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Gene: Il17rc (interleukin 17 receptor C) Rattus norvegicus

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Symbol:

Il17rc

Name:

interleukin 17 receptor C

RGD ID:

1306392

Description:

Predicted to enable coreceptor activity; interleukin-17 receptor activity; and signaling receptor binding activity. Predicted to be involved in several processes, including granulocyte chemotaxis; interleukin-17A-mediated signaling pathway; and positive regulation of interleukin-6 production. Predicted to act upstream of or within positive regulation of cytokine production involved in inflammatory response. Predicted to be located in cell surface and plasma membrane. Human ortholog(s) of this gene implicated in chronic mucocutaneous candidiasis. Orthologous to human IL17RC (interleukin 17 receptor C); INTERACTS WITH endosulfan; gentamycin; 1,2-dimethylhydrazine (ortholog).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

interleukin-17 receptor C; LOC297520

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	IL17RC (interleukin 17 receptor C)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Il17rc (interleukin 17 receptor C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Il17rc (interleukin 17 receptor C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	IL17RC (interleukin 17 receptor C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	IL17RC (interleukin 17 receptor C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Il17rc (interleukin 17 receptor C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	IL17RC (interleukin 17 receptor C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	IL17RC (interleukin 17 receptor C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Il17rc (interleukin 17 receptor C)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	IL17RC (interleukin 17 receptor C)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Il17rc (interleukin 17 receptor C)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	il17rc (interleukin 17 receptor C)	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector)
Danio rerio (zebrafish):	wu:fl23c11	Alliance	DIOPT (Hieranoid\|OMA\|OrthoFinder\|OrthoInspector)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	148,174,573 - 148,187,071 (+)	NCBI		GRCr8
mRatBN7.2	4	146,618,321 - 146,631,444 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	146,619,004 - 146,631,442 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	152,002,952 - 152,015,394 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	147,783,795 - 147,796,235 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	146,406,105 - 146,418,521 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	145,426,647 - 145,439,845 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	145,427,367 - 145,439,843 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	208,724,714 - 208,737,144 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	149,362,504 - 149,374,934 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	149,608,503 - 149,619,775 (+)	NCBI
Celera	4	135,174,928 - 135,187,360 (+)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Il17rc	Rat	Experimental Liver Cirrhosis	treatment	IEP		151665755		RGD

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Il17rc	Rat	Atrioventricular Septal Defect 2		ISO	RGD:1314983	8554872	ClinVar Annotator: match by term: Atrioventricular septal defect, susceptibility to, 2	ClinVar	PMID:28492532
Il17rc	Rat	Candidiasis, Familial, 9		ISO	RGD:1314983	8554872	ClinVar Annotator: match by term: Candidiasis, familial, 9 \| ClinVar Annotator: match by term: IL17RC-related more ...	ClinVar	PMID:16199547\|PMID:17576681\|PMID:25741868\|PMID:25918342\|PMID:28492532\|PMID:37395078\|PMID:9536098
Il17rc	Rat	long QT syndrome		ISO	RGD:1314983	8554872	ClinVar Annotator: match by term: Long QT syndrome	ClinVar	PMID:28492532
Il17rc	Rat	myoclonic-atonic epilepsy		ISO	RGD:1314983	8554872	ClinVar Annotator: match by term: Generalized myoclonic-atonic seizure	ClinVar	PMID:25865495\|PMID:28492532\|PMID:31401500
Il17rc	Rat	Neurodevelopmental Disorders		ISO	RGD:1314983	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
Il17rc	Rat	severe congenital neutropenia 6		ISO	RGD:1314983	8554872	ClinVar Annotator: match by term: Autosomal recessive severe congenital neutropenia due to JAGN1 deficiency	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Il17rc	Rat	Prostatic Neoplasms		ISO	RGD:1314983	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:17603628

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Il17rc	Rat	Candidiasis, Familial, 9		ISO	RGD:1314983	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Il17rc	Rat	1,2-dimethylhydrazine	multiple interactions	ISO	RGD:1618205	6480464	Folic Acid inhibits the reaction [1,2-Dimethylhydrazine results in increased expression of IL17RC mRNA]	CTD	PMID:22206623
Il17rc	Rat	1,2-dimethylhydrazine	increases expression	ISO	RGD:1618205	6480464	1,2-Dimethylhydrazine results in increased expression of IL17RC mRNA	CTD	PMID:22206623
Il17rc	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	RGD:1618205	6480464	Tetrachlorodibenzodioxin affects the expression of IL17RC mRNA	CTD	PMID:21570461
Il17rc	Rat	3-isobutyl-1-methyl-7H-xanthine	multiple interactions	ISO	RGD:1314983	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] more ...	CTD	PMID:28628672
Il17rc	Rat	4,4'-sulfonyldiphenol	increases expression	ISO	RGD:1618205	6480464	bisphenol S results in increased expression of IL17RC mRNA	CTD	PMID:30951980
Il17rc	Rat	acrolein	multiple interactions	ISO	RGD:1314983	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of more ...	CTD	PMID:32699268
Il17rc	Rat	acrylamide	decreases expression	ISO	RGD:1314983	6480464	Acrylamide results in decreased expression of IL17RC mRNA	CTD	PMID:32763439
Il17rc	Rat	alpha-pinene	multiple interactions	ISO	RGD:1314983	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of more ...	CTD	PMID:32699268
Il17rc	Rat	aristolochic acid A	increases expression	ISO	RGD:1314983	6480464	aristolochic acid I results in increased expression of IL17RC mRNA	CTD	PMID:33212167
Il17rc	Rat	beta-lapachone	increases expression	ISO	RGD:1314983	6480464	beta-lapachone results in increased expression of IL17RC mRNA	CTD	PMID:38218311
Il17rc	Rat	bisphenol A	multiple interactions	ISO	RGD:1314983	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] more ...	CTD	PMID:28628672
Il17rc	Rat	bisphenol A	increases expression	ISO	RGD:1618205	6480464	bisphenol A results in increased expression of IL17RC mRNA	CTD	PMID:30951980\|PMID:33221593
Il17rc	Rat	bisphenol F	increases expression	ISO	RGD:1618205	6480464	bisphenol F results in increased expression of IL17RC mRNA	CTD	PMID:30951980
Il17rc	Rat	bisphenol F	decreases expression	ISO	RGD:1618205	6480464	bisphenol F results in decreased expression of IL17RC mRNA	CTD	PMID:38685157
Il17rc	Rat	cadmium dichloride	increases expression	ISO	RGD:1314983	6480464	Cadmium Chloride results in increased expression of IL17RC mRNA	CTD	PMID:38568856
Il17rc	Rat	cyclosporin A	decreases expression	ISO	RGD:1314983	6480464	Cyclosporine results in decreased expression of IL17RC mRNA	CTD	PMID:20106945
Il17rc	Rat	dexamethasone	increases expression	ISO	RGD:1314983	6480464	Dexamethasone results in increased expression of IL17RC mRNA	CTD	PMID:25047013
Il17rc	Rat	dexamethasone	multiple interactions	ISO	RGD:1314983	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] more ...	CTD	PMID:28628672
Il17rc	Rat	Dibutyl phosphate	affects expression	ISO	RGD:1314983	6480464	di-n-butylphosphoric acid affects the expression of IL17RC mRNA	CTD	PMID:37042841
Il17rc	Rat	dibutyl phthalate	decreases expression	ISO	RGD:1618205	6480464	Dibutyl Phthalate results in decreased expression of IL17RC mRNA	CTD	PMID:21266533
Il17rc	Rat	doxorubicin	decreases expression	ISO	RGD:1314983	6480464	Doxorubicin results in decreased expression of IL17RC mRNA	CTD	PMID:29803840
Il17rc	Rat	elemental selenium	increases expression	ISO	RGD:1314983	6480464	Selenium results in increased expression of IL17RC mRNA	CTD	PMID:19244175
Il17rc	Rat	endosulfan	decreases expression	EXP		6480464	Endosulfan results in decreased expression of IL17RC mRNA	CTD	PMID:29391264
Il17rc	Rat	epoxiconazole	decreases expression	ISO	RGD:1618205	6480464	epoxiconazole results in decreased expression of IL17RC mRNA	CTD	PMID:35436446
Il17rc	Rat	folic acid	multiple interactions	ISO	RGD:1618205	6480464	Folic Acid inhibits the reaction [1,2-Dimethylhydrazine results in increased expression of IL17RC mRNA]	CTD	PMID:22206623
Il17rc	Rat	fonofos	increases methylation	ISO	RGD:1314983	6480464	Fonofos results in increased methylation of IL17RC promoter	CTD	PMID:22847954
Il17rc	Rat	gallic acid	decreases expression	ISO	RGD:1314983	6480464	Gallic Acid results in decreased expression of IL17RC mRNA	CTD	PMID:34408198
Il17rc	Rat	genistein	decreases expression	ISO	RGD:1618205	6480464	Genistein results in decreased expression of IL17RC mRNA	CTD	PMID:32186404
Il17rc	Rat	gentamycin	increases expression	EXP		6480464	Gentamicins results in increased expression of IL17RC mRNA	CTD	PMID:33387578
Il17rc	Rat	GSK-J4	decreases expression	ISO	RGD:1314983	6480464	GSK-J4 results in decreased expression of IL17RC mRNA	CTD	PMID:29301935
Il17rc	Rat	indometacin	multiple interactions	ISO	RGD:1314983	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] more ...	CTD	PMID:28628672
Il17rc	Rat	ochratoxin A	increases expression	ISO	RGD:1314983	6480464	ochratoxin A results in increased expression of IL17RC mRNA	CTD	PMID:29098329
Il17rc	Rat	ochratoxin A	multiple interactions	ISO	RGD:1314983	6480464	[ochratoxin A results in increased acetylation of IL17RC promoter] which results in increased expression of more ...	CTD	PMID:29098329
Il17rc	Rat	ochratoxin A	increases acetylation	ISO	RGD:1314983	6480464	ochratoxin A results in increased acetylation of IL17RC promoter	CTD	PMID:29098329
Il17rc	Rat	ozone	multiple interactions	ISO	RGD:1314983	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in decreased expression of more ...	CTD	PMID:32699268
Il17rc	Rat	ozone	multiple interactions	ISO	RGD:1618205	6480464	[Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in decreased more ...	CTD	PMID:34911549
Il17rc	Rat	parathion	increases methylation	ISO	RGD:1314983	6480464	Parathion results in increased methylation of IL17RC promoter	CTD	PMID:22847954
Il17rc	Rat	perfluorohexanesulfonic acid	increases expression	ISO	RGD:1618205	6480464	perfluorohexanesulfonic acid results in increased expression of IL17RC mRNA	CTD	PMID:37995155
Il17rc	Rat	pirinixic acid	decreases expression	ISO	RGD:1618205	6480464	pirinixic acid results in decreased expression of IL17RC mRNA	CTD	PMID:17426115
Il17rc	Rat	pirinixic acid	increases expression	ISO	RGD:1618205	6480464	pirinixic acid results in increased expression of IL17RC mRNA	CTD	PMID:18301758
Il17rc	Rat	propiconazole	decreases expression	ISO	RGD:1618205	6480464	propiconazole results in decreased expression of IL17RC mRNA	CTD	PMID:21278054
Il17rc	Rat	sarin	increases expression	ISO	RGD:1314983	6480464	Sarin results in increased expression of IL17RC mRNA	CTD	PMID:19522546
Il17rc	Rat	selenium atom	increases expression	ISO	RGD:1314983	6480464	Selenium results in increased expression of IL17RC mRNA	CTD	PMID:19244175
Il17rc	Rat	sodium fluoride	decreases expression	ISO	RGD:1618205	6480464	Sodium Fluoride results in decreased expression of IL17RC mRNA	CTD	PMID:27862939
Il17rc	Rat	terbufos	increases methylation	ISO	RGD:1314983	6480464	terbufos results in increased methylation of IL17RC promoter	CTD	PMID:22847954
Il17rc	Rat	titanium dioxide	decreases methylation	ISO	RGD:1618205	6480464	titanium dioxide results in decreased methylation of IL17RC gene	CTD	PMID:35295148
Il17rc	Rat	triptonide	increases expression	ISO	RGD:1618205	6480464	triptonide results in increased expression of IL17RC mRNA	CTD	PMID:33045310
Il17rc	Rat	valproic acid	increases methylation	ISO	RGD:1314983	6480464	Valproic Acid results in increased methylation of IL17RC gene	CTD	PMID:29154799

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Il17rc	Rat	defense response to fungus	involved_in	ISO	RGD:1618205	1624291	PMID:20554964	RGD	PMID:20554964
Il17rc	Rat	defense response to fungus	involved_in	IEA	UniProtKB:Q8K4C2\|ensembl:ENSMUSP00000055343	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Il17rc	Rat	granulocyte chemotaxis	involved_in	ISO	RGD:1618205	1624291	PMID:20554964	RGD	PMID:20554964
Il17rc	Rat	granulocyte chemotaxis	involved_in	IEA	UniProtKB:Q8K4C2\|ensembl:ENSMUSP00000055343	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Il17rc	Rat	inflammatory response	involved_in	IEA	UniProtKB-KW:KW-0395	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Il17rc	Rat	interleukin-17A-mediated signaling pathway	involved_in	ISO	RGD:1314983	1624291	PMID:20554964	RGD	PMID:20554964
Il17rc	Rat	interleukin-17A-mediated signaling pathway	involved_in	IEA	UniProtKB:Q8NAC3\|ensembl:ENSP00000384969	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Il17rc	Rat	positive regulation of cytokine production involved in inflammatory response	acts_upstream_of_or_within	ISO	RGD:1618205	1624291	MGI:107364 PMID:16785495	RGD	PMID:16785495
Il17rc	Rat	positive regulation of cytokine production involved in inflammatory response	acts_upstream_of_or_within	IEA	UniProtKB:Q8K4C2\|ensembl:ENSMUSP00000055343	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Il17rc	Rat	positive regulation of interleukin-6 production	involved_in	ISO	RGD:1618205	1624291	PMID:20554964	RGD	PMID:20554964
Il17rc	Rat	positive regulation of interleukin-6 production	involved_in	IEA	UniProtKB:Q8K4C2\|ensembl:ENSMUSP00000055343	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Il17rc	Rat	cell surface	located_in	ISO	RGD:1618205	1624291	PMID:20554964	RGD	PMID:20554964
Il17rc	Rat	cell surface	located_in	IEA	UniProtKB:Q8K4C2\|ensembl:ENSMUSP00000055343	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Il17rc	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Il17rc	Rat	plasma membrane	located_in	IEA	UniProtKB:Q8K4C2\|ensembl:ENSMUSP00000055343	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Il17rc	Rat	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Il17rc	Rat	plasma membrane	located_in	ISO	RGD:1618205	1624291	PMID:17911633	RGD	PMID:17911633

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Il17rc	Rat	coreceptor activity	enables	ISO	RGD:1314983	1624291	PMID:20554964	RGD	PMID:20554964
Il17rc	Rat	coreceptor activity	enables	IEA	UniProtKB:Q8NAC3\|ensembl:ENSP00000384969	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Il17rc	Rat	interleukin-17 receptor activity	enables	ISO	RGD:1314983	1624291	PMID:17911633	RGD	PMID:17911633
Il17rc	Rat	interleukin-17 receptor activity	enables	IEA	InterPro:IPR039465	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Il17rc	Rat	interleukin-17 receptor activity	enables	IBA	MGI:107399\|PANTHER:PTN001436609\|UniProtKB:Q8NAC3\|UniProtKB:Q96F46	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Il17rc	Rat	interleukin-17 receptor activity	enables	IEA	UniProtKB:Q8NAC3\|ensembl:ENSP00000384969	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Il17rc	Rat	protein binding	enables	ISO	RGD:1314983	1624291	UniProtKB:O43734\|UniProtKB:Q16552\|UniProtKB:Q96PD4 PMID:24120361, PMID:28827714	RGD	PMID:24120361\|PMID:28827714
Il17rc	Rat	protein binding	enables	ISO	RGD:1618205	1624291	UniProtKB:Q8N7N6 PMID:20554964	RGD	PMID:20554964
Il17rc	Rat	signaling receptor binding	enables	ISO	RGD:1618205	1624291	UniProtKB:Q60943 PMID:20554964	RGD	PMID:20554964
Il17rc	Rat	signaling receptor binding	enables	IEA	UniProtKB:Q8K4C2\|ensembl:ENSMUSP00000055343	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

#	Reference Title	Reference Citation
1.	Bone marrow derived-mesenchymal stem cells downregulate IL17A dependent IL6/STAT3 signaling pathway in CCl4-induced rat liver fibrosis.	Farouk S, etal., PLoS One. 2018 Oct 22;13(10):e0206130. doi: 10.1371/journal.pone.0206130. eCollection 2018.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:8889548	PMID:16785495	PMID:17911633	PMID:20554964

Il17rc
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	148,174,573 - 148,187,071 (+)	NCBI		GRCr8
mRatBN7.2	4	146,618,321 - 146,631,444 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	146,619,004 - 146,631,442 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	152,002,952 - 152,015,394 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	147,783,795 - 147,796,235 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	146,406,105 - 146,418,521 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	145,426,647 - 145,439,845 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	145,427,367 - 145,439,843 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	208,724,714 - 208,737,144 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	149,362,504 - 149,374,934 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	149,608,503 - 149,619,775 (+)	NCBI
Celera	4	135,174,928 - 135,187,360 (+)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

IL17RC
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	9,917,098 - 9,933,621 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	9,917,074 - 9,933,630 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	9,958,782 - 9,975,305 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	9,933,782 - 9,950,314 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	9,894,245 - 9,910,766 (+)	NCBI		Celera
Cytogenetic Map	3	p25.3	NCBI
HuRef	3	9,895,102 - 9,911,628 (+)	NCBI		HuRef
CHM1_1	3	9,908,906 - 9,925,428 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	9,909,121 - 9,925,611 (+)	NCBI		T2T-CHM13v2.0

Il17rc
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	113,448,416 - 113,460,124 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	113,448,388 - 113,460,101 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	113,471,455 - 113,483,163 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	113,471,427 - 113,483,140 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	113,421,449 - 113,433,132 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	113,437,351 - 113,448,915 (+)	NCBI		MGSCv36	mm8
Celera	6	115,298,416 - 115,310,099 (+)	NCBI		Celera
Cytogenetic Map	6	E3	NCBI
cM Map	6	52.77	NCBI

Il17rc
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955561	1,410,941 - 1,423,023 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955561	1,410,100 - 1,423,041 (+)	NCBI	ChiLan1.0	ChiLan1.0

IL17RC
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	9,920,929 - 9,937,679 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	9,925,695 - 9,942,438 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	9,861,423 - 9,878,154 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	10,210,241 - 10,226,796 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	10,210,241 - 10,226,796 (+)	Ensembl	panpan1.1		panPan2

IL17RC
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	8,342,622 - 8,355,996 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	8,334,345 - 8,355,387 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	8,376,296 - 8,390,079 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	8,371,888 - 8,385,638 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	8,371,888 - 8,384,687 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	8,094,198 - 8,107,969 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	8,439,708 - 8,453,451 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	8,412,789 - 8,426,541 (-)	NCBI		UU_Cfam_GSD_1.0

Il17rc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404942	15,627,696 - 15,642,317 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936602	3,267,425 - 3,282,040 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936602	3,267,397 - 3,281,985 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

IL17RC
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	13	66,179,298 - 66,194,750 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	73,254,652 - 73,270,469 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

IL17RC
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	45,944,385 - 45,960,188 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	45,944,669 - 45,960,164 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	120,602,953 - 120,618,740 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Il17rc
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	4,525,556 - 4,536,858 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624731	4,524,090 - 4,536,879 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Il17rc
79 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	56
Count of miRNA genes:	54
Interacting mature miRNAs:	56
Transcripts:	ENSRNOT00000037788
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1582232	Gluco25	Glucose level QTL 25	3.6	0.0023	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	85253748	148090731	Rat
1358352	Srcrt3	Stress Responsive Cort QTL 3	2.29		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	38465774	146803430	Rat
1300116	Hrtrt5	Heart rate QTL 5	3.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	116179486	151161268	Rat
6478693	Anxrr32	Anxiety related response QTL 32		0.00092	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	144639524	182687754	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	26775591	168368347	Rat
631683	Bp116	Blood pressure QTL 116		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	124303370	169303370	Rat
61451	Ciaa4	CIA Autoantibody QTL 4	3.1		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	4	126395976	167139601	Rat
1331738	Bp209	Blood pressure QTL 209	2.979		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	138503169	179293946	Rat
6478700	Anxrr33	Anxiety related response QTL 33		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
1549827	Scl46	Serum cholesterol level QTL 46	3.5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	4	132396220	177396220	Rat
731165	Uae21	Urinary albumin excretion QTL 21	2.4	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	4	106649412	151649412	Rat
737821	Hcar9	Hepatocarcinoma resistance QTL 9	3.7		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	4	109866907	167139601	Rat
7411558	Bw133	Body weight QTL 133	13.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	125590636	170590636	Rat
10401796	Kidm48	Kidney mass QTL 48			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	145568712	182687754	Rat
6478718	Anxrr34	Anxiety related response QTL 34		0.00896	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat
1549832	Bss3	Bone structure and strength QTL 3	11		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	4	109827074	154827074	Rat
70177	Xhs1	X-ray hypersensitivity QTL 1	25.1		intestine integrity trait (VT:0010554)	post-insult time to onset of moribundity (CMO:0001896)	4	82798864	152731274	Rat
2303623	Vencon2	Ventilatory control QTL 2	3.8		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	4	135204660	180204660	Rat
1578674	Bmd12	Bone mineral density QTL 12	3.8		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	4	135699135	180699135	Rat
1354660	Salc1	Saline consumption QTL 1	11.26		drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	4	44463908	148090542	Rat
1298082	Stresp4	Stress response QTL 4			blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	50119848	146803430	Rat
737978	Pia23	Pristane induced arthritis QTL 23	5.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	131730738	167139601	Rat
61362	Oia2	Oil induced arthritis QTL 2		0.001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	138503169	173369699	Rat
70201	Gcr1	Gastric cancer resistance QTL 1	2.7		stomach morphology trait (VT:0000470)	stomach tumor susceptibility score (CMO:0002043)	4	120260281	147278687	Rat
70200	Alc18	Alcohol consumption QTL 18	9.2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	4	56647873	149491524	Rat
2293659	Bmd35	Bone mineral density QTL 35	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	4	137755016	181392681	Rat
1331759	Hrtrt13	Heart rate QTL 13	3.54628		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	110275411	168266883	Rat
724535	Cm18	Cardiac mass QTL 18	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	4	118856416	163856416	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	11320076	180699135	Rat
6478754	Anxrr43	Anxiety related response QTL 43		0.14035	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	144639524	182687754	Rat
2302049	Pia32	Pristane induced arthritis QTL 32	5.1	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)	4	105789505	150789505	Rat
724558	Plsm2	Polydactyly-luxate syndrome (PLS) morphotypes QTL 2		0.0003	hindlimb integrity trait (VT:0010563)	hind foot phalanges count (CMO:0001949)	4	132422778	177422778	Rat
6478763	Anxrr46	Anxiety related response QTL 46		0.07428	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	110870972	155870972	Rat
6478760	Anxrr45	Anxiety related response QTL 45		0.06717	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	110870972	155870972	Rat
1331802	Srn5	Serum renin concentration QTL 5	3.045		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	4	119428175	157578333	Rat
1298524	Oia8	Oil induced arthritis QTL 8			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	138503169	173369699	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	59948935	154902892	Rat
2312567	Glom19	Glomerulus QTL 19	1.9	0.006	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	4	45456990	146803430	Rat
7207480	Bss105	Bone structure and strength QTL 105	8.1		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	4	109827074	154827074	Rat
634335	Anxrr16	Anxiety related response QTL 16	7.22		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	93308457	167139447	Rat
6478778	Anxrr51	Anxiety related response QTL 51		0.25384	locomotor behavior trait (VT:0001392)	measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)	4	124778595	169778595	Rat
61406	Scwia1	Streptococcal cell wall induced arthritis QTL 1	2.3		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	4	106805662	151805662	Rat
631511	Pia7	Pristane induced arthritis QTL 7	4.3		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	131730738	167139601	Rat
1354612	Foco1	Food consumption QTL 1	8.87		eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	4	44463908	148090542	Rat
634347	Hcar8	Hepatocarcinoma resistance QTL 8	5.8		liver integrity trait (VT:0010547)	liver tumorous lesion area to total liver area ratio (CMO:0001075)	4	123143783	168143783	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	59948935	154902892	Rat
1576316	Ept5	Estrogen-induced pituitary tumorigenesis QTL 5	3.8		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	4	83428419	177635233	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	44463720	155883716	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	59948935	154902892	Rat
1358202	Gluco11	Glucose level QTL 11	2.4	0.02	adipocyte glucose uptake trait (VT:0004185)	absolute change in adipocyte glucose uptake (CMO:0000873)	4	85379421	167139601	Rat
61422	Cia13	Collagen induced arthritis QTL 13	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	132642577	167139601	Rat
634342	Cia24	Collagen induced arthritis QTL 24	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	146565735	175236377	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	64528739	157573521	Rat
2293840	Kiddil9	Kidney dilation QTL 9	2.9		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	4	120926564	148090731	Rat
12798519	Anxrr54	Anxiety related response QTL 54	2.54	0.05	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	114627026	159627026	Rat
12798523	Anxrr56	Anxiety related response QTL 56	2.83	0.05	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	85253748	150276390	Rat
61434	Cia3	Collagen induced arthritis QTL 3	4.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	103194656	148194656	Rat
12798527	Anxrr58	Anxiety related response QTL 58	4.11	0.05	locomotor behavior trait (VT:0001392)	distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)	4	119463257	147278687	Rat
6478748	Anxrr42	Anxiety related response QTL 42		0.28008	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	144639524	182687754	Rat

RH130637

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	4	148,173,539 - 148,173,764 (+)	Marker Load Pipeline
mRatBN7.2	4	146,617,915 - 146,618,140 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	145,426,318 - 145,426,542	NCBI	Rnor6.0
Rnor_5.0	4	208,723,617 - 208,723,841	UniSTS	Rnor5.0
RGSC_v3.4	4	149,361,407 - 149,361,631	UniSTS	RGSC3.4
Celera	4	135,173,831 - 135,174,055	UniSTS
RH 3.4 Map	4	936.6	UniSTS
Cytogenetic Map	4	q42	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001170565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592574	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039107419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285881	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063285888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005503200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC117950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BQ192107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB764502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB793227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB802860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CN541827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DV727885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000037788 ⟹ ENSRNOP00000037747

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	146,619,011 - 146,631,442 (+)	Ensembl
Rnor_6.0 Ensembl	4	145,427,367 - 145,439,843 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095512 ⟹ ENSRNOP00000085036

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	146,619,004 - 146,631,441 (+)	Ensembl

RefSeq Acc Id:

NM_001170565 ⟹ NP_001164036

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,174,628 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,619,004 - 146,631,444 (+)	NCBI
Rnor_6.0	4	145,427,415 - 145,439,845 (+)	NCBI
Rnor_5.0	4	208,724,714 - 208,737,144 (+)	NCBI
Celera	4	135,174,928 - 135,187,360 (+)	NCBI

Sequence:

show sequence

CCACGCGTCCGAAACTGGGCCGGGAGTCCAGGCTCACAGGAGTGGGACAGCATGGCTTGAGAGGAATTCTANCCCTTGCTCTCTCCCTGGGACACGTGATTGATTGGCAGCAGGGGAGAGGGGTCTGC
CCCCCCTTGGGGGGGGGCAGAACGGGGCCTCAGGCCTGGGTGCTGTCTGGCACCTGGAAGATGCCTGTGCCCTGGTTCCTGCTGTCCTTGGCACTGGGCCGAAGCCCCGTGGTCGTTTCCCTGGAGAG
ACTCATGGAGCCTCAGGACACTGCACACTGCTCTCTAGGCCTCTCCTGCCACCTCTGGGATGGTGACGTGCTCTGCCTGCCTGGAAGCATCGAGTCTGCCCCAGGCCCTGTGCTAGTGCCTACCCGCC
TGCAGACGGAGCTGGTACTCAGGTGTCCACAAGAGACAGATTGCGCCCTCTGTGTCCGTGTGGTTGTACACTTGGCTGTGCATGGGCACTGGGAAGAGCCCGAAGAAGCTGGAAAGTCTGATTCAGAA
CTCCAGGGGCCTAGGAACGCCTCTCTCCAGGCCCAGGTGGTGCTCTCCTTTCAGGCCTACCCCATTGCTCGCTGTGCCCTGCTGGAGGTCCAGGTGCCTGCTGACCTGGTGCAGCCTGGTCAGTCCGT
GGGTTCTGCAGTATTTGACTGTTTTGAGGCTGGTCTTGGGGCTGAGGTACGAATCTGGTCCTACACCAAACCCAGGTACCAGAAAGAACTCAACGTCACGCAGCAGTTGCCTGACTGCAGGGGTCTCG
AAGTCCAGGACAGCATCCAGAGCTGCTGGGCCCTACCCTGGCTCAATGTGTCTACAGATGGTGACAATGTTCTTCTGATACTGGACGTCTCTAAGGAGCAGAAATTTGGCTTCTTACTATACTGGGAT
CAGGCCCAGGGTCCTCTCAAATCCTTGTTGTACAAAAACCTGACTGGACCTCAGAACATTACTTTAAACCACACTGACCTGGTTCCCTGCCTCTGCATTCAGTTATGGTCTCAGGAGCCAGACTCTGT
TAGGACCAGCTTCTGCCCCTTCAAGAAAGATCCCCGTGCACACAGGAACCTTTGGCACATGGCCAGGCTGCGGGTGCAGTCCTCAGGGAGCTGGCTGCTAGACACGCCTTGCTCTCTACGGACCGAGG
TGGCACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCCCTTGTGCCACCAATGCCCCAGAAGAATGTCACTATGAATAGGCCATTTGAGTTCCCATTGGTGAAAGAACACCCCAACCTCTGT
GTCCAGGTGAGCAGCTGGGAGAAGGTTGAGCTCCAAGAGTGCTTGTGGGCTGACTCCTTAGGGCCCTTCAAGGATGATATGCTGTTAGTGGAGATGAAAACTGACCTAAACGACACATCAGTCTGTGC
CTTGGAACCCAGTGGCTGTACACCACTGCCTAGTGTTGCCTCCACGAGAGCTGCTCGCCTTGGAGAGCAGTTGCTTCTAGACTTCAGGACACACCAGTGCATGCAGCTGTGGAATGATGATGACCTGG
GATCACTGTGGGCCTGCCCCATGGACAAGTACATCCACAAGCGCTGGGTCCTAGTGTGGCTGGCCTGCCTACTCTTGGCTGCGGCGCTTTTCTTCTTCCTCCTTTTAAAAAAGGACCGCAGGAAAGCG
GCCCCTCGTGCCCGCCCGGCCCTGCTTCTCCACTCGGCCGATGGAGCATACTACGAGCGTCTGGTGGGCGCTCTGGCGTCCGCGTTGAGCCAGATGCCACTGCGCGTTGCCGTGGACCTGTGGAGCCG
CCGCGAGCTGACCGCGCACGGAGCCCTGGCCTGGTTCCACCAGCAACGGCGCCGGACCCTGCAGGAGGATGGCGTGGTCATACTTCTCTTCTCACCCGCGGCCGTGGCGCAGTGTCAGCAGTGGCTGC
AGCTCCAGACGGTGGAGCCCGGGCCGCATGACGCTCTGGCCGCCTGGCTCAGCTGCGTGCTGCCCGATTTCCTGCAAGGCCAGGCGACCGGCCGCTACGTCGGGGTCTACTTTGACGGGCTGCTGCAC
CCAGACACTGTACCCGCCCTGTTCCGCGTCGCGCCGCTCTTCTCCCTGCCCTCGCAGCTGCCGGCCTTCCTGGATGCACTGCAGGGAAGCAGCTCCCAGTCCCCCGGGCGACCTGCGGACAGGGCGGA
ACGAGTGGCCCAGGCGCTGCTGTCCGCCCTAGACAGCTGTACTTAGAGCTCGGAAGCCCCAGGCTGCCGCGAGGAATGGGACCTGGGACCCTGCCCTGCACTCGAATAAAGGCCGATGCAGTATTCCT
AAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017592577 ⟹ XP_017448066

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,174,581 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,618,321 - 146,631,444 (+)	NCBI
Rnor_6.0	4	145,426,647 - 145,439,845 (+)	NCBI

Sequence:

show sequence

AAGCTTGCCCTAGGCTTGTTCTAGAACACTTCACCAGCCCAAGGCCTTTCATTCATACTGTCCT
CTGTGGCCTCATTCCCACAGGCATTGCCTGTGAAGGGCAAGGAGGACCCAGTGCCTCCTGGATCCTCTCCTCCCTATGATTCTTCCAAGAGCAAAGGAAAACCTGAACCTCAGTTAGGCAGCACGTCC
TTCCCCACCCTTCCAATCCCAGCAATGGAACAGCAGAACCTCTGCTGAGTGCTGAGTCTCCCAGGACTGACTGCCCTGCCGGCTCCCTAGAACCTGGGCCAGGCAGCAGAGAGCTCACTTTCTGGTGC
CTTTGGATCAGTCCACTGTCTTCAGAGTTTCTGTTTCACGAAGGTCACTGTCACTGAGGCCCAGGGAAGTACTTGAAAAACCTAAGCATAGTAAGAGGGGACCCAGTGGGCCTTAGGATCCCAGGGTC
ATACAGGAAGTGGAAACACCAGGAAGTGGAAACACCCAGGATGCCATAAGCCTGGGGTCTTCGTGATCAGATCGATCAGAACCTTTGCTTTCTGTGAGATCCAGGGTAAGAGTTCCTTTACTCAATGG
TGCTCCAACTGTGCTGCCTTCCCAGGGCCCCTCCCAGCCAGGTGCCAGCCAAAGAGGAGGAGGAGGAGAGGCCACCACCCAGGTCCAAAGCTGCTGGCTGGCTCCTAAGCCTGGAGTTGGTGGGAGGG
ACGGGACAGGGCGGGGCGGGAACAGCCACTGCCTGCTGGGAGCCAAATCGAAAGCACTCCAGCTGAAACTGGGCCGGGAGTCCAGGCTCACAGGAGTGGGACAGCATGGCTTGAGAGGAATTCTAGCC
CTTGCTCTCTCCCTGGGACACGTGATTGATTGGCAGCAGGGGAGAGGGGTCTGCCCCCCCTTGGGGGGGGCAGAACGGGGCCTCAGGCCTGGGTGCTGTCTGGCACCTGGAAGATGCCTGTGCCCTGG
TTCCTGCTGTCCTTGGCACTGGGCCGAAGCCCCGTGGTCGTTTCCCTGGAGAGACTCATGGAGCCTCAGGACACTGCACACTGCTCTCTAGGCCTCTCCTGCCACCTCTGGGATGGTGACGTGCTCTG
CCTGCCTGGAAGCATCGAGTCTGCCCCAGGCCCTGTGCTAGTGCCTACCCGCCTGCAGACGGAGCTGGTACTCAGGTGTCCACAAGAGACAGATTGCGCCCTCTGTGTCCGTGTGGTTGTACACTTGG
CTGTGCATGGGCACTGGGAAGAGCCCGAAGAAGCTGGAAAGTCTGATTCAGAACTCCAGGGGCCTAGGAACGCCTCTCTCCAGGCCCAGGTGGTGCTCTCCTTTCAGGCCTACCCCATTGCTCGCTGT
GCCCTGCTGGAGGTCCAGGTGCCTGCTGACCTGGTGCAGCCTGGTCAGTCCGTGGGTTCTGCAGTATTTGACTGTTTTGAGGCTGGTCTTGGGGCTGAGGTACGAATCTGGTCCTACACCAAACCCAG
GTACCAGAAAGAACTCAACGTCACGCAGCAGTTGCCTGACTGCAGGGGTCTCGAAGTCCAGGACAGCATCCAGAGCTGCTGGGCCCTACCCTGGCTCAATGTGTCTACAGATGGTGACAATGTTCTTC
TGATACTGGACGTCTCTAAGGAGCAGAAATTTGGCTTCTTACTATACTGGGATCAGGCCCAGGGTCCTCTCAAATCCTTGTTGTACAAAAACCTGACTGGACCTCAGAACATTACTTTAAACCACACT
GACCTGGTTCCCTGCCTCTGCATTCAGTTATGGTCTCAGGAGCCAGACTCTGTTAGGACCAGCTTCTGCCCCTTCAAGAAAGATCCCCGTGCACACAGGAACCTTTGGCACATGGCCAGGCTGCGGGT
GCAGTCCTCAGGGAGCTGGCTGCTAGACACGCCTTGCTCTCTACGGACCGAGGTGGCACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCCCTTGTGCCACCAATGCCCCAGAAGAATGTCA
CTATGAATAGGCCATTTGAGTTCCCATTGGTGAAAGAACACCCCAACCTCTGTGTCCAGGTGAGCAGCTGGGAGAAGGTTGAGCTCCAAGAGTGCTTGTGGGCTGACTCCTTAGGGCCCTTCAAGGAT
GATATGCTGTTAGTGGAGATGAAAACTGACCTAAACGACACATCAGTCTGTGCCTTGGAACCCAGTGGCTGTACACCACTGCCTAGTGTTGCCTCCACGGTGACAGCCCCTCCCCCTCCCTTGACTTG
GCAGAGAGCTGCTCGCCTTGGAGAGCAGTTGCTTCTAGACTTCAGGACACACCAGTGCATGCAGCTGTGGAATGATGATGACCTGGGATCACTGTGGGCCTGCCCCATGGACAAGTACATCCACAAGC
GCTGGGTCCTAGTGTGGCTGGCCTGCCTACTCTTGGCTGCGGCGCTTTTCTTCTTCCTCCTTTTAAAAAAGGACCGCAGGAAAGCGGCCCCTCGTGCCCGCCCGGCCCTGCTTCTCCACTCGGCCGAT
GGAGCATACTACGAGCGTCTGGTGGGCGCTCTGGCGTCCGCGTTGAGCCAGATGCCACTGCGCGTTGCCGTGGACCTGTGGAGCCGCCGCGAGCTGACCGCGCACGGAGCCCTGGCCTGGTTCCACCA
GCAACGGCGCCGGACCCTGCAGGAGGATGGCGTGGTCATACTTCTCTTCTCACCCGCGGCCGTGGCGCAGTGTCAGCAGTGGCTGCAGCTCCAGACGGTGGAGCCCGGGCCGCATGACGCTCTGGCCG
CCTGGCTCAGCTGCGTGCTGCCCGATTTCCTGCAAGGCCAGGCGACCGGCCGCTACGTCGGGGTCTACTTTGACGGGCTGCTGCACCCAGACACTGTACCCGCCCTGTTCCGCGTCGCGCCGCTCTTC
TCCCTGCCCTCGCAGCTGCCGGCCTTCCTGGATGCACTGCAGGGAAGCAGCTCCCAGTCCCCCGGGCGACCTGCGGACAGGGCGGAACGAGTGGCCCAGGCGCTGCTGTCCGCCCTAGACAGCTGTAC
TTAGAGCTCGGAAGCCCCAGGCTGCCGCGAGGAATGGGACCTGGGACCCTGCCCTGCACTCGAATAAAGGCCGATGCAGTATTCCTAA

hide sequence

RefSeq Acc Id:

XM_017592578 ⟹ XP_017448067

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,174,579 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,618,321 - 146,631,444 (+)	NCBI
Rnor_6.0	4	145,426,647 - 145,439,845 (+)	NCBI

Sequence:

show sequence

AAGCTTGCCCTAGGCTTGTTCTAGAACACTTCACCAGCCCAAGGCCTTTCATTCATACTGTCCTCTGTGGCCTCATTCCCACAGGCATTGCCTGTGAAGGGCAAGGAGGACCCAGTGCCTCCTGGATC
CTCTCCTCCCTATGATTCTTCCAAGAGCAAAGGAAAACCTGAACCTCAGTTAGGCAGCACGTCCTTCCCCACCCTTCCAATCCCAGCAATGGAACAGCAGAACCTCTGCTGAGTGCTGAGTCTCCCAG
GACTGACTGCCCTGCCGGCTCCCTAGAACCTGGGCCAGGCAGCAGAGAGCTCACTTTCTGGTGCCTTTGGATCAGTCCACTGTCTTCAGAGTTTCTGTTTCACGAAGGTCACTGTCACTGAGGCCCAG
GGAAGTACTTGAAAAACCTAAGCATAGTAAGAGGGGACCCAGTGGGCCTTAGGATCCCAGGGTCATACAGGAAGTGGAAACACCAGGAAGTGGAAACACCCAGGATGCCATAAGCCTGGGGTCTTCGT
GATCAGATCGATCAGAACCTTTGCTTTCTGTGAGATCCAGGGTAAGAGTTCCTTTACTCAATGGTGCTCCAACTGTGCTGCCTTCCCAGGGCCCCTCCCAGCCAGGTGCCAGCCAAAGAGGAGGAGGA
GGAGAGGCCACCACCCAGGTCCAAAGCTGCTGGCTGGCTCCTAAGCCTGGAGTTGGTGGGAGGGACGGGACAGGGCGGGGCGGGAACAGCCACTGCCTGCTGGGAGCCAAATCGAAAGCACTCCAGCT
GAAACTGGGCCGGGAGTCCAGGCTCACAGGAGTGGGACAGCATGGCTTGAGAGGAATTCTAGCCCTTGCTCTCTCCCTGGGACACGTGATTGATTGGCAGCAGGGGAGAGGGGTCTGCCCCCCCTTGG
GGGGGGCAGAACGGGGCCTCAGGCCTGGGTGCTGTCTGGCACCTGGAAGATGCCTGTGCCCTGGTTCCTGCTGTCCTTGGCACTGGGCCGAAGCCCCGTGGTCGTTTCCCTGGAGAGACTCATGGAGC
CTCAGGACACTGCACACTGCTCTCTAGGCCTCTCCTGCCACCTCTGGGATGGTGACGTGCTCTGCCTGCCTGGAAGCATCGAGTCTGCCCCAGGCCCTGTGCTAGTGCCTACCCGCCTGCAGACGGAG
CTGGTACTCAGGTGTCCACAAGAGACAGATTGCGCCCTCTGTGTCCGTGTGGTTGTACACTTGGCTGTGCATGGGCACTGGGAAGAGCCCGAAGAAGCTGGAAAGTCTGATTCAGAACTCCAGGGGCC
TAGGAACGCCTCTCTCCAGGCCCAGGTGGTGCTCTCCTTTCAGGCCTACCCCATTGCTCGCTGTGCCCTGCTGGAGGTCCAGGTGCCTGCTGACCTGGTGCAGCCTGGTCAGTCCGTGGGTTCTGCAG
TATTTGACTGTTTTGAGGCTGGTCTTGGGGCTGAGGTACGAATCTGGTCCTACACCAAACCCAGGTACCAGAAAGAACTCAACGTCACGCAGCAGTTGCCTGCCCTACCCTGGCTCAATGTGTCTACA
GATGGTGACAATGTTCTTCTGATACTGGACGTCTCTAAGGAGCAGAAATTTGGCTTCTTACTATACTGGGATCAGGCCCAGGGTCCTCTCAAATCCTTGTTGTACAAAAACCTGACTGGACCTCAGAA
CATTACTTTAAACCACACTGACCTGGTTCCCTGCCTCTGCATTCAGTTATGGTCTCAGGAGCCAGACTCTGTTAGGACCAGCTTCTGCCCCTTCAAGAAAGATCCCCGTGCACACAGGAACCTTTGGC
ACATGGCCAGGCTGCGGGTGCAGTCCTCAGGGAGCTGGCTGCTAGACACGCCTTGCTCTCTACGGACCGAGGTGGCACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCCCTTGTGCCACCA
ATGCCCCAGAAGAATGTCACTATGAATAGGCCATTTGAGTTCCCATTGGTGAAAGAACACCCCAACCTCTGTGTCCAGGTGAGCAGCTGGGAGAAGGTTGAGCTCCAAGAGTGCTTGTGGGCTGACTC
CTTAGGGCCCTTCAAGGATGATATGCTGTTAGTGGAGATGAAAACTGACCTAAACGACACATCAGTCTGTGCCTTGGAACCCAGTGGCTGTACACCACTGCCTAGTGTTGCCTCCACGGTGACAGCCC
CTCCCCCTCCCTTGACTTGGCAGAGAGCTGCTCGCCTTGGAGAGCAGTTGCTTCTAGACTTCAGGACACACCAGTGCATGCAGCTGTGGAATGATGATGACCTGGGATCACTGTGGGCCTGCCCCATG
GACAAGTACATCCACAAGCGCTGGGTCCTAGTGTGGCTGGCCTGCCTACTCTTGGCTGCGGCGCTTTTCTTCTTCCTCCTTTTAAAAAAGGACCGCAGGAAAGCGGCCCCTCGTGCCCGCCCGGCCCT
GCTTCTCCACTCGGCCGATGGAGCATACTACGAGCGTCTGGTGGGCGCTCTGGCGTCCGCGTTGAGCCAGATGCCACTGCGCGTTGCCGTGGACCTGTGGAGCCGCCGCGAGCTGACCGCGCACGGAG
CCCTGGCCTGGTTCCACCAGCAACGGCGCCGGACCCTGCAGGAGGATGGCGTGGTCATACTTCTCTTCTCACCCGCGGCCGTGGCGCAGTGTCAGCAGTGGCTGCAGCTCCAGACGGTGGAGCCCGGG
CCGCATGACGCTCTGGCCGCCTGGCTCAGCTGCGTGCTGCCCGATTTCCTGCAAGGCCAGGCGACCGGCCGCTACGTCGGGGTCTACTTTGACGGGCTGCTGCACCCAGACACTGTACCCGCCCTGTT
CCGCGTCGCGCCGCTCTTCTCCCTGCCCTCGCAGCTGCCGGCCTTCCTGGATGCACTGCAGGGAAGCAGCTCCCAGTCCCCCGGGCGACCTGCGGACAGGGCGGAACGAGTGGCCCAGGCGCTGCTGT
CCGCCCTAGACAGCTGTACTTAGAGCTCGGAAGCCCCAGGCTGCCGCGAGGAATGGGACCTGGGACCCTGCCCTGCACTCGAATAAAGGCCGATGCAGTATTCCTAA

hide sequence

RefSeq Acc Id:

XM_017592579 ⟹ XP_017448068

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,174,586 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,618,321 - 146,631,444 (+)	NCBI
Rnor_6.0	4	145,426,647 - 145,439,845 (+)	NCBI

Sequence:

show sequence

AAGCTTGCCCTAGGCTTGTTCTAGAACACTTCACCAGCCCAAGGCCTTTCATTCATACTGTCCTCTGTGGCCTCATTCCCACAGGCATTGCCTGTGAAGGGCAAGGAGGACCCAGTGCCTCCTGGATC
CTCTCCTCCCTATGATTCTTCCAAGAGCAAAGGAAAACCTGAACCTCAGTTAGGCAGCACGTCCTTCCCCACCCTTCCAATCCCAGCAATGGAACAGCAGAACCTCTGCTGAGTGCTGAGTCTCCCAG
GACTGACTGCCCTGCCGGCTCCCTAGAACCTGGGCCAGGCAGCAGAGAGCTCACTTTCTGGTGCCTTTGGATCAGTCCACTGTCTTCAGAGTTTCTGTTTCACGAAGGTCACTGTCACTGAGGCCCAG
GGAAGTACTTGAAAAACCTAAGCATAGTAAGAGGGGACCCAGTGGGCCTTAGGATCCCAGGGTCATACAGGAAGTGGAAACACCAGGAAGTGGAAACACCCAGGATGCCATAAGCCTGGGGTCTTCGT
GATCAGATCGATCAGAACCTTTGCTTTCTGTGAGATCCAGGGTAAGAGTTCCTTTACTCAATGGTGCTCCAACTGTGCTGCCTTCCCAGGGCCCCTCCCAGCCAGGTGCCAGCCAAAGAGGAGGAGGA
GGAGAGGCCACCACCCAGGTCCAAAGCTGCTGGCTGGCTCCTAAGCCTGGAGTTGGTGGGAGGGACGGGACAGGGCGGGGCGGGAACAGCCACTGCCTGCTGGGAGCCAAATCGAAAGCACTCCAGCT
GAAACTGGGCCGGGAGTCCAGGCTCACAGGAGTGGGACAGCATGGCTTGAGAGGAATTCTAGCCCTTGCTCTCTCCCTGGGACACGTGATTGATTGGCAGCAGGGGAGAGGGGTCTGCCCCCCCTTGG
GGGGGGCAGAACGGGGCCTCAGGCCTGGGTGCTGTCTGGCACCTGGAAGATGCCTGTGCCCTGGTTCCTGCTGTCCTTGGCACTGGGCCGAAGCCCCGTGGTCGTTTCCCTGGAGAGACTCATGGAGC
CTCAGGACACTGCACACTGCTCTCTAGGCCTCTCCTGCCACCTCTGGGATGGTGACGTGCTCTGCCTGCCTGGAAGCATCGAGTCTGCCCCAGGCCCTGTGCTAGTGCCTACCCGCCTGCAGACGGAG
CTGGTACTCAGGTGTCCACAAGAGACAGATTGCGCCCTCTGTGTCCGTGTGGTTGTACACTTGGCTGTGCATGGGCACTGGGAAGAGCCCGAAGAAGCTGGAAAGTCTGATTCAGAACTCCAGGGGCC
TAGGAACGCCTCTCTCCAGGCCCAGGTGGTGCTCTCCTTTCAGGCCTACCCCATTGCTCGCTGTGCCCTGCTGGAGGTCCAGGTGCCTGCTGACCTGGTGCAGCCTGGTCAGTCCGTGGGTTCTGCAG
TATTTGACTGTTTTGAGGCTGGTCTTGGGGCTGAGGTACGAATCTGGTCCTACACCAAACCCAGGTACCAGAAAGAACTCAACGTCACGCAGCAGTTGCCTGCCCTACCCTGGCTCAATGTGTCTACA
GATGGTGACAATGTTCTTCTGATACTGGACGTCTCTAAGGAGCAGAAATTTGGCTTCTTACTATACTGGGATCAGGCCCAGGGTCCTCTCAAATCCTTGTTGTACAAAAACCTGACTGGACCTCAGAA
CATTACTTTAAACCACACTGACCTGGTTCCCTGCCTCTGCATTCAGTTATGGTCTCAGGAGCCAGACTCTGTTAGGACCAGCTTCTGCCCCTTCAAGAAAGATCCCCGTGCACACAGGAACCTTTGGC
ACATGGCCAGGCTGCGGGTGCAGTCCTCAGGGAGCTGGCTGCTAGACACGCCTTGCTCTCTACGGACCGAGGTGGCACTGTGCTGGCAGGCACCAGACCAGAGTCCCTGCCAGCCCCTTGTGCCACCA
ATGCCCCAGAAGAATGTCACTATGAATAGGCCATTTGAGTTCCCATTGGTGAAAGAACACCCCAACCTCTGTGTCCAGGTGAGCAGCTGGGAGAAGGTTGAGCTCCAAGAGTGCTTGTGGGCTGACTC
CTTAGGGCCCTTCAAGGATGATATGCTGTTAGTGGAGATGAAAACTGACCTAAACGACACATCAGTCTGTGCCTTGGAACCCAGTGGCTGTACACCACTGCCTAGTGTTGCCTCCACGAGAGCTGCTC
GCCTTGGAGAGCAGTTGCTTCTAGACTTCAGGACACACCAGTGCATGCAGCTGTGGAATGATGATGACCTGGGATCACTGTGGGCCTGCCCCATGGACAAGTACATCCACAAGCGCTGGGTCCTAGTG
TGGCTGGCCTGCCTACTCTTGGCTGCGGCGCTTTTCTTCTTCCTCCTTTTAAAAAAGGACCGCAGGAAAGCGGCCCCTCGTGCCCGCCCGGCCCTGCTTCTCCACTCGGCCGATGGAGCATACTACGA
GCGTCTGGTGGGCGCTCTGGCGTCCGCGTTGAGCCAGATGCCACTGCGCGTTGCCGTGGACCTGTGGAGCCGCCGCGAGCTGACCGCGCACGGAGCCCTGGCCTGGTTCCACCAGCAACGGCGCCGGA
CCCTGCAGGAGGATGGCGTGGTCATACTTCTCTTCTCACCCGCGGCCGTGGCGCAGTGTCAGCAGTGGCTGCAGCTCCAGACGGTGGAGCCCGGGCCGCATGACGCTCTGGCCGCCTGGCTCAGCTGC
GTGCTGCCCGATTTCCTGCAAGGCCAGGCGACCGGCCGCTACGTCGGGGTCTACTTTGACGGGCTGCTGCACCCAGACACTGTACCCGCCCTGTTCCGCGTCGCGCCGCTCTTCTCCCTGCCCTCGCA
GCTGCCGGCCTTCCTGGATGCACTGCAGGGAAGCAGCTCCCAGTCCCCCGGGCGACCTGCGGACAGGGCGGAACGAGTGGCCCAGGCGCTGCTGTCCGCCCTAGACAGCTGTACTTAGAGCTCGGAAG
CCCCAGGCTGCCGCGAGGAATGGGACCTGGGACCCTGCCCTGCACTCGAATAAAGGCCGATGCAGTATTCCTAA

hide sequence

RefSeq Acc Id:

XM_039107408 ⟹ XP_038963336

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,386 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,619,758 - 146,631,444 (+)	NCBI

RefSeq Acc Id:

XM_039107409 ⟹ XP_038963337

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,386 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,619,758 - 146,631,444 (+)	NCBI

RefSeq Acc Id:

XM_039107410 ⟹ XP_038963338

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,386 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,619,758 - 146,631,444 (+)	NCBI

RefSeq Acc Id:

XM_039107411 ⟹ XP_038963339

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,386 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,619,758 - 146,631,444 (+)	NCBI

RefSeq Acc Id:

XM_039107415 ⟹ XP_038963343

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,511 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,619,864 - 146,631,444 (+)	NCBI

RefSeq Acc Id:

XM_039107419 ⟹ XP_038963347

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,182,748 - 148,187,071 (+)	NCBI
mRatBN7.2	4	146,627,123 - 146,631,444 (+)	NCBI

RefSeq Acc Id:

XM_063285881 ⟹ XP_063141951

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,386 - 148,187,071 (+)	NCBI

RefSeq Acc Id:

XM_063285882 ⟹ XP_063141952

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,414 - 148,187,071 (+)	NCBI

RefSeq Acc Id:

XM_063285883 ⟹ XP_063141953

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,386 - 148,187,071 (+)	NCBI

RefSeq Acc Id:

XM_063285884 ⟹ XP_063141954

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,511 - 148,187,071 (+)	NCBI

RefSeq Acc Id:

XM_063285885 ⟹ XP_063141955

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,511 - 148,187,071 (+)	NCBI

RefSeq Acc Id:

XM_063285886 ⟹ XP_063141956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,509 - 148,187,071 (+)	NCBI

RefSeq Acc Id:

XM_063285887 ⟹ XP_063141957

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,175,517 - 148,187,071 (+)	NCBI

RefSeq Acc Id:

XM_063285888 ⟹ XP_063141958

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,174,573 - 148,183,921 (+)	NCBI

RefSeq Acc Id:

XR_005503200

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	148,174,573 - 148,184,213 (+)	NCBI
mRatBN7.2	4	146,618,321 - 146,631,441 (+)	NCBI


Protein RefSeqs	NP_001164036	(Get FASTA)	NCBI Sequence Viewer
	XP_017448066	(Get FASTA)	NCBI Sequence Viewer
	XP_017448067	(Get FASTA)	NCBI Sequence Viewer
	XP_017448068	(Get FASTA)	NCBI Sequence Viewer
	XP_038963336	(Get FASTA)	NCBI Sequence Viewer
	XP_038963337	(Get FASTA)	NCBI Sequence Viewer
	XP_038963338	(Get FASTA)	NCBI Sequence Viewer
	XP_038963339	(Get FASTA)	NCBI Sequence Viewer
	XP_038963343	(Get FASTA)	NCBI Sequence Viewer
	XP_038963347	(Get FASTA)	NCBI Sequence Viewer
	XP_063141951	(Get FASTA)	NCBI Sequence Viewer
	XP_063141952	(Get FASTA)	NCBI Sequence Viewer
	XP_063141953	(Get FASTA)	NCBI Sequence Viewer
	XP_063141954	(Get FASTA)	NCBI Sequence Viewer
	XP_063141955	(Get FASTA)	NCBI Sequence Viewer
	XP_063141956	(Get FASTA)	NCBI Sequence Viewer
	XP_063141957	(Get FASTA)	NCBI Sequence Viewer
	XP_063141958	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL91541	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000037747
	ENSRNOP00000037747.5
	ENSRNOP00000085036
	ENSRNOP00000085036.1

RefSeq Acc Id:	NP_001164036 ⟸ NM_001170565
- Peptide Label:	precursor
- UniProtKB:	D3ZIM0 (UniProtKB/TrEMBL), A6IBS3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVPWFLLSLALGRSPVVVSLERLMEPQDTAHCSLGLSCHLWDGDVLCLPGSIESAPGPVLVPTRLQTELVLRCPQETDCALCVRVVVHLAVHGHWEEPEEAGKSDSELQGPRNASLQAQVVLSFQAY PIARCALLEVQVPADLVQPGQSVGSAVFDCFEAGLGAEVRIWSYTKPRYQKELNVTQQLPDCRGLEVQDSIQSCWALPWLNVSTDGDNVLLILDVSKEQKFGFLLYWDQAQGPLKSLLYKNLTGPQNI TLNHTDLVPCLCIQLWSQEPDSVRTSFCPFKKDPRAHRNLWHMARLRVQSSGSWLLDTPCSLRTEVALCWQAPDQSPCQPLVPPMPQKNVTMNRPFEFPLVKEHPNLCVQVSSWEKVELQECLWADSL GPFKDDMLLVEMKTDLNDTSVCALEPSGCTPLPSVASTRAARLGEQLLLDFRTHQCMQLWNDDDLGSLWACPMDKYIHKRWVLVWLACLLLAAALFFFLLLKKDRRKAAPRARPALLLHSADGAYYER LVGALASALSQMPLRVAVDLWSRRELTAHGALAWFHQQRRRTLQEDGVVILLFSPAAVAQCQQWLQLQTVEPGPHDALAAWLSCVLPDFLQGQATGRYVGVYFDGLLHPDTVPALFRVAPLFSLPSQL PAFLDALQGSSSQSPGRPADRAERVAQALLSALDSCT hide sequence

RefSeq Acc Id:	XP_017448066 ⟸ XM_017592577
- Peptide Label:	isoform X1
- UniProtKB:	A6IBS3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVPWFLLSLALGRSPVVVSLERLMEPQDTAHCSLGLSCHLWDGDVLCLPGSIESAPGPVLVPT RLQTELVLRCPQETDCALCVRVVVHLAVHGHWEEPEEAGKSDSELQGPRNASLQAQVVLSFQAYPIARCALLEVQVPADLVQPGQSVGSAVFDCFEAGLGAEVRIWSYTKPRYQKELNVTQQLPDCRG LEVQDSIQSCWALPWLNVSTDGDNVLLILDVSKEQKFGFLLYWDQAQGPLKSLLYKNLTGPQNITLNHTDLVPCLCIQLWSQEPDSVRTSFCPFKKDPRAHRNLWHMARLRVQSSGSWLLDTPCSLRT EVALCWQAPDQSPCQPLVPPMPQKNVTMNRPFEFPLVKEHPNLCVQVSSWEKVELQECLWADSLGPFKDDMLLVEMKTDLNDTSVCALEPSGCTPLPSVASTVTAPPPPLTWQRAARLGEQLLLDFRT HQCMQLWNDDDLGSLWACPMDKYIHKRWVLVWLACLLLAAALFFFLLLKKDRRKAAPRARPALLLHSADGAYYERLVGALASALSQMPLRVAVDLWSRRELTAHGALAWFHQQRRRTLQEDGVVILLF SPAAVAQCQQWLQLQTVEPGPHDALAAWLSCVLPDFLQGQATGRYVGVYFDGLLHPDTVPALFRVAPLFSLPSQLPAFLDALQGSSSQSPGRPADRAERVAQALLSALDSCT hide sequence

RefSeq Acc Id:	XP_017448067 ⟸ XM_017592578
- Peptide Label:	isoform X2
- UniProtKB:	A6IBS3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVPWFLLSLALGRSPVVVSLERLMEPQDTAHCSLGLSCHLWDGDVLCLPGSIESAPGPVLVPTRLQTELVLRCPQETDCALCVRVVVHLAVHGHWEEPEEAGKSDSELQGPRNASLQAQVVLSFQAY PIARCALLEVQVPADLVQPGQSVGSAVFDCFEAGLGAEVRIWSYTKPRYQKELNVTQQLPALPWLNVSTDGDNVLLILDVSKEQKFGFLLYWDQAQGPLKSLLYKNLTGPQNITLNHTDLVPCLCIQL WSQEPDSVRTSFCPFKKDPRAHRNLWHMARLRVQSSGSWLLDTPCSLRTEVALCWQAPDQSPCQPLVPPMPQKNVTMNRPFEFPLVKEHPNLCVQVSSWEKVELQECLWADSLGPFKDDMLLVEMKTD LNDTSVCALEPSGCTPLPSVASTVTAPPPPLTWQRAARLGEQLLLDFRTHQCMQLWNDDDLGSLWACPMDKYIHKRWVLVWLACLLLAAALFFFLLLKKDRRKAAPRARPALLLHSADGAYYERLVGA LASALSQMPLRVAVDLWSRRELTAHGALAWFHQQRRRTLQEDGVVILLFSPAAVAQCQQWLQLQTVEPGPHDALAAWLSCVLPDFLQGQATGRYVGVYFDGLLHPDTVPALFRVAPLFSLPSQLPAFL DALQGSSSQSPGRPADRAERVAQALLSALDSCT hide sequence

RefSeq Acc Id:	XP_017448068 ⟸ XM_017592579
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I6A339 (UniProtKB/TrEMBL), A6IBS3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVPWFLLSLALGRSPVVVSLERLMEPQDTAHCSLGLSCHLWDGDVLCLPGSIESAPGPVLVPT RLQTELVLRCPQETDCALCVRVVVHLAVHGHWEEPEEAGKSDSELQGPRNASLQAQVVLSFQAYPIARCALLEVQVPADLVQPGQSVGSAVFDCFEAGLGAEVRIWSYTKPRYQKELNVTQQLPALPW LNVSTDGDNVLLILDVSKEQKFGFLLYWDQAQGPLKSLLYKNLTGPQNITLNHTDLVPCLCIQLWSQEPDSVRTSFCPFKKDPRAHRNLWHMARLRVQSSGSWLLDTPCSLRTEVALCWQAPDQSPCQ PLVPPMPQKNVTMNRPFEFPLVKEHPNLCVQVSSWEKVELQECLWADSLGPFKDDMLLVEMKTDLNDTSVCALEPSGCTPLPSVASTRAARLGEQLLLDFRTHQCMQLWNDDDLGSLWACPMDKYIHK RWVLVWLACLLLAAALFFFLLLKKDRRKAAPRARPALLLHSADGAYYERLVGALASALSQMPLRVAVDLWSRRELTAHGALAWFHQQRRRTLQEDGVVILLFSPAAVAQCQQWLQLQTVEPGPHDALA AWLSCVLPDFLQGQATGRYVGVYFDGLLHPDTVPALFRVAPLFSLPSQLPAFLDALQGSSSQSPGRPADRAERVAQALLSALDSCT hide sequence

Ensembl Acc Id:

ENSRNOP00000037747 ⟸ ENSRNOT00000037788

Protein Domains

SEFIR

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZIM0-F1-model_v2	AlphaFold	D3ZIM0	1-677	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13693306

Promoter ID:

EPDNEW_R3829

Type:

multiple initiation site

Name:

Il17rc_1

Description:

interleukin 17 receptor C

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	4	145,427,406 - 145,427,466	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-43377	BioCyc
Ensembl Genes	ENSRNOG00000027376	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000037788	ENTREZGENE
	ENSRNOT00000037788.7	UniProtKB/TrEMBL
	ENSRNOT00000095512	ENTREZGENE
	ENSRNOT00000095512.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.11530	UniProtKB/TrEMBL
InterPro	IL-17_rcpt-like	UniProtKB/TrEMBL
	IL-17_rcpt_C/E_N	UniProtKB/TrEMBL
	SEFIR	UniProtKB/TrEMBL
KEGG Report	rno:297520	UniProtKB/TrEMBL
NCBI Gene	297520	ENTREZGENE
PANTHER	INTERLEUKIN-17 RECEPTOR C	UniProtKB/TrEMBL
	PTHR15583	UniProtKB/TrEMBL
Pfam	IL17_R_N	UniProtKB/TrEMBL
	SEFIR	UniProtKB/TrEMBL
PhenoGen	Il17rc	PhenoGen
PROSITE	SEFIR	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000027376	RatGTEx
UniProt	A0A8I6A339	ENTREZGENE, UniProtKB/TrEMBL
	A6IBS3	ENTREZGENE, UniProtKB/TrEMBL
	D3ZIM0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Il17rc	interleukin 17 receptor C	Il17rc_predicted	interleukin 17 receptor C (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Il17rc_predicted	interleukin 17 receptor C (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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