Dbr1 (debranching RNA lariats 1) - Rat Genome Database

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Gene: Dbr1 (debranching RNA lariats 1) Rattus norvegicus
Analyze
Symbol: Dbr1
Name: debranching RNA lariats 1
RGD ID: 1598038
Description: Predicted to enable RNA lariat debranching enzyme activity. Predicted to be involved in RNA fragment catabolic process and RNA splicing, via transesterification reactions. Predicted to act upstream of or within mRNA splicing, via spliceosome. Predicted to be located in nucleoplasm. Human ortholog(s) of this gene implicated in brain disease. Orthologous to human DBR1 (debranching RNA lariats 1); INTERACTS WITH bisphenol A; cadmium dichloride; Cuprizon.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: debranching enzyme homolog 1; debranching enzyme homolog 1 (S. cerevisiae); lariat debranching enzyme; LOC315950; LOC681234; similar to debranching enzyme homolog 1
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88109,018,364 - 109,030,092 (+)NCBIGRCr8
mRatBN7.28100,139,039 - 100,150,768 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8100,139,034 - 100,151,030 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8105,805,842 - 105,817,525 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08104,005,138 - 104,016,821 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08101,847,672 - 101,859,355 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08107,826,690 - 107,838,186 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8107,826,424 - 107,838,339 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08107,251,356 - 107,262,732 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48104,443,418 - 104,455,249 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera899,539,355 - 99,551,081 (+)NCBICelera
Cytogenetic Map8q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dbr1RatENCEPHALITIS, ACUTE, INFECTION (VIRAL)-INDUCED, SUSCEPTIBILITY TO, 11  ISORGD:13236258554872ClinVar Annotator: match by term: DBR1-related condition | ClinVar Annotator: match by term: Encephalitis, acute, more ...ClinVarPMID:25741868|PMID:28492532|PMID:29474921|PMID:37656279
Dbr1Ratgenetic disease  ISORGD:13236258554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532
Dbr1RatXEROSIS AND GROWTH FAILURE WITH IMMUNE AND PULMONARY DYSFUNCTION SYNDROME  ISORGD:13236258554872ClinVar Annotator: match by term: Xerosis and growth failure with immune and pulmonary dysfunction syndromeClinVarPMID:25741868|PMID:37656279
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dbr1Ratamyotrophic lateral sclerosis  ISORGD:132362511554173CTD Direct Evidence: therapeuticCTDPMID:23104007
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dbr1RatENCEPHALITIS, ACUTE, INFECTION (VIRAL)-INDUCED, SUSCEPTIBILITY TO, 11 susceptibilityISORGD:13236257240710 OMIM 
Dbr1RatXEROSIS AND GROWTH FAILURE WITH IMMUNE AND PULMONARY DYSFUNCTION SYNDROME susceptibilityISORGD:13236257240710 OMIM 

1 to 20 of 46 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dbr1Rat1,2-dimethylhydrazine increases expressionISORGD:161992264804641,2-Dimethylhydrazine results in increased expression of DBR1 mRNACTDPMID:22206623
Dbr1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:16199226480464Tetrachlorodibenzodioxin affects the expression of DBR1 mRNACTDPMID:21570461
Dbr1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:13236256480464Tetrachlorodibenzodioxin results in decreased expression of DBR1 mRNACTDPMID:29704546
Dbr1Ratacrylamide decreases expressionISORGD:13236256480464Acrylamide results in decreased expression of DBR1 mRNACTDPMID:32763439
Dbr1Rataflatoxin B1 increases expressionISORGD:16199226480464Aflatoxin B1 results in increased expression of DBR1 mRNACTDPMID:19770486
Dbr1Ratarsane multiple interactionsISORGD:13236256480464[sodium arsenite results in increased abundance of Arsenic] which results in increased expression of DBR1 more ...CTDPMID:39836092
Dbr1Ratarsenic atom multiple interactionsISORGD:13236256480464[sodium arsenite results in increased abundance of Arsenic] which results in increased expression of DBR1 more ...CTDPMID:39836092
Dbr1Ratbenzo[a]pyrene multiple interactionsISORGD:16199226480464Benzo(a)pyrene promotes the reaction [AHR protein binds to DBR1 promoter]CTDPMID:19654925
Dbr1Ratbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of DBR1 mRNACTDPMID:25181051|PMID:34947998
Dbr1Ratbisphenol A decreases expressionISORGD:16199226480464bisphenol A results in decreased expression of DBR1 mRNACTDPMID:33221593
Dbr1Ratcadmium dichloride increases expressionEXP 6480464Cadmium Chloride results in increased expression of DBR1 mRNACTDPMID:31077537
Dbr1Ratcadmium dichloride decreases expressionISORGD:13236256480464Cadmium Chloride results in decreased expression of DBR1 mRNACTDPMID:38568856
Dbr1Ratcadmium dichloride multiple interactionsEXP 6480464[Cadmium Chloride co-treated with diallyl disulfide] results in increased expression of DBR1 mRNACTDPMID:31077537
Dbr1Ratchlorpyrifos decreases expressionISORGD:16199226480464Chlorpyrifos results in decreased expression of DBR1 mRNACTDPMID:37019170
Dbr1Ratcopper(II) sulfate decreases expressionISORGD:13236256480464Copper Sulfate results in decreased expression of DBR1 mRNACTDPMID:19549813
Dbr1RatCuprizon decreases expressionEXP 6480464Cuprizone results in decreased expression of DBR1 mRNACTDPMID:26577399
Dbr1RatCuprizon increases expressionEXP 6480464Cuprizone results in increased expression of DBR1 mRNACTDPMID:27523638
Dbr1Ratcyclosporin A decreases expressionISORGD:13236256480464Cyclosporine results in decreased expression of DBR1 mRNACTDPMID:25562108
Dbr1Ratdiallyl disulfide multiple interactionsEXP 6480464[Cadmium Chloride co-treated with diallyl disulfide] results in increased expression of DBR1 mRNACTDPMID:31077537
Dbr1RatDibutyl phosphate affects expressionISORGD:13236256480464di-n-butylphosphoric acid affects the expression of DBR1 mRNACTDPMID:37042841

1 to 20 of 46 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dbr1RatmRNA processing involved_inIEAUniProtKB-KW:KW-05071600115GO_REF:0000043UniProtGO_REF:0000043
Dbr1RatmRNA processing involved_inIEAInterPro:IPR0077081600115GO_REF:0000002InterProGO_REF:0000002
Dbr1RatmRNA splicing, via spliceosome acts_upstream_of_or_withinISORGD:16199221624291 PMID:10982890RGDPMID:10982890
Dbr1RatRNA fragment catabolic process involved_inISORGD:13236251624291 PMID:37656279RGDPMID:37656279
Dbr1RatRNA splicing, via transesterification reactions involved_inISORGD:13236251624291 PMID:10982890RGDPMID:10982890

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dbr1Ratnucleoplasm located_inISORGD:1323625|UniProtKB:Q9UK59-11624291 RGDGO_REF:0000052
Dbr1Ratnucleus located_inISORGD:13236251624291 PMID:10982890RGDPMID:10982890
Dbr1Ratnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dbr1Rathydrolase activity enablesIEAUniProtKB-KW:KW-03781600115GO_REF:0000043UniProtGO_REF:0000043
Dbr1Rathydrolase activity enablesIEAInterPro:IPR0048431600115GO_REF:0000002InterProGO_REF:0000002
Dbr1Rathydrolase activity, acting on ester bonds enablesIEAInterPro:IPR0077081600115GO_REF:0000002InterProGO_REF:0000002
Dbr1Ratmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
Dbr1RatRNA lariat debranching enzyme activity enablesISORGD:13236251624291 PMID:10982890, PMID:29474921RGDPMID:10982890|PMID:29474921
Dbr1RatRNA lariat debranching enzyme activity enablesISORGD:16199221624291 PMID:10982890RGDPMID:10982890
Dbr1RatRNA lariat debranching enzyme activity enablesIEAARBA:ARBA000288861600115GO_REF:0000117UniProtGO_REF:0000117


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10982890   PMID:12477932   PMID:22658674   PMID:30361391  



Dbr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88109,018,364 - 109,030,092 (+)NCBIGRCr8
mRatBN7.28100,139,039 - 100,150,768 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8100,139,034 - 100,151,030 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8105,805,842 - 105,817,525 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08104,005,138 - 104,016,821 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08101,847,672 - 101,859,355 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08107,826,690 - 107,838,186 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8107,826,424 - 107,838,339 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08107,251,356 - 107,262,732 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48104,443,418 - 104,455,249 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera899,539,355 - 99,551,081 (+)NCBICelera
Cytogenetic Map8q31NCBI
DBR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383138,160,988 - 138,174,921 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3138,160,988 - 138,174,949 (-)EnsemblGRCh38hg38GRCh38
GRCh373137,879,830 - 137,893,763 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363139,362,542 - 139,376,463 (-)NCBINCBI36Build 36hg18NCBI36
Build 343139,362,550 - 139,376,471NCBI
Celera3136,304,598 - 136,318,559 (-)NCBICelera
Cytogenetic Map3q22.3NCBI
HuRef3135,254,888 - 135,268,849 (-)NCBIHuRef
CHM1_13137,843,634 - 137,857,589 (-)NCBICHM1_1
T2T-CHM13v2.03140,901,580 - 140,915,511 (-)NCBIT2T-CHM13v2.0
Dbr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39999,457,839 - 99,467,060 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl999,457,852 - 99,466,554 (+)EnsemblGRCm39 Ensembl
GRCm38999,575,786 - 99,585,007 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl999,575,799 - 99,584,501 (+)EnsemblGRCm38mm10GRCm38
MGSCv37999,476,218 - 99,484,762 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36999,385,151 - 99,393,695 (+)NCBIMGSCv36mm8
Celera999,110,559 - 99,119,100 (+)NCBICelera
Cytogenetic Map9E3.3NCBI
cM Map951.86NCBI
DBR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22136,065,814 - 136,082,053 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13136,068,127 - 136,086,788 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03135,188,636 - 135,202,934 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13142,639,712 - 142,653,016 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3142,639,712 - 142,653,016 (-)Ensemblpanpan1.1panPan2
DBR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12334,375,691 - 34,388,317 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2334,376,228 - 34,388,263 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2334,368,284 - 34,380,893 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02334,915,650 - 34,928,302 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2334,915,650 - 34,928,278 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12334,597,534 - 34,610,147 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02334,662,956 - 34,675,492 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02334,913,997 - 34,926,603 (-)NCBIUU_Cfam_GSD_1.0
Dbr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560273,766,245 - 73,776,137 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936540505,619 - 515,964 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936540504,638 - 515,913 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DBR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1378,958,218 - 78,970,137 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11378,958,301 - 78,970,250 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21386,477,860 - 86,480,220 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DBR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11552,367,197 - 52,381,076 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1552,367,357 - 52,380,227 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604125,381,120 - 25,394,996 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dbr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473014,681,730 - 14,711,368 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473014,682,951 - 14,693,450 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Dbr1
52 total Variants

Predicted Target Of
Summary Value
Count of predictions:127
Count of miRNA genes:100
Interacting mature miRNAs:106
Transcripts:ENSRNOT00000019769
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 29 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300177Cm2Cardiac mass QTL 23.65heart mass (VT:0007028)heart weight (CMO:0000017)854259986100382532Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)893535351123900184Rat
8693654Alc32Alcohol consumption QTL 3220.755drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)888612425107550209Rat
1358912Bw51Body weight QTL 512.95body mass (VT:0001259)body weight (CMO:0000012)851351728107062046Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
738014Anxrr15Anxiety related response QTL 153.60.005locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)895718998123900184Rat

1 to 10 of 29 rows
BF397095  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28100,150,660 - 100,150,856 (+)MAPPERmRatBN7.2
Rnor_6.08107,838,079 - 107,838,274NCBIRnor6.0
Rnor_5.08107,262,625 - 107,262,820UniSTSRnor5.0
RGSC_v3.48104,455,142 - 104,455,337UniSTSRGSC3.4
Celera899,550,974 - 99,551,169UniSTS
RH 3.4 Map81040.59UniSTS
Cytogenetic Map8q31UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000019769   ⟹   ENSRNOP00000019769
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8100,139,034 - 100,151,030 (+)Ensembl
Rnor_6.0 Ensembl8107,826,424 - 107,838,339 (+)Ensembl
RefSeq Acc Id: NM_001109437   ⟹   NP_001102907
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88109,018,364 - 109,030,092 (+)NCBI
mRatBN7.28100,139,039 - 100,150,768 (+)NCBI
Rnor_6.08107,826,690 - 107,838,186 (+)NCBI
Rnor_5.08107,251,356 - 107,262,732 (+)NCBI
RGSC_v3.48104,443,418 - 104,455,249 (+)RGD
Celera899,539,355 - 99,551,081 (+)RGD
Sequence:
Protein RefSeqs NP_001102907 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI66797 (Get FASTA)   NCBI Sequence Viewer  
  EDL77437 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000019769.2
  ENSRNOP00000109481
RefSeq Acc Id: NP_001102907   ⟸   NM_001109437
- UniProtKB: B2RYJ2 (UniProtKB/TrEMBL),   A6I2E0 (UniProtKB/TrEMBL),   F7FLJ5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000019769   ⟸   ENSRNOT00000019769
Name Modeler Protein Id AA Range Protein Structure
AF-B2RYJ2-F1-model_v2 AlphaFold B2RYJ2 1-545 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13696212
Promoter ID:EPDNEW_R6737
Type:multiple initiation site
Name:Dbr1_1
Description:debranching RNA lariats 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.08107,826,682 - 107,826,742EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-29391 BioCyc
Ensembl Genes ENSRNOG00000014588 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000019769.5 UniProtKB/TrEMBL
  ENSRNOT00000127819 ENTREZGENE
Gene3D-CATH 3.60.21.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7938214 IMAGE-MGC_LOAD
InterPro DBR1_C UniProtKB/TrEMBL
  Dbr1_N UniProtKB/TrEMBL
  M-pesterase UniProtKB/TrEMBL
  Metallo-depent_PP-like UniProtKB/TrEMBL
KEGG Report rno:681234 UniProtKB/TrEMBL
MGC_CLONE MGC:188596 IMAGE-MGC_LOAD
NCBI Gene 681234 ENTREZGENE
PANTHER LARIAT DEBRANCHING ENZYME UniProtKB/TrEMBL
  RNA LARIAT DEBRANCHING ENZYME UniProtKB/TrEMBL
Pfam DBR1 UniProtKB/TrEMBL
  Metallophos UniProtKB/TrEMBL
PhenoGen Dbr1 PhenoGen
RatGTEx ENSRNOG00000014588 RatGTEx
SMART DBR1 UniProtKB/TrEMBL
Superfamily-SCOP SSF56300 UniProtKB/TrEMBL
UniProt A6I2E0 ENTREZGENE, UniProtKB/TrEMBL
  B2RYJ2 ENTREZGENE
  F7FLJ5 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary B2RYJ2 UniProtKB/TrEMBL
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-09-16 Dbr1  debranching RNA lariats 1  Dbr1  debranching enzyme homolog 1 (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2009-06-15 Dbr1  debranching enzyme homolog 1 (S. cerevisiae)  Dbr1_predicted  debranching enzyme homolog 1 (S. cerevisiae) (predicted)  Data merged from RGD:1311917 1643240 APPROVED
2008-03-05 Dbr1  debranching enzyme homolog 1 (S. cerevisiae)  LOC681234  similar to debranching enzyme homolog 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-01-09 LOC681234  similar to debranching enzyme homolog 1  LOC683696  similar to debranching enzyme homolog 1  Data merged from RGD:1584458 1643240 APPROVED
2006-11-20 LOC681234  similar to debranching enzyme homolog 1      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC683696  similar to debranching enzyme homolog 1      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-01-12 Dbr1_predicted  debranching enzyme homolog 1 (S. cerevisiae) (predicted)      Symbol and Name status set to approved 70820 APPROVED