Aqp9 (aquaporin 9) - Rat Genome Database

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Gene: Aqp9 (aquaporin 9) Rattus norvegicus
Analyze
Symbol: Aqp9
Name: aquaporin 9
RGD ID: 68433
Description: Enables channel activity and nucleobase transmembrane transporter activity. Involved in several processes, including canalicular bile acid transport; nucleobase transport; and response to pain. Located in basolateral plasma membrane. Orthologous to human AQP9 (aquaporin 9); PARTICIPATES IN water transport pathway; bile acid transport pathway; INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: AQP-9; aquaglyceroporin-9; aquaporin-9; MGC93419; neutral solute channel aquaporin 9
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8880,678,027 - 80,718,273 (-)NCBIGRCr8
mRatBN7.2871,797,231 - 71,837,485 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl871,797,234 - 71,837,395 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx877,331,526 - 77,371,805 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0875,604,495 - 75,644,778 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0873,441,536 - 73,481,821 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0877,559,621 - 77,599,781 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl877,559,624 - 77,599,781 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0875,483,006 - 75,523,423 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4875,611,485 - 75,651,646 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1875,630,541 - 75,670,700 (-)NCBI
Celera869,899,442 - 69,939,523 (+)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
Aqp9RatNeuralgia amelioratesIMP 152995474 RGD 
Aqp9RatOptic Nerve Injuries  IEP 2326035 RGD 
Object Symbol
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Original Reference(s)
Aqp9RatBloom syndrome  ISOAQP9 (Homo sapiens)8554872ClinVar Annotator: match by term: Bloom syndromeClinVarPMID:28492532
Aqp9Ratcolorectal cancer  ISOAQP9 (Homo sapiens)8554872ClinVar Annotator: match by term: Familial colorectal cancerClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
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Original Reference(s)
Aqp9Ratacute myeloid leukemia  ISOAQP9 (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:16968895
Aqp9Ratacute promyelocytic leukemia  ISOAQP9 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:23563754
Aqp9RatArsenic Poisoning  ISOAQP9 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19805235
Aqp9Ratautism spectrum disorder  ISOAQP9 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:35663546
Aqp9Ratjuvenile rheumatoid arthritis  ISOAQP9 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19565504
Aqp9Ratleukemia  ISOAQP9 (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:15336539
Aqp9RatMPTP Poisoning  ISOAQP9 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:29566083

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Original Reference(s)
Aqp9Rat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of AQP9 mRNA]CTDPMID:31150632
Aqp9Rat(-)-demecolcine increases expressionISOAQP9 (Homo sapiens)6480464Demecolcine results in increased expression of AQP9 mRNACTDPMID:23649840
Aqp9Rat(1->4)-beta-D-glucan multiple interactionsISOAqp9 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of AQP9 mRNACTDPMID:36331819
Aqp9Rat17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of AQP9 mRNACTDPMID:17108234
Aqp9Rat17beta-estradiol multiple interactionsEXP 6480464[Estradiol results in decreased expression of AQP9 mRNA] which results in decreased uptake of Glycerol and Isoflavones inhibits the reaction [Estradiol results in increased expression of AQP9 mRNA]CTDPMID:20381596 and PMID:22114114
Aqp9Rat17beta-estradiol increases expressionISOAqp9 (Mus musculus)6480464Estradiol results in increased expression of AQP9 mRNACTDPMID:39298647
Aqp9Rat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of AQP9 mRNACTDPMID:22114114
Aqp9Rat17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of AQP9 mRNA and Estradiol results in increased expression of AQP9 proteinCTDPMID:17026757 and PMID:20381596
Aqp9Rat17beta-hydroxy-5alpha-androstan-3-one increases expressionEXP 6480464Dihydrotestosterone results in increased expression of AQP9 mRNA and Dihydrotestosterone results in increased expression of AQP9 proteinCTDPMID:17026757
Aqp9Rat17beta-hydroxy-5alpha-androstan-3-one multiple interactionsISOAQP9 (Homo sapiens)64804642-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one inhibits the reaction [Dihydrotestosterone results in decreased expression of AQP9 mRNA]CTDPMID:20378617
Aqp9Rat17beta-hydroxy-5alpha-androstan-3-one decreases expressionISOAQP9 (Homo sapiens)6480464Dihydrotestosterone results in decreased expression of AQP9 mRNA and Dihydrotestosterone results in decreased expression of AQP9 proteinCTDPMID:20378617
Aqp9Rat2,2',4,4'-Tetrabromodiphenyl ether affects expressionISOAqp9 (Mus musculus)64804642 more ...CTDPMID:30294300
Aqp9Rat2,3,4,7,8-Pentachlorodibenzofuran decreases expressionEXP 64804642 more ...CTDPMID:21724226
Aqp9Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOAqp9 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of AQP9 mRNACTDPMID:18796159
Aqp9Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOAQP9 (Homo sapiens)6480464[Endosulfan co-treated with Tetrachlorodibenzodioxin] results in decreased expression of AQP9 mRNACTDPMID:26159488
Aqp9Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOAQP9 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in decreased expression of AQP9 mRNACTDPMID:20106945 and PMID:26159488
Aqp9Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of AQP9 mRNACTDPMID:19490992 more ...
Aqp9Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOAqp9 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of AQP9 mRNACTDPMID:21570461
Aqp9Rat2,3,7,8-Tetrachlorodibenzofuran decreases expressionEXP 64804642 more ...CTDPMID:21724226
Aqp9Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOAqp9 (Mus musculus)64804642 more ...CTDPMID:38648751

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Biological Process
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Original Reference(s)
Aqp9Ratamine transport involved_inIDA 68217PMID:9733774UniProt 
Aqp9Ratcanalicular bile acid transport  IDA 625402 RGD 
Aqp9Ratcellular response to cAMP involved_inISOAQP9 (Homo sapiens)1624291 PMID:17636236RGDPMID:17636236
Aqp9Ratdetoxification of arsenic-containing substance involved_inISOAqp9 (Mus musculus)1624291 PMID:19805235RGDPMID:19805235
Aqp9Ratdetoxification of arsenic-containing substance involved_inISSUniProtKB:Q9JJJ31600115GO_REF:0000024UniProtGO_REF:0000024
Aqp9Ratglycerol transmembrane transport involved_inISSUniProtKB:O433151600115GO_REF:0000024UniProtGO_REF:0000024
Aqp9Ratglycerol transmembrane transport involved_inIBAMGI:1314647 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Aqp9Ratglycerol transmembrane transport involved_inISOAQP9 (Homo sapiens)1624291 PMID:30420639RGDPMID:30420639
Aqp9Rathydrogen peroxide transmembrane transport involved_inIEAGO:01400701600115GO_REF:0000108GOCGO_REF:0000108
Aqp9Ratpolyol transmembrane transport involved_inIDA 68217PMID:9733774UniProt 
Aqp9Ratpurine nucleobase transmembrane transport involved_inIEAGO:00053451600115GO_REF:0000108GOCGO_REF:0000108
Aqp9Ratpurine nucleobase transport involved_inIDA 68217PMID:9733774UniProt 
Aqp9Ratpyrimidine nucleobase transport involved_inIDA 68217PMID:9733774UniProt 
Aqp9Ratpyrimidine-containing compound transmembrane transport involved_inIEAGO:00053501600115GO_REF:0000108GOCGO_REF:0000108
Aqp9Ratresponse to osmotic stress involved_inTAS 68217PMID:9733774UniProt 
Aqp9Ratresponse to pain  IMP 152995474 RGD 
Aqp9Rattransmembrane transport involved_inIEAInterPro:IPR0004251600115GO_REF:0000002InterProGO_REF:0000002
Aqp9Raturea transmembrane transport involved_inISSUniProtKB:O433151600115GO_REF:0000024UniProtGO_REF:0000024
Aqp9Raturea transmembrane transport involved_inISOAQP9 (Homo sapiens)1624291 PMID:9514918RGDPMID:9514918
Aqp9Ratwater transport  IDA 625402 RGD 
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Cellular Component
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Original Reference(s)
Aqp9Ratbasolateral plasma membrane  IDA 625402 RGD 
Aqp9Ratbasolateral plasma membrane is_active_inIBAMGI:1333777 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Aqp9Ratbasolateral plasma membrane located_inIEAUniProtKB-SubCell:SL-00261600115GO_REF:0000044UniProtGO_REF:0000044
Aqp9Ratbasolateral plasma membrane located_inISOAqp9 (Mus musculus)1624291 PMID:23042941RGDPMID:23042941
Aqp9Ratintracellular membrane-bounded organelle located_inISOAQP9 (Homo sapiens)1624291 PMID:18718702RGDPMID:18718702
Aqp9Ratmembrane located_inNAS 68217PMID:9733774UniProt 
Aqp9Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Aqp9Ratmembrane located_inIEAInterPro:IPR0004251600115GO_REF:0000002InterProGO_REF:0000002
Aqp9Ratplasma membrane is_active_inISOAQP9 (Homo sapiens)1624291 PMID:9514918RGDPMID:9514918
Aqp9Ratplasma membrane located_inIEAARBA:ARBA000278011600115GO_REF:0000117UniProtGO_REF:0000117
Aqp9Ratplasma membrane located_inIEAUniProtKB-SubCell:SL-00391600115GO_REF:0000044UniProtGO_REF:0000044
Aqp9Ratplasma membrane located_inIEAUniProtKB-KW:KW-10031600115GO_REF:0000043UniProtGO_REF:0000043
Aqp9Ratplasma membrane is_active_inIBAMGI:1314647 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Aqp9Ratplasma membrane is_active_inISSUniProtKB:O433151600115GO_REF:0000024UniProtGO_REF:0000024
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Molecular Function
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Original Reference(s)
Aqp9Ratchannel activity enablesISOAqp9 (Mus musculus)1624291 PMID:11972053RGDPMID:11972053
Aqp9Ratchannel activity enablesIEAInterPro:IPR0004251600115GO_REF:0000002InterProGO_REF:0000002
Aqp9Ratchannel activity enablesISOAQP9 (Homo sapiens)1624291 PMID:10564231 and PMID:35054513RGDPMID:10564231 and PMID:35054513
Aqp9Ratglycerol channel activity enablesISOAQP9 (Homo sapiens)1624291 PMID:10564231 more ...RGDPMID:10564231 more ...
Aqp9Ratglycerol channel activity enablesIBAPANTHER:PTN000440994 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Aqp9Ratglycerol channel activity NOT|enablesISOAQP9 (Homo sapiens)1624291 PMID:9514918RGDPMID:9514918
Aqp9Ratglycerol channel activity enablesIDA 408345202PMID:10205677UniProt 
Aqp9Rathydrogen peroxide channel activity enablesISOAqp9 (Mus musculus)1624291 PMID:26837049RGDPMID:26837049
Aqp9Rathydrogen peroxide channel activity enablesISOAQP9 (Homo sapiens)1624291 PMID:26837049RGDPMID:26837049
Aqp9Rathydrogen peroxide channel activity enablesISSUniProtKB:O433151600115GO_REF:0000024UniProtGO_REF:0000024
Aqp9Ratpolyol transmembrane transporter activity enablesIDA 68217PMID:9733774UniProt 
Aqp9Ratprotein binding  IPICftr (Rattus norvegicus)11567217 RGD 
Aqp9Ratprotein binding enablesISOAQP9 (Homo sapiens)1624291UniProtKB:O75084 more ...RGDPMID:25416956 and PMID:32296183
Aqp9Ratpurine nucleobase transmembrane transporter activity enablesIDA 68217PMID:9733774UniProt 
Aqp9Ratpyrimidine nucleobase transmembrane transporter activity enablesIDA 68217PMID:9733774UniProt 
Aqp9Raturea channel activity enablesISOAqp9 (Mus musculus)1624291 PMID:23042941RGDPMID:23042941
Aqp9Raturea channel activity enablesISOAQP9 (Homo sapiens)1624291 PMID:10564231 and PMID:9514918RGDPMID:10564231 and PMID:9514918
Aqp9Raturea channel activity enablesIDA 408345202PMID:10205677UniProt 
Aqp9Raturea transmembrane transporter activity enablesIDA 68217PMID:9733774UniProt 
Aqp9Ratwater channel activity  IDA 625402 RGD 
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RGD Manual Annotations


  
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Original Reference(s)
Aqp9Ratwater transport pathway  ISOAQP9 (Homo sapiens)2312795 RGD 

Imported Annotations - KEGG (archival)

Object Symbol
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Original Reference(s)
Aqp9Ratbile acid transport pathway  IEA 6907045 KEGGrno:04976

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#
Reference Title
Reference Citation
1. Expression and regulation of aquaporins 1, 8, and 9 in the testis, efferent ducts, and epididymis of adult rats and during postnatal development. Badran HH and Hermo LS, J Androl 2002 May-Jun;23(3):358-73.
2. Changes in ocular aquaporin expression following optic nerve crush. Dibas A, etal., Mol Vis. 2010 Mar 3;16:330-40.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. Expression and localization of aquaporin water channels in rat hepatocytes. Evidence for a role in canalicular bile secretion. Huebert RC, etal., J Biol Chem 2002 Jun 21;277(25):22710-7.
6. Aquaporin-9 is expressed in rat Sertoli cells and interacts with the cystic fibrosis transmembrane conductance regulator. Jesus TT, etal., IUBMB Life. 2014 Sep;66(9):639-44. doi: 10.1002/iub.1312. Epub 2014 Oct 1.
7. Cloning and functional expression of rAOP9L a new member of aquaporin family from rat liver. Ko SB, etal., Biochem Mol Biol Int. 1999 Feb;47(2):309-18. doi: 10.1080/15216549900201333.
8. Aquaporins in the kidney. Kwon TH, etal., Handb Exp Pharmacol. 2009;(190):95-132. doi: 10.1007/978-3-540-79885-9_5.
9. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
10. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
11. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
12. Expression of aquaporin 9 in the adult rat epididymal epithelium is modulated by androgens. Pastor-Soler N, etal., Biol Reprod 2002 Jun;66(6):1716-22.
13. At low doses ethanol maintains blood-brain barrier (BBB) integrity after hypoxia and reoxygenation: a brain slice study. Peng C, etal., Neurol Res. 2013 Oct;35(8):790-7. doi: 10.1179/1743132813Y.0000000198. Epub 2013 Apr 12.
14. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
15. GOA pipeline RGD automated data pipeline
16. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
17. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
18. Molecular characterization of a broad selectivity neutral solute channel. Tsukaguchi H, etal., J Biol Chem 1998 Sep 18;273(38):24737-43.
19. LncRNA MALAT1 promotes neuropathic pain progression through the miR‑154‑5p/AQP9 axis in CCI rat models. Wu J, etal., Mol Med Rep. 2020 Jan;21(1):291-303. doi: 10.3892/mmr.2019.10829. Epub 2019 Nov 20.
1 to 19 of 19 rows
PMID:1373524   PMID:1510932   PMID:7530250   PMID:9369468   PMID:9405233   PMID:9514918   PMID:9806845   PMID:9829975   PMID:10318966   PMID:10510269   PMID:10564231   PMID:11001937  
PMID:11034202   PMID:11076974   PMID:11573934   PMID:11972053   PMID:12084581   PMID:12477932   PMID:12594337   PMID:12944406   PMID:14701836   PMID:15489334   PMID:15647391   PMID:15850448  
PMID:15948717   PMID:16446030   PMID:16596446   PMID:16857339   PMID:17178220   PMID:17337204   PMID:17525633   PMID:17636236   PMID:18053968   PMID:18055461   PMID:18202181   PMID:18501347  
PMID:18511455   PMID:18669624   PMID:18718702   PMID:18762715   PMID:19115411   PMID:19193945   PMID:19399395   PMID:19429018   PMID:19948840   PMID:20357197   PMID:20958229   PMID:21208160  
PMID:21251984   PMID:21851171   PMID:22114114   PMID:23040263   PMID:23415870   PMID:23464865   PMID:23506846   PMID:24828425   PMID:25479407   PMID:25604497   PMID:25903824   PMID:29523003  
PMID:30017933   PMID:30266683   PMID:30420639   PMID:31218464   PMID:31533210  



Aqp9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8880,678,027 - 80,718,273 (-)NCBIGRCr8
mRatBN7.2871,797,231 - 71,837,485 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl871,797,234 - 71,837,395 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx877,331,526 - 77,371,805 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0875,604,495 - 75,644,778 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0873,441,536 - 73,481,821 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0877,559,621 - 77,599,781 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl877,559,624 - 77,599,781 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0875,483,006 - 75,523,423 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4875,611,485 - 75,651,646 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1875,630,541 - 75,670,700 (-)NCBI
Celera869,899,442 - 69,939,523 (+)NCBICelera
Cytogenetic Map8q24NCBI
AQP9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381558,138,169 - 58,185,911 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1558,138,169 - 58,185,911 (+)EnsemblGRCh38hg38GRCh38
GRCh371558,430,368 - 58,478,110 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361556,217,700 - 56,265,402 (+)NCBINCBI36Build 36hg18NCBI36
Build 341556,217,770 - 56,265,401NCBI
Celera1535,319,964 - 35,368,212 (+)NCBICelera
Cytogenetic Map15q21.3NCBI
HuRef1535,253,376 - 35,301,102 (+)NCBIHuRef
CHM1_11558,548,384 - 58,596,089 (+)NCBICHM1_1
T2T-CHM13v2.01555,940,466 - 55,988,212 (+)NCBIT2T-CHM13v2.0
Aqp9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39971,017,941 - 71,075,170 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl971,017,941 - 71,075,964 (-)EnsemblGRCm39 Ensembl
GRCm38971,110,659 - 71,167,849 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl971,110,659 - 71,168,682 (-)EnsemblGRCm38mm10GRCm38
MGSCv37970,958,468 - 71,011,096 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36970,909,221 - 70,961,849 (-)NCBIMGSCv36mm8
Celera968,318,271 - 68,366,608 (-)NCBICelera
Cytogenetic Map9DNCBI
cM Map939.85NCBI
Aqp9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545016,253,571 - 16,302,657 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545016,253,706 - 16,346,602 (-)NCBIChiLan1.0ChiLan1.0
AQP9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21647,401,033 - 47,449,700 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11551,583,319 - 51,631,999 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01537,107,061 - 37,154,887 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11555,418,767 - 55,466,541 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1555,418,767 - 55,466,541 (+)Ensemblpanpan1.1panPan2
AQP9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13023,223,413 - 23,271,893 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3023,225,331 - 23,269,076 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3023,195,554 - 23,244,048 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03023,381,591 - 23,430,109 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3023,383,410 - 23,429,056 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13023,314,125 - 23,361,613 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03023,398,650 - 23,446,048 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03023,540,476 - 23,589,012 (+)NCBIUU_Cfam_GSD_1.0
Aqp9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640101,473,023 - 101,514,878 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647119,321,426 - 19,362,146 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647119,321,366 - 19,361,227 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AQP9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1113,794,040 - 113,848,683 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11113,798,380 - 113,848,452 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21125,897,935 - 125,959,201 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AQP9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12625,326,108 - 25,374,743 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2625,326,087 - 25,373,336 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048115,941,107 - 115,988,513 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aqp9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478113,648,065 - 13,691,260 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478113,650,612 - 13,691,175 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Aqp9
267 total Variants

Predicted Target Of
Summary Value
Count of predictions:200
Count of miRNA genes:145
Interacting mature miRNAs:158
Transcripts:ENSRNOT00000021442
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 53 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83085640475856404Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)84186687686866876Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84269268490165460Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83173772976737729Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83558203280582032Rat
4889938Bss89Bone structure and strength QTL 893.8tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)85009524982460899Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)830848154101699754Rat

1 to 10 of 53 rows
RH141275  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2871,797,376 - 71,797,582 (+)MAPPERmRatBN7.2
Rnor_6.0877,559,767 - 77,559,972NCBIRnor6.0
Rnor_5.0875,523,072 - 75,523,277UniSTSRnor5.0
RGSC_v3.4875,611,631 - 75,611,836UniSTSRGSC3.4
Celera869,939,172 - 69,939,377UniSTS
Cytogenetic Map8q24UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 8 22 79 88 90 59 25 59 6 183 64 61 44 59 31


1 to 24 of 24 rows
RefSeq Transcripts NM_022960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006243362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039082100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC114842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF016406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 24 of 24 rows

Ensembl Acc Id: ENSRNOT00000087980   ⟹   ENSRNOP00000069377
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl871,797,234 - 71,837,395 (-)Ensembl
Rnor_6.0 Ensembl877,559,624 - 77,599,781 (-)Ensembl
RefSeq Acc Id: NM_022960   ⟹   NP_075249
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,718,188 (-)NCBI
mRatBN7.2871,797,231 - 71,837,395 (-)NCBI
Rnor_6.0877,559,621 - 77,599,781 (-)NCBI
Rnor_5.0875,483,006 - 75,523,423 (+)NCBI
RGSC_v3.4875,611,485 - 75,651,646 (-)RGD
Celera869,899,442 - 69,939,523 (+)RGD
Sequence:
RefSeq Acc Id: XM_006243362   ⟹   XP_006243424
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,718,273 (-)NCBI
mRatBN7.2871,797,231 - 71,837,485 (-)NCBI
Rnor_6.0877,559,621 - 77,598,767 (-)NCBI
Rnor_5.0875,483,006 - 75,523,423 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039082095   ⟹   XP_038938023
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,718,273 (-)NCBI
mRatBN7.2871,797,231 - 71,837,485 (-)NCBI
RefSeq Acc Id: XM_039082096   ⟹   XP_038938024
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,718,254 (-)NCBI
mRatBN7.2871,797,231 - 71,836,728 (-)NCBI
RefSeq Acc Id: XM_039082097   ⟹   XP_038938025
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,718,273 (-)NCBI
mRatBN7.2871,797,231 - 71,837,485 (-)NCBI
RefSeq Acc Id: XM_039082099   ⟹   XP_038938027
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,718,273 (-)NCBI
mRatBN7.2871,797,231 - 71,837,485 (-)NCBI
RefSeq Acc Id: XM_039082100   ⟹   XP_038938028
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,717,749 (-)NCBI
mRatBN7.2871,797,231 - 71,836,728 (-)NCBI
RefSeq Acc Id: XM_063266081   ⟹   XP_063122151
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,714,765 (-)NCBI
RefSeq Acc Id: XM_063266082   ⟹   XP_063122152
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,717,749 (-)NCBI
RefSeq Acc Id: XM_063266083   ⟹   XP_063122153
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,717,749 (-)NCBI
RefSeq Acc Id: XM_063266084   ⟹   XP_063122154
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,718,273 (-)NCBI
RefSeq Acc Id: XM_063266085   ⟹   XP_063122155
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,714,765 (-)NCBI
RefSeq Acc Id: XM_063266086   ⟹   XP_063122156
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8880,678,027 - 80,714,770 (-)NCBI
1 to 5 of 14 rows
1 to 5 of 14 rows
RefSeq Acc Id: NP_075249   ⟸   NM_022960
- UniProtKB: O88815 (UniProtKB/Swiss-Prot),   P56627 (UniProtKB/Swiss-Prot),   A6KER7 (UniProtKB/TrEMBL),   A6KER9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006243424   ⟸   XM_006243362
- Peptide Label: isoform X1
- UniProtKB: O88815 (UniProtKB/Swiss-Prot),   P56627 (UniProtKB/Swiss-Prot),   A6KER7 (UniProtKB/TrEMBL),   A6KER9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069377   ⟸   ENSRNOT00000087980
RefSeq Acc Id: XP_038938025   ⟸   XM_039082097
- Peptide Label: isoform X1
- UniProtKB: P56627 (UniProtKB/Swiss-Prot),   O88815 (UniProtKB/Swiss-Prot),   A6KER7 (UniProtKB/TrEMBL),   A6KER9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038938023   ⟸   XM_039082095
- Peptide Label: isoform X1
- UniProtKB: P56627 (UniProtKB/Swiss-Prot),   O88815 (UniProtKB/Swiss-Prot),   A6KER7 (UniProtKB/TrEMBL),   A6KER9 (UniProtKB/TrEMBL)

Name Modeler Protein Id AA Range Protein Structure
AF-P56627-F1-model_v2 AlphaFold P56627 1-295 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 31 of 31 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-29903 BioCyc
Ensembl Genes ENSRNOG00000061883 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000087980 ENTREZGENE
  ENSRNOT00000087980.2 UniProtKB/Swiss-Prot
  ENSRNOT00000142448 ENTREZGENE
Gene3D-CATH 1.20.1080.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7134715 IMAGE-MGC_LOAD
InterPro Aquaporin-like UniProtKB/Swiss-Prot
  Aquaporin_9 UniProtKB/Swiss-Prot
  MIP UniProtKB/Swiss-Prot
  MIP/Aquaporin UniProtKB/Swiss-Prot
  MIP_CS UniProtKB/Swiss-Prot
KEGG Report rno:65054 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93419 IMAGE-MGC_LOAD
NCBI Gene 65054 ENTREZGENE
PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED UniProtKB/Swiss-Prot
  PTHR43829:SF6 UniProtKB/Swiss-Prot
Pfam MIP UniProtKB/Swiss-Prot
PhenoGen Aqp9 PhenoGen
PRINTS AQUAPORIN9 UniProtKB/Swiss-Prot
  MINTRINSICP UniProtKB/Swiss-Prot
PROSITE MIP UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000061883 RatGTEx
Superfamily-SCOP SSF81338 UniProtKB/Swiss-Prot
TIGR TC214842
UniProt A6KER7 ENTREZGENE, UniProtKB/TrEMBL
  A6KER9 ENTREZGENE, UniProtKB/TrEMBL
  AQP9_RAT UniProtKB/Swiss-Prot
  O88815 ENTREZGENE
  P56627 ENTREZGENE
UniProt Secondary O88815 UniProtKB/Swiss-Prot
1 to 31 of 31 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-06-10 Aqp9  aquaporin 9      Name updated 70584 APPROVED

Note Type Note Reference
gene_cellular_localization enriched in basolateral plasma membranes of hepatocytes 625402
gene_cellular_localization localized to the apical membrane 727570
gene_expression expressed in epididymal epithelium 727570