Acss1 (acyl-CoA synthetase short-chain family member 1) - Rat Genome Database

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Gene: Acss1 (acyl-CoA synthetase short-chain family member 1) Rattus norvegicus
Analyze
Symbol: Acss1
Name: acyl-CoA synthetase short-chain family member 1
RGD ID: 1306246
Description: Enables acetate-CoA ligase activity. Involved in acetate biosynthetic process and propionate biosynthetic process. Predicted to be located in mitochondrial matrix. Predicted to be active in mitochondrion. Orthologous to human ACSS1 (acyl-CoA synthetase short chain family member 1); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; malonic aciduria pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Acas2l; acetyl-Coenzyme A synthetase 2 (AMP forming)-like; acetyl-coenzyme A synthetase 2-like, mitochondrial; LOC296259
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83159,910,809 - 159,960,748 (-)NCBIGRCr8
mRatBN7.23139,450,383 - 139,500,325 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3139,450,383 - 139,500,325 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3143,346,852 - 143,396,694 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03151,930,593 - 151,980,423 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03149,678,658 - 149,728,584 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03146,420,346 - 146,470,293 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3146,420,346 - 146,470,293 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03152,779,621 - 152,829,324 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43141,259,016 - 141,308,871 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13141,164,598 - 141,235,812 (-)NCBI
Celera3138,212,667 - 138,262,509 (-)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Acss1RatExperimental Melanoma treatmentISOACSS1 (Homo sapiens)13831304 RGD 
Acss1RatHypothermia  ISOAcss1 (Mus musculus)13831305 RGD 

1 to 20 of 120 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Acss1Rat(+)-dexrazoxane decreases expressionISOAcss1 (Mus musculus)6480464Dexrazoxane results in decreased expression of ACSS1 mRNACTDPMID:26873546
Acss1Rat(+)-dexrazoxane multiple interactionsISOAcss1 (Mus musculus)6480464[Doxorubicin co-treated with Dexrazoxane] results in increased expression of ACSS1 mRNACTDPMID:26873546
Acss1Rat1,1-dichloroethene decreases expressionISOAcss1 (Mus musculus)6480464vinylidene chloride results in decreased expression of ACSS1 mRNACTDPMID:26682919
Acss1Rat1,2-dimethylhydrazine multiple interactionsISOAcss1 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of ACSS1 mRNACTDPMID:22206623
Acss1Rat17beta-estradiol increases expressionISOAcss1 (Mus musculus)6480464Estradiol results in increased expression of ACSS1 mRNACTDPMID:15289156
Acss1Rat17beta-estradiol decreases expressionISOACSS1 (Homo sapiens)6480464Estradiol results in decreased expression of ACSS1 mRNACTDPMID:31614463
Acss1Rat17beta-estradiol multiple interactionsISOACSS1 (Homo sapiens)6480464[Estradiol co-treated with TGFB1 protein] results in decreased expression of ACSS1 mRNACTDPMID:30165855
Acss1Rat2,2',4,4'-Tetrabromodiphenyl ether increases expressionISOACSS1 (Homo sapiens)64804642 more ...CTDPMID:31675489
Acss1Rat2,2',5,5'-tetrachlorobiphenyl decreases expressionISOACSS1 (Homo sapiens)64804642 more ...CTDPMID:36804509
Acss1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ACSS1 mRNACTDPMID:33387578
Acss1Rat2,4,6-tribromophenol increases expressionISOACSS1 (Homo sapiens)64804642 more ...CTDPMID:31675489
Acss1Rat3,3',5,5'-tetrabromobisphenol A decreases expressionISOACSS1 (Homo sapiens)6480464tetrabromobisphenol A results in decreased expression of ACSS1 proteinCTDPMID:31675489
Acss1Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of ACSS1 mRNACTDPMID:24780913
Acss1Ratacetamide increases expressionEXP 6480464acetamide results in increased expression of ACSS1 mRNACTDPMID:31881176
Acss1Ratacrylamide decreases expressionEXP 6480464Acrylamide results in decreased expression of ACSS1 mRNACTDPMID:28959563
Acss1Ratacrylamide decreases expressionISOACSS1 (Homo sapiens)6480464Acrylamide results in decreased expression of ACSS1 mRNACTDPMID:32763439
Acss1Rataflatoxin B1 decreases expressionISOACSS1 (Homo sapiens)6480464Aflatoxin B1 results in decreased expression of ACSS1 mRNACTDPMID:32234424
Acss1Rataldehydo-D-glucose increases expressionISOACSS1 (Homo sapiens)6480464Glucose results in increased expression of ACSS1 mRNACTDPMID:36156098
Acss1Ratamphetamine decreases expressionEXP 6480464Amphetamine results in decreased expression of ACSS1 mRNACTDPMID:30779732
Acss1Ratarsane multiple interactionsISOAcss1 (Mus musculus)6480464[sodium arsenite results in increased abundance of Arsenic] which results in decreased expression of ACSS1 mRNACTDPMID:32045263

1 to 20 of 120 rows

Biological Process

  

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Acss1Ratmitochondrial matrix located_inISOACSS1 (Homo sapiens)1624291 PMID:16788062RGDPMID:16788062
Acss1Ratmitochondrial matrix located_inISOAcss1 (Mus musculus)1624291 PMID:11150295RGDPMID:11150295
Acss1Ratmitochondrion located_inISOACSS1 (Homo sapiens)9068941 PMID:34800366FlyBasePMID:34800366
Acss1Ratmitochondrion is_active_inIBAMGI:1915988 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033

Molecular Function

  

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Acss1Ratfatty acid beta degradation pathway   ISOACSS1 (Homo sapiens)2317576 RGD 

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Acss1Ratgluconeogenesis pathway   IEA 6907045 KEGGrno:00010
Acss1Ratglycolysis pathway   IEA 6907045 KEGGrno:00010
Acss1Ratglycolysis/gluconeogenesis pathway  IEA 6907045 KEGGrno:00010
Acss1Ratpropanoate metabolic pathway  IEA 6907045 KEGGrno:00640
Acss1Ratpyruvate metabolic pathway   IEA 6907045 KEGGrno:00620

1 to 10 of 10 rows
#
Reference Title
Reference Citation
1. The subcellular distribution of short-chain fatty acyl-CoA synthetase activity in rat tissues. Barth C, etal., Biochim Biophys Acta. 1971 Oct 5;248(1):24-33.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Glucose-independent Acetate Metabolism Promotes Melanoma Cell Survival and Tumor Growth. Lakhter AJ, etal., J Biol Chem. 2016 Oct 14;291(42):21869-21879. doi: 10.1074/jbc.M115.712166. Epub 2016 Aug 18.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Fasting-induced hypothermia and reduced energy production in mice lacking acetyl-CoA synthetase 2. Sakakibara I, etal., Cell Metab. 2009 Feb;9(2):191-202. doi: 10.1016/j.cmet.2008.12.008.
10. Evidence for 26 distinct acyl-coenzyme A synthetase genes in the human genome. Watkins PA, etal., J Lipid Res. 2007 Dec;48(12):2736-50. Epub 2007 Aug 30.
1 to 10 of 10 rows
PMID:11150295   PMID:16788062   PMID:16790548   PMID:18614015   PMID:26945066   PMID:34800366  



Acss1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83159,910,809 - 159,960,748 (-)NCBIGRCr8
mRatBN7.23139,450,383 - 139,500,325 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3139,450,383 - 139,500,325 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3143,346,852 - 143,396,694 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03151,930,593 - 151,980,423 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03149,678,658 - 149,728,584 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03146,420,346 - 146,470,293 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3146,420,346 - 146,470,293 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03152,779,621 - 152,829,324 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43141,259,016 - 141,308,871 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13141,164,598 - 141,235,812 (-)NCBI
Celera3138,212,667 - 138,262,509 (-)NCBICelera
Cytogenetic Map3q41NCBI
ACSS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382025,006,237 - 25,058,139 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2025,006,230 - 25,058,980 (-)EnsemblGRCh38hg38GRCh38
GRCh372024,986,873 - 25,038,775 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362024,934,873 - 24,987,616 (-)NCBINCBI36Build 36hg18NCBI36
Build 342024,934,873 - 24,987,616NCBI
Celera2025,060,679 - 25,113,427 (-)NCBICelera
Cytogenetic Map20p11.21NCBI
HuRef2024,943,703 - 24,995,659 (-)NCBIHuRef
CHM1_12024,987,355 - 25,039,309 (-)NCBICHM1_1
T2T-CHM13v2.02025,070,421 - 25,122,324 (-)NCBIT2T-CHM13v2.0
Acss1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392150,460,031 - 150,510,160 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2150,460,025 - 150,510,420 (-)EnsemblGRCm39 Ensembl
GRCm382150,618,111 - 150,668,240 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2150,618,105 - 150,668,500 (-)EnsemblGRCm38mm10GRCm38
MGSCv372150,443,847 - 150,493,976 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362150,309,552 - 150,359,670 (-)NCBIMGSCv36mm8
Celera2151,852,988 - 151,903,233 (-)NCBICelera
Cytogenetic Map2G3NCBI
cM Map274.74NCBI
Acss1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541531,117,303 - 31,154,654 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541531,117,542 - 31,154,654 (-)NCBIChiLan1.0ChiLan1.0
ACSS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22125,877,357 - 25,932,094 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12025,874,190 - 25,928,929 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02024,946,629 - 25,001,311 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12025,294,186 - 25,348,109 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2025,293,511 - 25,349,017 (-)Ensemblpanpan1.1panPan2
ACSS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1231,192,771 - 1,251,724 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl231,184,392 - 1,252,255 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha231,222,892 - 1,281,311 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0231,435,773 - 1,494,208 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl231,435,776 - 1,494,754 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1231,251,020 - 1,309,471 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0231,381,192 - 1,439,604 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0231,364,196 - 1,422,653 (-)NCBIUU_Cfam_GSD_1.0
Acss1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640147,319,248 - 147,380,019 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936620739,633 - 800,803 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936620739,633 - 800,472 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACSS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1730,800,427 - 30,839,742 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11730,800,536 - 30,839,799 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21734,949,412 - 34,988,665 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103247057
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_0236660872,048,170 - 2,100,706 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acss1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624939394,884 - 435,098 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624939384,003 - 431,485 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Acss1
332 total Variants

Predicted Target Of
Summary Value
Count of predictions:811
Count of miRNA genes:294
Interacting mature miRNAs:391
Transcripts:ENSRNOT00000009627
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 31 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
2298477Eau4Experimental allergic uveoretinitis QTL 40.0011uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)3137398739169034231Rat
1581568Rf53Renal function QTL 53urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)356395968161299569Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3112681431157681431Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3121056165145956249Rat

1 to 10 of 31 rows
D3Rat148  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr83159,917,263 - 159,917,474 (+)Marker Load Pipeline
Rnor_6.03146,426,801 - 146,427,014NCBIRnor6.0
Rnor_5.03152,786,076 - 152,786,289UniSTSRnor5.0
RGSC_v3.43141,265,470 - 141,265,676RGDRGSC3.4
RGSC_v3.43141,265,471 - 141,265,676UniSTSRGSC3.4
RGSC_v3.13141,171,043 - 141,171,249RGD
Celera3138,219,122 - 138,219,291UniSTS
SHRSP x BN Map365.2999RGD
SHRSP x BN Map365.2999UniSTS
Cytogenetic Map3q41UniSTS
BF389773  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23139,463,124 - 139,463,298 (+)MAPPERmRatBN7.2
Rnor_6.03146,433,095 - 146,433,268NCBIRnor6.0
Rnor_5.03152,792,370 - 152,792,543UniSTSRnor5.0
RGSC_v3.43141,271,757 - 141,271,930UniSTSRGSC3.4
Celera3138,225,372 - 138,225,545UniSTS
RH 3.4 Map31197.32UniSTS
Cytogenetic Map3q41UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000009627   ⟹   ENSRNOP00000009627
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3139,450,383 - 139,500,325 (-)Ensembl
Rnor_6.0 Ensembl3146,420,346 - 146,470,293 (-)Ensembl
RefSeq Acc Id: NM_001106524   ⟹   NP_001099994
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83159,910,809 - 159,960,748 (-)NCBI
mRatBN7.23139,450,383 - 139,500,325 (-)NCBI
Rnor_6.03146,420,346 - 146,470,293 (-)NCBI
Rnor_5.03152,779,621 - 152,829,324 (-)NCBI
RGSC_v3.43141,259,016 - 141,308,871 (-)RGD
Celera3138,212,667 - 138,262,509 (-)RGD
Sequence:
Protein RefSeqs NP_001099994 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL86149 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000009627.4
RefSeq Acc Id: NP_001099994   ⟸   NM_001106524
- UniProtKB: D3ZZN3 (UniProtKB/TrEMBL),   A6KHF6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000009627   ⟸   ENSRNOT00000009627
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZZN3-F1-model_v2 AlphaFold D3ZZN3 1-682 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13692516
Promoter ID:EPDNEW_R3041
Type:multiple initiation site
Name:Acss1_1
Description:acyl-CoA synthetase short-chain family member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.03146,470,278 - 146,470,338EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-47349 BioCyc
Ensembl Genes ENSRNOG00000007102 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000009627.6 UniProtKB/TrEMBL
Gene3D-CATH 3.30.300.30 UniProtKB/TrEMBL
  3.40.50.12780 UniProtKB/TrEMBL
InterPro Ac_CoA_lig_AcsA UniProtKB/TrEMBL
  ACAS_N UniProtKB/TrEMBL
  AMP-bd_C_sf UniProtKB/TrEMBL
  AMP-binding_CS UniProtKB/TrEMBL
  AMP-dep_Synth/Lig UniProtKB/TrEMBL
  AMP-dep_Synthh-like_sf UniProtKB/TrEMBL
  DUF4009 UniProtKB/TrEMBL
KEGG Report rno:296259 UniProtKB/TrEMBL
NCBI Gene 296259 ENTREZGENE
PANTHER ACETYL-COENZYME A SYNTHETASE UniProtKB/TrEMBL
  ACETYL-COENZYME A SYNTHETASE 2-LIKE, MITOCHONDRIAL UniProtKB/TrEMBL
Pfam ACAS_N UniProtKB/TrEMBL
  AMP-binding UniProtKB/TrEMBL
  DUF4009 UniProtKB/TrEMBL
PhenoGen Acss1 PhenoGen
PROSITE AMP_BINDING UniProtKB/TrEMBL
RatGTEx ENSRNOG00000007102 RatGTEx
Superfamily-SCOP Acetyl-CoA synthetase-like UniProtKB/TrEMBL
UniProt A6KHF6 ENTREZGENE, UniProtKB/TrEMBL
  D3ZZN3 ENTREZGENE, UniProtKB/TrEMBL
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Acss1  acyl-CoA synthetase short-chain family member 1   Acss1_predicted  acyl-CoA synthetase short-chain family member 1 (predicted)  'predicted' is removed 2292626 APPROVED
2008-01-09 Acss1_predicted  acyl-CoA synthetase short-chain family member 1 (predicted)  LOC681886  similar to acetyl-CoA synthetase 2-like  Data merged from RGD:1590480 1643240 APPROVED
2006-11-20 LOC681886  similar to acetyl-CoA synthetase 2-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-03-30 Acss1_predicted  acyl-CoA synthetase short-chain family member 1 (predicted)  Acas2l_predicted  acetyl-Coenzyme A synthetase 2 (AMP forming)-like (predicted)  Symbol and Name updated 1299863 APPROVED
2005-01-12 Acas2l_predicted  acetyl-Coenzyme A synthetase 2 (AMP forming)-like (predicted)      Symbol and Name status set to approved 70820 APPROVED