Hivep2 (HIVEP zinc finger 2) - Rat Genome Database

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Gene: Hivep2 (HIVEP zinc finger 2) Rattus norvegicus
Analyze
Symbol: Hivep2
Name: HIVEP zinc finger 2
RGD ID: 61988
Description: Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in autosomal dominant intellectual developmental disorder 43. Orthologous to human HIVEP2 (HIVEP zinc finger 2); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: angiotensinogen gene-inducible enhancer-binding protein 1; c-myc intron binding protein 1; DNA-binding protein AGIE-BP1; human immunodeficiency virus type 1 enhancer-binding protein 2; human immunodeficiency virus type I enhancer binding protein 2; human immunodeficiency virus type I enhancer-binding protein 2; human immunodeficiency virus type I enhancer-binding protein 2 homolog; MIBP-1; MIBP1; myc intron-binding protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8110,176,880 - 10,376,089 (+)NCBIGRCr8
mRatBN7.218,358,205 - 8,555,993 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl18,359,289 - 8,555,993 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx18,074,215 - 8,272,890 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0114,073,360 - 14,272,030 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.018,341,455 - 8,537,959 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.018,129,354 - 8,333,890 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl18,310,577 - 8,333,885 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.019,755,847 - 9,953,696 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.418,783,016 - 9,032,351 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.118,783,015 - 9,032,351 (+)NCBI
Celera16,844,547 - 7,040,486 (+)NCBICelera
Cytogenetic Map1p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hivep2Ratautism spectrum disorder  ISOHIVEP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Autism spectrum disorderClinVarPMID:25741868
Hivep2Ratautosomal dominant intellectual developmental disorder 13  ISOHIVEP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disability and autosomal dominant 13ClinVarPMID:25741868
Hivep2Ratautosomal dominant intellectual developmental disorder 43  ISOHIVEP2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:23020937 more ...
Hivep2RatChristianson syndrome  ISOHIVEP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Angelman syndrome-likeClinVarPMID:25741868
Hivep2Ratgenetic disease  ISOHIVEP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:12527760 more ...
Hivep2Ratintellectual disability  ISOHIVEP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:25741868 more ...
Hivep2RatNeurodevelopmental Disorders  ISOHIVEP2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVar 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hivep2RatMyocardial Ischemia  ISOHIVEP2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:16214533
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hivep2Ratintellectual disability  ISSHivep2 (Mus musculus)13592920 MouseDO 
Hivep2Ratschizophrenia  ISSHivep2 (Mus musculus)13592920OMIM:181500MouseDO 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hivep2Ratautosomal dominant intellectual developmental disorder 43  ISOHIVEP2 (Homo sapiens)7240710 OMIM 

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hivep2Rat(-)-epigallocatechin 3-gallate increases expressionISOHIVEP2 (Homo sapiens)6480464epigallocatechin gallate results in increased expression of HIVEP2 mRNACTDPMID:22079256
Hivep2Rat(-)-epigallocatechin 3-gallate multiple interactionsISOHIVEP2 (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of HIVEP2 mRNACTDPMID:22079256
Hivep2Rat(1->4)-beta-D-glucan multiple interactionsISOHivep2 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of HIVEP2 mRNACTDPMID:36331819
Hivep2Rat1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane affects expressionEXP 64804642 more ...CTDPMID:19414516
Hivep2Rat1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane multiple interactionsEXP 64804642 more ...CTDPMID:19414516
Hivep2Rat17alpha-ethynylestradiol decreases expressionISOHIVEP2 (Homo sapiens)6480464Ethinyl Estradiol results in decreased expression of HIVEP2 mRNACTDPMID:18936297
Hivep2Rat17alpha-ethynylestradiol affects expressionEXP 6480464Ethinyl Estradiol affects the expression of HIVEP2 mRNACTDPMID:26865667
Hivep2Rat17alpha-ethynylestradiol affects expressionISOHIVEP2 (Homo sapiens)6480464Ethinyl Estradiol affects the expression of HIVEP2 mRNACTDPMID:26865667
Hivep2Rat17beta-estradiol decreases expressionISOHivep2 (Mus musculus)6480464Estradiol results in decreased expression of HIVEP2 mRNACTDPMID:39298647
Hivep2Rat17beta-estradiol increases expressionISOHIVEP2 (Homo sapiens)6480464Estradiol results in increased expression of HIVEP2 mRNACTDPMID:31614463
Hivep2Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOHivep2 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of HIVEP2 mRNACTDPMID:24058054 and PMID:26377647
Hivep2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of HIVEP2 mRNACTDPMID:33387578
Hivep2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOHivep2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of HIVEP2 mRNACTDPMID:37172768
Hivep2Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOHivep2 (Mus musculus)6480464[Tetrachlorodibenzodioxin affects the methylation of HIVEP2 intron] which results in increased expression of HIVEP2 mRNACTDPMID:33017471
Hivep2Rat2-butoxyethanol decreases expressionISOHivep2 (Mus musculus)6480464n-butoxyethanol results in decreased expression of HIVEP2 mRNACTDPMID:19812364
Hivep2Rat3',5'-cyclic AMP multiple interactionsEXP 64804642 more ...CTDPMID:19414516
Hivep2Rat3,3',4,4',5-pentachlorobiphenyl increases expressionEXP 64804643 more ...CTDPMID:23196670
Hivep2Rat4,4'-diaminodiphenylmethane decreases expressionISOHivep2 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of HIVEP2 mRNACTDPMID:18648102
Hivep2Rat4,4'-sulfonyldiphenol decreases expressionISOHivep2 (Mus musculus)6480464bisphenol S results in decreased expression of HIVEP2 mRNACTDPMID:39298647
Hivep2Rat4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of HIVEP2 mRNACTDPMID:36041667

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Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hivep2Ratpositive regulation of transcription by RNA polymerase II involved_inIDA 12790649PMID:10207097NTNU_SB 
Hivep2Ratregulation of transcription by RNA polymerase II involved_inIBAFB:FBgn0003396 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hivep2Ratnucleoplasm located_inISOHIVEP2 (Homo sapiens)1624291 RGDGO_REF:0000052
Hivep2Ratnucleoplasm located_inIEAUniProtKB:P31629 and ensembl:ENSP000003565751600115GO_REF:0000107EnsemblGO_REF:0000107
Hivep2Ratnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
Hivep2Ratnucleus is_active_inIBAFB:FBgn0003396 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Hivep2Ratnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043

Molecular Function

  


1 to 11 of 11 rows
#
Reference Title
Reference Citation
1. Activation of somatostatin receptor II expression by transcription factors MIBP1 and SEF-2 in the murine brain. Dörflinger U, etal., Mol Cell Biol. 1999 May;19(5):3736-47.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. Cloning and characterization of a c-myc intron binding protein (MIBP1). Makino R, etal., Nucleic Acids Res 1994 Dec 25;22(25):5679-85.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. GOA pipeline RGD automated data pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Angiotensinogen gene-inducible enhancer-binding protein 1, a member of a new family of large nuclear proteins that recognize nuclear factor kappa B-binding sites through a zinc finger motif. Ron D, etal., Mol Cell Biol 1991 May;11(5):2887-95.
11. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
1 to 11 of 11 rows


Hivep2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8110,176,880 - 10,376,089 (+)NCBIGRCr8
mRatBN7.218,358,205 - 8,555,993 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl18,359,289 - 8,555,993 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx18,074,215 - 8,272,890 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0114,073,360 - 14,272,030 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.018,341,455 - 8,537,959 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.018,129,354 - 8,333,890 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl18,310,577 - 8,333,885 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.019,755,847 - 9,953,696 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.418,783,016 - 9,032,351 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.118,783,015 - 9,032,351 (+)NCBI
Celera16,844,547 - 7,040,486 (+)NCBICelera
Cytogenetic Map1p13NCBI
HIVEP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386142,751,469 - 142,946,365 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6142,751,469 - 142,956,698 (-)EnsemblGRCh38hg38GRCh38
GRCh376143,072,606 - 143,266,313 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366143,114,297 - 143,308,031 (-)NCBINCBI36Build 36hg18NCBI36
Build 346143,114,298 - 143,137,675NCBI
Celera6143,813,124 - 144,006,743 (-)NCBICelera
Cytogenetic Map6q24.2NCBI
HuRef6140,638,941 - 140,724,428 (-)NCBIHuRef
CHM1_16143,335,288 - 143,528,914 (-)NCBICHM1_1
T2T-CHM13v2.06143,943,829 - 144,138,712 (-)NCBIT2T-CHM13v2.0
Hivep2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391013,841,819 - 14,027,122 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1013,841,819 - 14,027,118 (+)EnsemblGRCm39 Ensembl
GRCm381013,961,609 - 14,151,378 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1013,966,075 - 14,151,374 (+)EnsemblGRCm38mm10GRCm38
MGSCv371013,686,185 - 13,871,184 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361013,656,577 - 13,841,576 (+)NCBIMGSCv36mm8
Celera1013,865,115 - 14,051,975 (+)NCBICelera
Cytogenetic Map10A2NCBI
cM Map105.14NCBI
Hivep2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543617,518,603 - 17,550,790 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543617,368,948 - 17,549,957 (+)NCBIChiLan1.0ChiLan1.0
HIVEP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25162,725,432 - 162,920,256 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16160,620,200 - 160,705,780 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06140,518,954 - 140,712,849 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16145,243,271 - 145,328,852 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6145,240,914 - 145,328,850 (-)Ensemblpanpan1.1panPan2
HIVEP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1134,367,455 - 34,560,277 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl134,369,106 - 34,398,234 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha135,265,065 - 35,457,737 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0134,542,249 - 34,735,165 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl134,542,250 - 34,735,498 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1134,411,412 - 34,603,972 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0134,294,004 - 34,486,563 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0134,605,272 - 34,798,204 (-)NCBIUU_Cfam_GSD_1.0
Hivep2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946129,334,195 - 129,515,890 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366253,267,947 - 3,301,369 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366253,219,260 - 3,301,361 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HIVEP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl122,412,984 - 22,436,130 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1122,240,681 - 22,436,945 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2124,926,118 - 24,957,537 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HIVEP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11330,476,938 - 30,501,708 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1330,477,205 - 30,500,066 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660402,437,283 - 2,632,922 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hivep2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475311,383,280 - 11,447,934 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475311,263,701 - 11,446,887 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Hivep2
1221 total Variants

Predicted Target Of
Summary Value
Count of predictions:364
Count of miRNA genes:198
Interacting mature miRNAs:261
Transcripts:ENSRNOT00000015131
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 15 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2313090Bmd69Bone mineral density QTL 694.40.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)1132356093Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
4889451Eae29Experimental allergic encephalomyelitis QTL 295.51nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1592587724697545Rat
1578650Bmd6Bone mineral density QTL 612.2femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)150910843284926Rat
1354647Despr8Despair related QTL 80.0000341locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1124744506Rat
1578651Bmd7Bone mineral density QTL 714.2femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)150910843284926Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
7421626Bp360Blood pressure QTL 3600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1439328949393289Rat
2313070Bss52Bone structure and strength QTL 524.40.0001body length (VT:0001256)body length (CMO:0000013)1132356093Rat
738020Pia8Pristane induced arthritis QTL 84.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1165833076Rat

1 to 10 of 15 rows
D1Got8  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,528,113 - 8,528,343 (+)MAPPERmRatBN7.2
Rnor_6.018,306,014 - 8,306,243NCBIRnor6.0
Rnor_5.019,925,820 - 9,926,049UniSTSRnor5.0
RGSC_v3.419,004,474 - 9,004,704RGDRGSC3.4
RGSC_v3.419,004,475 - 9,004,704UniSTSRGSC3.4
RGSC_v3.119,004,475 - 9,004,704RGD
Celera17,012,598 - 7,012,840UniSTS
RH 3.4 Map1102.72UniSTS
RH 3.4 Map1102.72RGD
RH 2.0 Map10.0RGD
Cytogenetic Map1p13UniSTS
D1Got366  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,403,128 - 8,403,253 (+)MAPPERmRatBN7.2
Rnor_6.018,160,094 - 8,160,218NCBIRnor6.0
Rnor_5.019,786,587 - 9,786,711UniSTSRnor5.0
RGSC_v3.418,827,582 - 8,827,706UniSTSRGSC3.4
Celera16,887,822 - 6,887,946UniSTS
Cytogenetic Map1p13UniSTS
RH78408  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,554,880 - 8,555,064 (+)MAPPERmRatBN7.2
Rnor_6.018,332,778 - 8,332,961NCBIRnor6.0
Rnor_5.019,952,584 - 9,952,767UniSTSRnor5.0
RGSC_v3.419,031,239 - 9,031,422UniSTSRGSC3.4
Celera17,039,374 - 7,039,557UniSTS
Cytogenetic Map1p13UniSTS
RH142838  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,369,179 - 8,369,305 (+)MAPPERmRatBN7.2
Rnor_6.018,139,245 - 8,139,370NCBIRnor6.0
Rnor_5.019,765,738 - 9,765,863UniSTSRnor5.0
RGSC_v3.418,792,909 - 8,793,034UniSTSRGSC3.4
Celera16,854,446 - 6,854,571UniSTS
RH 3.4 Map1106.1UniSTS
Cytogenetic Map1p13UniSTS
PMC126259P6  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,554,087 - 8,554,185 (+)MAPPERmRatBN7.2
Rnor_6.018,331,985 - 8,332,082NCBIRnor6.0
Rnor_5.019,951,791 - 9,951,888UniSTSRnor5.0
RGSC_v3.419,030,446 - 9,030,543UniSTSRGSC3.4
Celera17,038,581 - 7,038,678UniSTS
Cytogenetic Map1p13UniSTS
RH138492  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218,522,314 - 8,522,514 (+)MAPPERmRatBN7.2
Rnor_6.018,300,215 - 8,300,414NCBIRnor6.0
Rnor_5.019,920,021 - 9,920,220UniSTSRnor5.0
RGSC_v3.418,998,676 - 8,998,875UniSTSRGSC3.4
Celera17,006,847 - 7,007,046UniSTS
RH 3.4 Map1100.31UniSTS
Cytogenetic Map1p13UniSTS
BF409594  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8110,281,606 - 10,281,727 (+)Marker Load Pipeline
mRatBN7.218,461,503 - 8,461,624 (+)MAPPERmRatBN7.2
Rnor_6.018,239,758 - 8,239,878NCBIRnor6.0
Rnor_5.019,859,857 - 9,859,977UniSTSRnor5.0
Celera16,946,273 - 6,946,393UniSTS
RH 3.4 Map1106.1UniSTS
Cytogenetic Map1p13UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000015131   ⟹   ENSRNOP00000015131
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl18,359,289 - 8,555,993 (+)Ensembl
Rnor_6.0 Ensembl18,310,577 - 8,333,885 (+)Ensembl
RefSeq Acc Id: NM_024137   ⟹   NP_077051
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,179,402 - 10,376,089 (+)NCBI
mRatBN7.218,359,289 - 8,555,993 (+)NCBI
Rnor_6.018,129,354 - 8,333,890 (+)NCBI
Rnor_5.019,755,847 - 9,953,696 (+)NCBI
RGSC_v3.418,783,016 - 9,032,351 (+)RGD
Celera16,844,547 - 7,040,486 (+)RGD
Sequence:
RefSeq Acc Id: XM_039109863   ⟹   XP_038965791
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,176,880 - 10,376,084 (+)NCBI
mRatBN7.218,358,679 - 8,555,189 (+)NCBI
RefSeq Acc Id: XM_039109867   ⟹   XP_038965795
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,176,880 - 10,376,084 (+)NCBI
mRatBN7.218,358,678 - 8,555,189 (+)NCBI
RefSeq Acc Id: XM_039109870   ⟹   XP_038965798
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,176,880 - 10,376,084 (+)NCBI
mRatBN7.218,358,693 - 8,555,189 (+)NCBI
RefSeq Acc Id: XM_039109872   ⟹   XP_038965800
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,179,008 - 10,376,084 (+)NCBI
mRatBN7.218,359,083 - 8,555,189 (+)NCBI
RefSeq Acc Id: XM_039109882   ⟹   XP_038965810
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,176,880 - 10,376,084 (+)NCBI
mRatBN7.218,358,205 - 8,555,189 (+)NCBI
RefSeq Acc Id: XM_039109885   ⟹   XP_038965813
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,179,008 - 10,376,084 (+)NCBI
mRatBN7.218,359,084 - 8,555,189 (+)NCBI
RefSeq Acc Id: XM_039109890   ⟹   XP_038965818
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,176,880 - 10,376,084 (+)NCBI
mRatBN7.218,358,219 - 8,555,189 (+)NCBI
RefSeq Acc Id: XM_063287884   ⟹   XP_063143954
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,231,095 - 10,376,084 (+)NCBI
RefSeq Acc Id: XM_063287903   ⟹   XP_063143973
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,176,880 - 10,376,084 (+)NCBI
RefSeq Acc Id: XM_063287906   ⟹   XP_063143976
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8110,179,008 - 10,376,084 (+)NCBI
1 to 5 of 12 rows
1 to 5 of 12 rows
RefSeq Acc Id: NP_077051   ⟸   NM_024137
- UniProtKB: Q63725 (UniProtKB/Swiss-Prot),   Q00900 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000015131   ⟸   ENSRNOT00000015131
RefSeq Acc Id: XP_038965810   ⟸   XM_039109882
- Peptide Label: isoform X1
- UniProtKB: G3V7H8 (UniProtKB/TrEMBL),   A6JP69 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038965818   ⟸   XM_039109890
- Peptide Label: isoform X1
- UniProtKB: G3V7H8 (UniProtKB/TrEMBL),   A6JP69 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038965795   ⟸   XM_039109867
- Peptide Label: isoform X1
- UniProtKB: G3V7H8 (UniProtKB/TrEMBL),   A6JP69 (UniProtKB/TrEMBL)
C2H2-type


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-62354 BioCyc
Ensembl Genes ENSRNOG00000011015 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000015131 ENTREZGENE
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot
InterPro Zinc-finger_DNA-bd_regulators UniProtKB/Swiss-Prot
  Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report rno:29721 UniProtKB/Swiss-Prot
NCBI Gene 29721 ENTREZGENE
PANTHER SCHNURRI, ISOFORM F UniProtKB/Swiss-Prot
  TRANSCRIPTION FACTOR HIVEP2 UniProtKB/Swiss-Prot
Pfam zf-C2H2 UniProtKB/Swiss-Prot
PhenoGen Hivep2 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000011015 RatGTEx
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
TIGR TC230705
UniProt A6JP69 ENTREZGENE, UniProtKB/TrEMBL
  G3V7H8 ENTREZGENE, UniProtKB/TrEMBL
  Q00900 ENTREZGENE
  Q63725 ENTREZGENE
  ZEP2_RAT UniProtKB/Swiss-Prot
UniProt Secondary Q63725 UniProtKB/Swiss-Prot
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-08-13 Hivep2  HIVEP zinc finger 2  Hivep2  human immunodeficiency virus type I enhancer binding protein 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Hivep2  human immunodeficiency virus type I enhancer binding protein 2    human immunodeficiency virus type 1 enhancer-binding protein 2   Name updated 1299863 APPROVED
2002-06-10 Hivep2  human immunodeficiency virus type 1 enhancer-binding protein 2       Name updated 70584 APPROVED

Note Type Note Reference
gene_domains contains two zinc finger domains 61627