Atp5mg (ATP synthase membrane subunit G) - Rat Genome Database

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Gene: Atp5mg (ATP synthase membrane subunit G) Rattus norvegicus
Analyze
Symbol: Atp5mg
Name: ATP synthase membrane subunit G
RGD ID: 1303259
Description: Predicted to enable proton transmembrane transporter activity. Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis. Part of proton-transporting ATP synthase complex. Orthologous to several human genes including ATP5MG (ATP synthase membrane subunit g); PARTICIPATES IN oxidative phosphorylation pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ATP synthase subunit g, mitochondrial; ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G; ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G; Atp5l; ATPase subunit g; MGC72942; similar to CG6105-PA
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8854,122,457 - 54,130,407 (-)NCBIGRCr8
mRatBN7.2845,225,680 - 45,233,630 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl845,225,686 - 45,233,559 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx850,721,063 - 50,728,984 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0848,999,784 - 49,007,705 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0846,870,364 - 46,878,285 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0849,220,441 - 49,227,273 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl849,220,443 - 49,227,273 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0847,838,594 - 47,845,425 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4847,869,992 - 47,876,824 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1847,878,757 - 47,885,590 (-)NCBI
Celera844,811,539 - 44,818,403 (-)NCBICelera
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Atp5mgRatAlzheimer's disease  ISOATP5MG (Homo sapiens)13792588 RGD 
1 to 13 of 13 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Atp5mgRatCD3epsilon deficiency  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: CD3epsilon deficiencyClinVarPMID:14602880 more ...
Atp5mgRatchromosome 11 partial duplication syndrome  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Distal trisomy 11qClinVarPMID:25741868
Atp5mgRatDwarfism  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Short statureClinVarPMID:32581362
Atp5mgRatFamilial Atrial Fibrillation 14  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Atrial fibrillation more ...ClinVarPMID:28492532
Atp5mgRatglycogen storage disease Ib  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Glucose-6-phosphate transport defectClinVarPMID:28492532
Atp5mgRatimmunodeficiency 17  ISOATP5MG (Homo sapiens)8554872ClinVar more ...ClinVarPMID:14602880 more ...
Atp5mgRatimmunodeficiency 18  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Immunodeficiency 18ClinVarPMID:14602880 more ...
Atp5mgRatimmunodeficiency 19  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Immunodeficiency 19ClinVarPMID:14602880 more ...
Atp5mgRatinflammatory bowel disease 28  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Inflammatory bowel disease 28ClinVarPMID:14602880 more ...
Atp5mgRatintellectual disability  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 
Atp5mgRatisolated microphthalmia 5  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Isolated microphthalmia 5ClinVarPMID:28492532
Atp5mgRatlong QT syndrome 10  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: Long QT syndrome 10ClinVarPMID:28492532
Atp5mgRatRASopathy  ISOATP5MG (Homo sapiens)8554872ClinVar Annotator: match by term: RASopathyClinVarPMID:28492532
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1 to 20 of 83 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Atp5mgRat1,2-dimethylhydrazine multiple interactionsISOAtp5mg (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of ATP5MG mRNACTDPMID:22206623
Atp5mgRat1,2-dimethylhydrazine decreases expressionISOAtp5mg (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of ATP5MG mRNACTDPMID:22206623
Atp5mgRat17alpha-ethynylestradiol increases expressionISOAtp5mg (Mus musculus)6480464Ethinyl Estradiol results in increased expression of ATP5MG mRNACTDPMID:17942748
Atp5mgRat17alpha-ethynylestradiol multiple interactionsISOAtp5mg (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ATP5MG mRNACTDPMID:17942748
Atp5mgRat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of ATP5MG proteinCTDPMID:32145629
Atp5mgRat2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOAtp5mg (Mus musculus)6480464[2 more ...CTDPMID:25510870
Atp5mgRat2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOAtp5mg (Mus musculus)6480464[2 more ...CTDPMID:25510870
Atp5mgRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOAtp5mg (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of ATP5MG mRNACTDPMID:21570461
Atp5mgRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ATP5MG mRNACTDPMID:34747641
Atp5mgRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOAtp5mg (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of ATP5MG mRNACTDPMID:20399798
Atp5mgRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOAtp5mg (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ATP5MG mRNACTDPMID:17942748
Atp5mgRat4,4'-diaminodiphenylmethane affects expressionISOAtp5mg (Mus musculus)64804644 and 4'-diaminodiphenylmethane affects the expression of ATP5MG mRNACTDPMID:18648102
Atp5mgRat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of ATP5MG mRNACTDPMID:30047161
Atp5mgRatacetamide decreases expressionEXP 6480464acetamide results in decreased expression of ATP5MG mRNACTDPMID:31881176
Atp5mgRataflatoxin B1 decreases methylationISOATP5MG (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of ATP5MG geneCTDPMID:27153756
Atp5mgRatalpha-Zearalanol multiple interactionsEXP 6480464[Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of ATP5MG mRNA and [Zeranol co-treated with perfluorooctanoic acid] results in increased expression of ATP5MG mRNACTDPMID:35163327
Atp5mgRatamitrole increases expressionEXP 6480464Amitrole results in increased expression of ATP5MG mRNACTDPMID:30047161
Atp5mgRatarsenite(3-) decreases expressionISOAtp5mg (Mus musculus)6480464arsenite results in decreased expression of ATP5MG mRNACTDPMID:33053406
Atp5mgRatarsenite(3-) multiple interactionsISOATP5MG (Homo sapiens)6480464arsenite promotes the reaction [G3BP1 protein binds to ATP5MG mRNA] and arsenite promotes the reaction [G3BP1 protein binds to ATP5MG protein]CTDPMID:32406909
Atp5mgRatatrazine increases expressionISOATP5MG (Homo sapiens)6480464Atrazine results in increased expression of ATP5MG mRNACTDPMID:22378314

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Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Atp5mgRatproton motive force-driven ATP synthesis involved_inIEAInterPro:IPR0068081600115GO_REF:0000002InterProGO_REF:0000002
Atp5mgRatproton motive force-driven ATP synthesis involved_inIBAPANTHER:PTN000273103 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Atp5mgRatproton motive force-driven mitochondrial ATP synthesis involved_inISOATP5MG (Homo sapiens)1624291 PMID:12110673RGDPMID:12110673
Atp5mgRatproton transmembrane transport involved_inIEAUniProtKB-KW:KW-03751600115GO_REF:0000043UniProtGO_REF:0000043

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Atp5mgRatmitochondrial inner membrane located_inIEAUniProtKB-SubCell:SL-01681600115GO_REF:0000044UniProtGO_REF:0000044
Atp5mgRatmitochondrial membrane located_inIEAUniProtKB-SubCell:SL-01711600115GO_REF:0000044UniProtGO_REF:0000044
Atp5mgRatmitochondrion located_inISOATP5MG (Homo sapiens)1624291 RGDGO_REF:0000052 and GO_REF:0000054
Atp5mgRatproton-transporting ATP synthase complex  IDA 2292427 RGD 
Atp5mgRatproton-transporting ATP synthase complex part_ofIEAUniProtKB-KW:KW-01381600115GO_REF:0000043UniProtGO_REF:0000043
Atp5mgRatproton-transporting ATP synthase complex part_ofISOATP5MG (Homo sapiens)1624291 PMID:12110673RGDPMID:12110673
Atp5mgRatproton-transporting ATP synthase complex part_ofIDA 8553598PMID:17575325UniProt 

Molecular Function

  

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Atp5mgRatoxidative phosphorylation pathway  IEA 6907045 KEGGrno:00190

BioCyc Pathways


1 to 9 of 9 rows
#
Reference Title
Reference Citation
1. Reduced Mitochondrial Activity is Early and Steady in the Entorhinal Cortex but it is Mainly Unmodified in the Frontal Cortex in Alzheimer's Disease. Armand-Ugon M, etal., Curr Alzheimer Res. 2017;14(12):1327-1334. doi: 10.2174/1567205014666170505095921.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Mitochondrial F(0)F(1) ATP synthase. Subunit regions on the F1 motor shielded by F(0), Functional significance, and evidence for an involvement of the unique F(0) subunit F(6). Ko YH, etal., J Biol Chem. 2000 Oct 20;275(42):32931-9.
4. Identification of two proteins associated with mammalian ATP synthase. Meyer B, etal., Mol Cell Proteomics. 2007 Oct;6(10):1690-9. Epub 2007 Jun 17.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. GOA pipeline RGD automated data pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
1 to 9 of 9 rows
PMID:12110673   PMID:12865426   PMID:14651853   PMID:18614015   PMID:23376485   PMID:29476059  



Atp5mg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8854,122,457 - 54,130,407 (-)NCBIGRCr8
mRatBN7.2845,225,680 - 45,233,630 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl845,225,686 - 45,233,559 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx850,721,063 - 50,728,984 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0848,999,784 - 49,007,705 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0846,870,364 - 46,878,285 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0849,220,441 - 49,227,273 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl849,220,443 - 49,227,273 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0847,838,594 - 47,845,425 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4847,869,992 - 47,876,824 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1847,878,757 - 47,885,590 (-)NCBI
Celera844,811,539 - 44,818,403 (-)NCBICelera
Cytogenetic Map8q22NCBI
ATP5MG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811118,401,606 - 118,409,847 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11118,401,346 - 118,433,278 (+)EnsemblGRCh38hg38GRCh38
GRCh3711118,272,321 - 118,280,562 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3611117,777,314 - 117,785,772 (+)NCBINCBI36Build 36hg18NCBI36
Build 3411117,777,313 - 117,785,771NCBI
Celera11115,429,967 - 115,438,425 (+)NCBICelera
Cytogenetic Map11q23.3NCBI
HuRef11114,206,232 - 114,214,690 (+)NCBIHuRef
CHM1_111118,158,560 - 118,167,018 (+)NCBICHM1_1
T2T-CHM13v2.011118,417,857 - 118,426,099 (+)NCBIT2T-CHM13v2.0
Atp5mg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39944,824,546 - 44,832,470 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl944,823,855 - 44,832,040 (-)EnsemblGRCm39 Ensembl
GRCm38944,913,248 - 44,920,742 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl944,912,557 - 44,920,742 (-)EnsemblGRCm38mm10GRCm38
MGSCv37944,721,331 - 44,728,825 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36944,664,264 - 44,671,693 (-)NCBIMGSCv36mm8
Celera942,178,549 - 42,186,041 (-)NCBICelera
Cytogenetic Map9A5.2NCBI
cM Map924.84NCBI
Atp5mg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541219,555,736 - 19,563,094 (+)NCBIChiLan1.0ChiLan1.0
ATP5MG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29119,097,507 - 119,110,189 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111120,207,603 - 120,215,241 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011113,236,010 - 113,243,661 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111117,167,404 - 117,175,813 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11117,167,404 - 117,200,030 (+)Ensemblpanpan1.1panPan2
ATP5MG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1515,329,060 - 15,336,344 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha515,379,815 - 15,387,098 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0515,271,207 - 15,278,474 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl515,271,208 - 15,278,312 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1515,409,657 - 15,416,929 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0515,313,394 - 15,320,670 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0515,354,006 - 15,361,292 (-)NCBIUU_Cfam_GSD_1.0
Atp5mg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947100,531,841 - 100,539,716 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365423,453,287 - 3,461,125 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP5MG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl945,706,534 - 45,717,036 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1945,706,449 - 45,716,541 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2950,747,581 - 50,757,679 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ATP5MG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11109,779,020 - 109,789,097 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604316,248,046 - 16,256,735 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Atp5mg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478413,794,685 - 13,802,056 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478413,794,610 - 13,802,056 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Atp5mg
31 total Variants

Predicted Target Of
Summary Value
Count of predictions:37
Count of miRNA genes:34
Interacting mature miRNAs:37
Transcripts:ENSRNOT00000050878
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 64 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83085640475856404Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)84186687686866876Rat
11556286Cm81Cardiac mass QTL 810.01heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)83084815461290444Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84269268490165460Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83173772976737729Rat
1354627Despr14Despair related QTL 140.0056locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)8768895552688955Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83558203280582032Rat

1 to 10 of 64 rows
RH143634  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2845,226,787 - 45,226,914 (+)MAPPERmRatBN7.2
Rnor_6.0849,220,479 - 49,220,605NCBIRnor6.0
Rnor_5.0847,838,632 - 47,838,758UniSTSRnor5.0
RGSC_v3.4847,870,030 - 47,870,156UniSTSRGSC3.4
Celera844,811,577 - 44,811,703UniSTS
RH 3.4 Map8452.1UniSTS
Cytogenetic Map8q22UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 21 of 21 rows
RefSeq Transcripts NM_212516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC136866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 21 of 21 rows

Ensembl Acc Id: ENSRNOT00000050878   ⟹   ENSRNOP00000040969
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl845,225,686 - 45,233,559 (-)Ensembl
Rnor_6.0 Ensembl849,220,443 - 49,227,273 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112312   ⟹   ENSRNOP00000088483
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl845,225,686 - 45,230,491 (-)Ensembl
RefSeq Acc Id: NM_212516   ⟹   NP_997681
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8854,122,457 - 54,130,407 (-)NCBI
mRatBN7.2845,225,680 - 45,233,630 (-)NCBI
Rnor_6.0849,220,441 - 49,227,273 (-)NCBI
Rnor_5.0847,838,594 - 47,845,425 (-)NCBI
RGSC_v3.4847,869,992 - 47,876,824 (-)RGD
Celera844,811,539 - 44,818,403 (-)RGD
Sequence:
Protein RefSeqs NP_997681 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH58497 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000040969.2
  ENSRNOP00000088483.1
GenBank Protein Q6PDU7 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_997681   ⟸   NM_212516
- UniProtKB: Q6PDU7 (UniProtKB/Swiss-Prot),   G3V9A9 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000040969   ⟸   ENSRNOT00000050878
Ensembl Acc Id: ENSRNOP00000088483   ⟸   ENSRNOT00000112312

Name Modeler Protein Id AA Range Protein Structure
AF-Q6PDU7-F1-model_v2 AlphaFold Q6PDU7 1-103 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13695905
Promoter ID:EPDNEW_R6429
Type:initiation region
Name:Atp5mg_1
Description:ATP synthase membrane subunit g
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0849,227,303 - 49,227,363EPDNEW


1 to 22 of 22 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-30693 BioCyc
BioCyc Pathway PWY-7980 [ATP biosynthesis] BioCyc
BioCyc Pathway Image PWY-7980 BioCyc
Ensembl Genes ENSRNOG00000028884 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000050878.5 UniProtKB/Swiss-Prot
  ENSRNOT00000112312.1 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:6918545 IMAGE-MGC_LOAD
InterPro ATP_synth_F0_gsu_mt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATP_synth_su_G_mt_met UniProtKB/Swiss-Prot
KEGG Report rno:300677 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72942 IMAGE-MGC_LOAD
NCBI Gene 300677 ENTREZGENE
PANTHER PTHR12386 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ATP-synt_G UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Atp5mg PhenoGen
PIRSF ATP-synth_g_mitoch_animal UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000028884 RatGTEx
UniProt A0A8I6A6M0_RAT UniProtKB/TrEMBL
  ATP5L_RAT UniProtKB/Swiss-Prot
  G3V9A9 ENTREZGENE
  Q6PDU7 ENTREZGENE
UniProt Secondary G3V9A9 UniProtKB/Swiss-Prot
1 to 22 of 22 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-26 Atp5mg  ATP synthase membrane subunit G  Atp5mg  ATP synthase membrane subunit g  Name changed 629549 APPROVED
2017-12-01 Atp5mg  ATP synthase membrane subunit g  Atp5l  ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2011-12-01 Atp5l  ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G  Atp5l  ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-25 Atp5l  ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G  MGC72942  similar to CG6105-PA  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-09-30 MGC72942        Symbol and Name status set to provisional 70820 PROVISIONAL