Ppm1j (protein phosphatase, Mg2+/Mn2+ dependent, 1J) - Rat Genome Database

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Gene: Ppm1j (protein phosphatase, Mg2+/Mn2+ dependent, 1J) Rattus norvegicus
Analyze
Symbol: Ppm1j
Name: protein phosphatase, Mg2+/Mn2+ dependent, 1J
RGD ID: 1359104
Description: Predicted to enable [pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within protein dephosphorylation. Predicted to be active in mitochondrion. Orthologous to human PPM1J (protein phosphatase, Mg2+/Mn2+ dependent 1J); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; aflatoxin B1.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: MGC95205; PP2C-zeta; protein phosphatase 1J; protein phosphatase 2a, catalytic subunit, zeta isoform; protein phosphatase 2C isoform zeta; protein phosphatase 2C zeta
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82194,966,854 - 194,972,228 (+)NCBIGRCr8
mRatBN7.22192,278,597 - 192,283,883 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2192,278,517 - 192,283,882 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2199,873,234 - 199,878,245 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02197,745,513 - 197,750,529 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02192,562,458 - 192,567,473 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02207,263,307 - 207,268,601 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2207,262,934 - 207,268,609 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02226,682,751 - 226,687,765 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42200,039,684 - 200,044,698 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12200,002,437 - 200,007,451 (+)NCBI
Celera2184,745,409 - 184,750,423 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ppm1jRatamenorrhea  ISOPPM1J (Homo sapiens)8554872ClinVar Annotator: match by term: Primary amenorrheaClinVarPMID:21681106
Ppm1jRathereditary spastic paraplegia 47  ISOPPM1J (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary spastic paraplegia 47ClinVarPMID:22290197 more ...

1 to 20 of 74 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ppm1jRat1,2-dimethylhydrazine increases expressionISOPpm1j (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of PPM1J mRNACTDPMID:22206623
Ppm1jRat17alpha-ethynylestradiol increases expressionISOPPM1J (Homo sapiens)6480464Ethinyl Estradiol results in increased expression of PPM1J mRNACTDPMID:18936297
Ppm1jRat17beta-estradiol increases expressionISOPPM1J (Homo sapiens)6480464Estradiol results in increased expression of PPM1J mRNACTDPMID:23019147
Ppm1jRat2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOPpm1j (Mus musculus)6480464[2 more ...CTDPMID:25510870
Ppm1jRat2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOPpm1j (Mus musculus)6480464[2 more ...CTDPMID:25510870
Ppm1jRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOPpm1j (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of PPM1J mRNACTDPMID:21570461
Ppm1jRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of PPM1J mRNACTDPMID:34747641
Ppm1jRat4,4'-sulfonyldiphenol increases expressionISOPpm1j (Mus musculus)6480464bisphenol S results in increased expression of PPM1J mRNACTDPMID:30951980
Ppm1jRat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of PPM1J mRNACTDPMID:30047161
Ppm1jRataflatoxin B1 increases expressionISOPPM1J (Homo sapiens)6480464Aflatoxin B1 results in increased expression of PPM1J mRNACTDPMID:22100608
Ppm1jRataflatoxin B1 decreases methylationISOPPM1J (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of PPM1J geneCTDPMID:27153756
Ppm1jRataflatoxin B1 increases expressionEXP 6480464Aflatoxin B1 results in increased expression of PPM1J mRNACTDPMID:23630614 and PMID:25378103
Ppm1jRatalpha-Zearalanol multiple interactionsEXP 6480464[Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of PPM1J mRNACTDPMID:35163327
Ppm1jRatalpha-Zearalanol decreases expressionEXP 6480464Zeranol results in decreased expression of PPM1J mRNACTDPMID:35163327
Ppm1jRatamitrole decreases expressionEXP 6480464Amitrole results in decreased expression of PPM1J mRNACTDPMID:30047161
Ppm1jRatamphetamine increases expressionEXP 6480464Amphetamine results in increased expression of PPM1J mRNACTDPMID:30779732
Ppm1jRatbenzo[a]pyrene decreases expressionEXP 6480464Benzo(a)pyrene results in decreased expression of PPM1J mRNACTDPMID:21839799
Ppm1jRatbenzo[a]pyrene increases expressionISOPPM1J (Homo sapiens)6480464Benzo(a)pyrene results in increased expression of PPM1J mRNACTDPMID:32234424
Ppm1jRatbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of PPM1J mRNACTDPMID:25181051
Ppm1jRatbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of PPM1J mRNACTDPMID:34947998

1 to 20 of 74 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ppm1jRatprotein dephosphorylation acts_upstream_of_or_withinISOPpm1j (Mus musculus)1624291 PMID:12633878RGDPMID:12633878
Ppm1jRatsignal transduction involved_inIBAMGI:1913763 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ppm1jRatmitochondrion is_active_inIBACGD:CAL0000200868 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ppm1jRat[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity enablesIBAPANTHER:PTN000353228 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ppm1jRathydrolase activity enablesIEAUniProtKB-KW:KW-03781600115GO_REF:0000043UniProtGO_REF:0000043
Ppm1jRatphosphoprotein phosphatase activity enablesIEAARBA:ARBA000276511600115GO_REF:0000117UniProtGO_REF:0000117
Ppm1jRatphosphoprotein phosphatase activity enablesIEAUniProtKB-KW:KW-09041600115GO_REF:0000043UniProtGO_REF:0000043
Ppm1jRatprotein binding enablesISOPPM1J (Homo sapiens)1624291UniProtKB:Q494U1-3 more ...RGDPMID:32296183
Ppm1jRatprotein binding enablesISOPpm1j (Mus musculus)1624291PR:P63280 PMID:12633878RGDPMID:12633878
Ppm1jRatprotein serine/threonine phosphatase activity enablesIEAUniProtKB:Q149T7 and ensembl:ENSMUSP000000022981600115GO_REF:0000107EnsemblGO_REF:0000107
Ppm1jRatprotein serine/threonine phosphatase activity enablesIEAEC:3.1.3.161600115GO_REF:0000003UniProtGO_REF:0000003
Ppm1jRatprotein serine/threonine phosphatase activity enablesISOPpm1j (Mus musculus)1624291 PMID:12633878RGDPMID:12633878
Ppm1jRatprotein serine/threonine phosphatase activity enablesIEAInterPro:IPR0156551600115GO_REF:0000002InterProGO_REF:0000002
Ppm1jRatprotein serine/threonine phosphatase activity enablesIEARHEA:20629 and RHEA:470041600115GO_REF:0000116RHEAGO_REF:0000116
1 to 11 of 11 rows


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. A novel protein phosphatase 2C family member (PP2Czeta) is able to associate with ubiquitin conjugating enzyme 9. Kashiwaba M, etal., FEBS Lett 2003 Mar 13;538(1-3):197-202.
3. Molecular cloning of PP2Ceta, a novel member of the protein phosphatase 2C family. Komaki K, etal., Biochim Biophys Acta 2003 Nov 30;1630(2-3):130-7.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.


Ppm1j
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82194,966,854 - 194,972,228 (+)NCBIGRCr8
mRatBN7.22192,278,597 - 192,283,883 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2192,278,517 - 192,283,882 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2199,873,234 - 199,878,245 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02197,745,513 - 197,750,529 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02192,562,458 - 192,567,473 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02207,263,307 - 207,268,601 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2207,262,934 - 207,268,609 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02226,682,751 - 226,687,765 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42200,039,684 - 200,044,698 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12200,002,437 - 200,007,451 (+)NCBI
Celera2184,745,409 - 184,750,423 (+)NCBICelera
Cytogenetic Map2q34NCBI
PPM1J
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381112,709,998 - 112,715,332 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1112,709,994 - 112,715,332 (-)EnsemblGRCh38hg38GRCh38
GRCh371113,252,620 - 113,257,954 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361113,054,139 - 113,059,473 (-)NCBINCBI36Build 36hg18NCBI36
Celera1111,483,060 - 111,488,379 (-)NCBICelera
Cytogenetic Map1p13.2NCBI
HuRef1111,111,007 - 111,116,341 (-)NCBIHuRef
CHM1_11113,367,818 - 113,373,152 (-)NCBICHM1_1
T2T-CHM13v2.01112,722,547 - 112,727,883 (-)NCBIT2T-CHM13v2.0
Ppm1j
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393104,688,322 - 104,693,334 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3104,688,372 - 104,693,334 (+)EnsemblGRCm39 Ensembl
GRCm383104,780,952 - 104,786,023 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3104,781,056 - 104,786,018 (+)EnsemblGRCm38mm10GRCm38
MGSCv373104,583,974 - 104,588,936 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363104,909,112 - 104,914,004 (+)NCBIMGSCv36mm8
Celera3106,976,413 - 106,981,377 (+)NCBICelera
Cytogenetic Map3F2.2NCBI
cM Map345.85NCBI
Ppm1j
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543516,121,206 - 16,129,296 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543516,124,087 - 16,129,296 (-)NCBIChiLan1.0ChiLan1.0
PPM1J
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21114,321,041 - 114,326,385 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11113,469,169 - 113,474,513 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01115,362,626 - 115,367,968 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11124,984,454 - 124,989,928 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1124,984,624 - 124,992,615 (+)Ensemblpanpan1.1panPan2
PPM1J
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11762,858,620 - 62,863,869 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1762,858,338 - 62,863,884 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1762,372,319 - 62,377,558 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01764,031,992 - 64,037,231 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1764,031,698 - 64,039,294 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11762,766,663 - 62,771,901 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01762,824,684 - 62,829,917 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01763,584,435 - 63,589,674 (+)NCBIUU_Cfam_GSD_1.0
Ppm1j
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505816,207,754 - 16,213,782 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366901,263,925 - 1,269,764 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366901,263,949 - 1,269,707 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPM1J
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4107,723,437 - 107,728,919 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14107,723,427 - 107,728,919 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24117,792,201 - 117,797,397 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PPM1J
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12020,924,437 - 20,929,923 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2020,924,571 - 20,929,749 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603823,741,363 - 23,746,886 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ppm1j
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247728,491,030 - 8,496,156 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247728,491,020 - 8,496,183 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Ppm1j
12 total Variants

Predicted Target Of
Summary Value
Count of predictions:80
Count of miRNA genes:70
Interacting mature miRNAs:73
Transcripts:ENSRNOT00000016833
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 68 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
1358356Srcrt1Stress Responsive Cort QTL13.66blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)2161699179222436696Rat
1331734Bp204Blood pressure QTL 2043.61192arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168358098223265385Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2136445150202447032Rat
152025245Scl81Serum cholesterol level QTL 813.49blood cholesterol amount (VT:0000180)2122609194206936711Rat
61458Bp10Blood pressure QTL 103.42arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2189020722215287351Rat

1 to 10 of 68 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 81 80 50 24 50 6 208 96 93 45 60 30



Ensembl Acc Id: ENSRNOT00000016833   ⟹   ENSRNOP00000016833
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2192,278,517 - 192,283,882 (+)Ensembl
Rnor_6.0 Ensembl2207,262,934 - 207,268,609 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110381   ⟹   ENSRNOP00000079348
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2192,278,839 - 192,283,882 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000118224   ⟹   ENSRNOP00000082364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2192,278,517 - 192,283,882 (+)Ensembl
RefSeq Acc Id: NM_001005540   ⟹   NP_001005540
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82194,967,214 - 194,972,228 (+)NCBI
mRatBN7.22192,278,869 - 192,283,883 (+)NCBI
Rnor_6.02207,263,587 - 207,268,601 (+)NCBI
Rnor_5.02226,682,751 - 226,687,765 (+)NCBI
RGSC_v3.42200,039,684 - 200,044,698 (+)RGD
Celera2184,745,409 - 184,750,423 (+)RGD
Sequence:
RefSeq Acc Id: XM_008761380   ⟹   XP_008759602
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82194,966,899 - 194,972,228 (+)NCBI
mRatBN7.22192,278,597 - 192,283,883 (+)NCBI
Rnor_6.02207,263,308 - 207,268,601 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008761381   ⟹   XP_008759603
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82194,966,871 - 194,972,228 (+)NCBI
mRatBN7.22192,278,597 - 192,283,883 (+)NCBI
Rnor_6.02207,263,307 - 207,268,601 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063281640   ⟹   XP_063137710
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82194,967,122 - 194,972,228 (+)NCBI
RefSeq Acc Id: XM_063281641   ⟹   XP_063137711
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82194,966,854 - 194,970,613 (+)NCBI
RefSeq Acc Id: XM_063281642   ⟹   XP_063137712
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82194,967,120 - 194,970,613 (+)NCBI
RefSeq Acc Id: XR_005500269
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82194,966,862 - 194,971,483 (+)NCBI
mRatBN7.22192,278,597 - 192,283,145 (+)NCBI
RefSeq Acc Id: XR_005500270
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82194,966,862 - 194,971,241 (+)NCBI
mRatBN7.22192,278,597 - 192,282,884 (+)NCBI
RefSeq Acc Id: NP_001005540   ⟸   NM_001005540
- UniProtKB: Q641Y6 (UniProtKB/Swiss-Prot),   A6K3P4 (UniProtKB/TrEMBL),   A0A8I5ZXT1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008759602   ⟸   XM_008761380
- Peptide Label: isoform X1
- UniProtKB: A0A0H2UHJ9 (UniProtKB/TrEMBL),   A0A8I5ZXT1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008759603   ⟸   XM_008761381
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZXT1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016833   ⟸   ENSRNOT00000016833
Ensembl Acc Id: ENSRNOP00000082364   ⟸   ENSRNOT00000118224
PPM-type phosphatase

Name Modeler Protein Id AA Range Protein Structure
AF-Q641Y6-F1-model_v2 AlphaFold Q641Y6 1-504 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 26 of 26 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-51763 BioCyc
Ensembl Genes ENSRNOG00000012481 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000016833 ENTREZGENE
  ENSRNOT00000110381 ENTREZGENE
  ENSRNOT00000118224 ENTREZGENE
Gene3D-CATH 3.60.40.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7132147 IMAGE-MGC_LOAD
InterPro PP2C UniProtKB/Swiss-Prot
  PPM-type_dom_sf UniProtKB/Swiss-Prot
  PPM-type_phosphatase_dom UniProtKB/Swiss-Prot
KEGG Report rno:295341 UniProtKB/Swiss-Prot
MGC_CLONE MGC:95205 IMAGE-MGC_LOAD
NCBI Gene 295341 ENTREZGENE
PANTHER PROTEIN PHOSPHATASE 1J UniProtKB/Swiss-Prot
  PTHR13832 UniProtKB/Swiss-Prot
Pfam PP2C UniProtKB/Swiss-Prot
PhenoGen Ppm1j PhenoGen
PROSITE PPM_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000012481 RatGTEx
SMART PP2Cc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF81606 UniProtKB/Swiss-Prot
UniProt A0A0H2UHJ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZMI9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZXT1 ENTREZGENE, UniProtKB/TrEMBL
  A6K3P4 ENTREZGENE, UniProtKB/TrEMBL
  PPM1J_RAT UniProtKB/Swiss-Prot, ENTREZGENE
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-03 Ppm1j  protein phosphatase, Mg2+/Mn2+ dependent, 1J  Ppm1j  protein phosphatase 1J  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-11-17 Ppm1j  protein phosphatase 1J      Symbol and Name updated 1299863 APPROVED
2005-07-29 MGC95205  protein phosphatase 2C zeta      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_expression mouse homolog is expressed in testicular germ cells in the adult mouse 1359743
gene_physical_interaction mouse homolog binds the ubiquitin-conjugating enzyme Ube2i/UBC9; association enhanced by the small ubiquitin-related modifier Sumo1 1359743