568,057 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl646,566,968 - 46,567,936 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607326,638,157 - 26,648,060 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Myadm
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248322,568,128 - 2,573,544 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248322,568,128 - 2,574,248 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Myadm
63 total Variants

Predicted Target Of
Summary Value
Count of predictions:759
Count of miRNA genes:278
Interacting mature miRNAs:344
Transcripts:ENSRNOT00000022264
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 46 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)13523959878430678Rat
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15389511782174945Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)13523959878430678Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)11148131282174945Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat

1 to 10 of 46 rows
RH133928  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2165,864,351 - 65,864,562 (+)MAPPERmRatBN7.2
Rnor_6.0164,438,635 - 64,438,845NCBIRnor6.0
Rnor_5.0163,430,576 - 63,430,786UniSTSRnor5.0
RGSC_v3.4164,177,711 - 64,177,921UniSTSRGSC3.4
Celera163,589,059 - 63,589,269UniSTS
RH 3.4 Map1739.1UniSTS
RH 3.4 Map1732.0UniSTS
Cytogenetic Map1q12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000081980   ⟹   ENSRNOP00000074552
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl165,864,176 - 65,874,035 (-)Ensembl
Rnor_6.0 Ensembl164,438,472 - 64,446,818 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000117211   ⟹   ENSRNOP00000095076
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl165,864,185 - 65,870,435 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119431   ⟹   ENSRNOP00000094663
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl165,864,173 - 65,872,481 (-)Ensembl
RefSeq Acc Id: NM_183332   ⟹   NP_899161
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8174,779,616 - 74,787,963 (-)NCBI
mRatBN7.2165,864,188 - 65,872,535 (-)NCBI
Rnor_6.0164,438,471 - 64,446,818 (-)NCBI
Rnor_5.0163,430,406 - 63,440,255 (-)NCBI
RGSC_v3.4164,177,547 - 64,185,893 (-)RGD
Celera163,588,895 - 63,597,242 (-)RGD
Sequence:
RefSeq Acc Id: XM_006228035   ⟹   XP_006228097
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8174,779,616 - 74,796,752 (-)NCBI
mRatBN7.2165,864,180 - 65,874,701 (-)NCBI
Rnor_6.0164,438,465 - 64,448,332 (-)NCBI
Rnor_5.0163,430,406 - 63,440,255 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039085873   ⟹   XP_038941801
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8174,779,616 - 74,787,891 (-)NCBI
mRatBN7.2165,864,180 - 65,872,483 (-)NCBI
RefSeq Acc Id: XM_063270027   ⟹   XP_063126097
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8174,779,616 - 74,786,857 (-)NCBI
RefSeq Acc Id: NP_899161   ⟸   NM_183332
- UniProtKB: Q6VBQ5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006228097   ⟸   XM_006228035
- Peptide Label: isoform X1
- UniProtKB: Q05BA4 (UniProtKB/TrEMBL),   A6KS43 (UniProtKB/TrEMBL),   A0A0G2K8C4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074552   ⟸   ENSRNOT00000081980
RefSeq Acc Id: XP_038941801   ⟸   XM_039085873
- Peptide Label: isoform X1
- UniProtKB: Q05BA4 (UniProtKB/TrEMBL),   A6KS43 (UniProtKB/TrEMBL),   A0A0G2K8C4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000094663   ⟸   ENSRNOT00000119431
MARVEL

Name Modeler Protein Id AA Range Protein Structure
AF-Q6VBQ5-F1-model_v2 AlphaFold Q6VBQ5 1-318 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13689667
Promoter ID:EPDNEW_R192
Type:initiation region
Name:Myadm_1
Description:myeloid-associated differentiation marker
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0164,446,755 - 64,446,815EPDNEW


1 to 26 of 26 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-61015 BioCyc
Ensembl Genes ENSRNOG00000053450 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000081980 ENTREZGENE
  ENSRNOT00000117211 ENTREZGENE
  ENSRNOT00000119431 ENTREZGENE
IMAGE_CLONE IMAGE:7123822 IMAGE-MGC_LOAD
  IMAGE:7315920 IMAGE-MGC_LOAD
  IMAGE:7932126 IMAGE-MGC_LOAD
InterPro Marvel UniProtKB/Swiss-Prot
  MYADM-like UniProtKB/Swiss-Prot
KEGG Report rno:369016 UniProtKB/Swiss-Prot
MGC_CLONE MGC:124542 IMAGE-MGC_LOAD
  MGC:156559 IMAGE-MGC_LOAD
  MGC:94064 IMAGE-MGC_LOAD
NCBI Gene 369016 ENTREZGENE
PANTHER MYELOID-ASSOCIATED DIFFERENTIATION MARKER UniProtKB/Swiss-Prot
  MYELOID-ASSOCIATED DIFFERENTIATION MARKER MYADM FAMILY MEMBER UniProtKB/Swiss-Prot
Pfam MARVEL UniProtKB/Swiss-Prot
PhenoGen Myadm PhenoGen
PROSITE MARVEL UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000053450 RatGTEx
UniProt A0A0G2K8C4 ENTREZGENE, UniProtKB/TrEMBL
  A6KS43 ENTREZGENE
  MYADM_RAT UniProtKB/Swiss-Prot
  Q05BA4 ENTREZGENE, UniProtKB/TrEMBL
  Q6VBQ5 ENTREZGENE
1 to 26 of 26 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-07-08 Myadm  myeloid-associated differentiation marker      Symbol and Name status set to approved 1299863 APPROVED

Note Type Note Reference
gene_disease identified as a possible hypertension gene 1559295