Tnnt1 (troponin T1, slow skeletal type)

Advanced Search (OLGA)

Gene: Tnnt1 (troponin T1, slow skeletal type) Chinchilla lanigera

Analyze

Symbol:

Tnnt1

Name:

troponin T1, slow skeletal type

RGD ID:

9067309

Description:

ENCODES a protein that exhibits tropomyosin binding (ortholog); troponin T binding (ortholog); INVOLVED IN negative regulation of muscle contraction (ortholog); skeletal muscle contraction (ortholog); slow-twitch skeletal muscle fiber contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); dilated cardiomyopathy 2A (ortholog); FOUND IN troponin complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

troponin T type 1 (skeletal, slow); troponin T, slow skeletal muscle

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955567	1,043,026 - 1,055,039 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955567	1,039,625 - 1,050,581 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cardiomyopathy (ISO)

dilated cardiomyopathy (ISO)

dilated cardiomyopathy 2A (ISO)

familial hypertrophic cardiomyopathy (ISO)

genetic disease (ISO)

hypertrophic cardiomyopathy (ISO)

hypertrophic cardiomyopathy 7 (ISO)

myopathy (ISO)

nemaline myopathy (ISO)

nemaline myopathy 5A (ISO)

nemaline myopathy 5B (ISO)

nemaline myopathy 5C (ISO)

primary ciliary dyskinesia (ISO)

restrictive cardiomyopathy (ISO)

restrictive cardiomyopathy 1 (ISO)

Wolff-Parkinson-White syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of muscle contraction (ISO)

skeletal muscle contraction (ISO)

slow-twitch skeletal muscle fiber contraction (ISO)

transition between fast and slow fiber (ISO)

Cellular Component

troponin complex (ISO)

Molecular Function

protein binding (ISO)

tropomyosin binding (ISO)

troponin T binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

acebutolol pharmacodynamics pathway (ISO)

adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway (ISO)

amiodarone pharmacodynamics pathway (ISO)

amlodipine pharmacodynamics pathway (ISO)

atenolol pharmacodynamics pathway (ISO)

betaxolol pharmacodynamics pathway (ISO)

bisoprolol pharmacodynamics pathway (ISO)

bupranolol drug pathway (ISO)

bupranolol pharmacodynamics pathway (ISO)

carvedilol pharmacodynamics pathway (ISO)

diltiazem pharmacodynamics pathway (ISO)

disopyramide pharmacodynamics pathway (ISO)

dobutamine pharmacodynamics pathway (ISO)

esmolol pharmacodynamics pathway (ISO)

flecainde pharmacodynamics pathway (ISO)

fosphenytoin pharmacodynamics pathway (ISO)

ibutilide pharmacodynamics pathway (ISO)

isoprenaline pharmacodynamics pathway (ISO)

isradipine pharmacodynamics pathway (ISO)

levobunolol pharmacodynamics pathway (ISO)

lidocaine pharmacodynamics pathway (ISO)

metoprolol pharmacodynamics pathway (ISO)

mexiletine pharmacodynamics pathway (ISO)

nadolol pharmacodynamics pathway (ISO)

nebivolol pharmacodynamics pathway (ISO)

nifedipine pharmacodynamics pathway (ISO)

nimodipine pharmacodynamics pathway (ISO)

nisoldipine pharmacodynamics pathway (ISO)

nitrendipine pharmacodynamics pathway (ISO)

penbutolol pharmacodynamics pathway (ISO)

phenytoin pharmacodynamics pathway (ISO)

pindolol pharmacodynamics pathway (ISO)

procainamide pharmacodynamics pathway (ISO)

propranolol pharmacodynamics pathway (ISO)

quinidine pharmacodynamics pathway (ISO)

sotalol pharmacodynamics pathway (ISO)

timolol pharmacodynamics pathway (ISO)

verapamil pharmacodynamics pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Tnnt1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955567	1,043,026 - 1,055,039 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955567	1,039,625 - 1,050,581 (+)	NCBI	ChiLan1.0	ChiLan1.0

TNNT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	55,132,698 - 55,149,206 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	55,132,698 - 55,149,206 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	55,644,066 - 55,660,574 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	60,336,009 - 60,352,386 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	60,336,008 - 60,352,386	NCBI
Celera	19	52,683,099 - 52,701,800 (-)	NCBI		Celera
Cytogenetic Map	19	q13.42	NCBI
HuRef	19	51,967,104 - 51,981,532 (-)	NCBI		HuRef
CHM1_1	19	55,637,767 - 55,654,167 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	58,226,372 - 58,243,170 (-)	NCBI		T2T-CHM13v2.0

Tnnt1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	4,507,568 - 4,518,974 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	4,507,569 - 4,519,381 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	4,504,569 - 4,515,975 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	4,504,570 - 4,516,382 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	4,456,265 - 4,467,577 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	4,107,750 - 4,119,062 (-)	NCBI		MGSCv36	mm8
Celera	7	4,249,175 - 4,260,487 (-)	NCBI		Celera
Cytogenetic Map	7	A1	NCBI
cM Map	7	2.6	NCBI

Tnnt1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	78,349,035 - 78,359,394 (+)	NCBI		GRCr8
mRatBN7.2	1	69,306,362 - 69,316,721 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	69,306,362 - 69,316,721 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	74,665,281 - 74,675,640 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	83,229,594 - 83,239,953 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	76,379,084 - 76,389,599 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	72,889,270 - 72,899,629 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	72,889,270 - 72,899,659 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	75,652,123 - 75,662,339 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	68,036,411 - 68,045,142 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	68,114,521 - 68,123,253 (+)	NCBI
Celera	1	67,811,420 - 67,821,558 (-)	NCBI		Celera
Cytogenetic Map	1	q12	NCBI

TNNT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	61,268,613 - 61,282,914 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	62,997,739 - 63,012,038 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	52,173,523 - 52,190,577 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	60,868,241 - 60,885,197 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	60,868,330 - 60,882,005 (-)	Ensembl	panpan1.1		panPan2

TNNT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	102,479,617 - 102,490,776 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	102,366,801 - 102,491,147 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	102,536,670 - 102,547,827 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	103,133,191 - 103,144,315 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	102,973,590 - 103,144,307 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	102,770,115 - 102,781,270 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	102,481,708 - 102,492,858 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	103,245,737 - 103,256,895 (+)	NCBI		UU_Cfam_GSD_1.0

Tnnt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	2,124,674 - 2,133,897 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936886	425,438 - 435,500 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936886	425,331 - 434,546 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TNNT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	59,347,582 - 59,365,284 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	59,351,445 - 59,365,584 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	54,300,086 - 54,314,541 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TNNT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	47,726,049 - 47,743,465 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	47,726,002 - 47,743,404 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	282,217 - 298,212 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tnnt1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	2,094,903 - 2,100,560 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624832	2,093,852 - 2,100,647 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005413353	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005413354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013509279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013509280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01074455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01074456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000000944 ⟹ ENSCLAP00000000907

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955567	1,043,026 - 1,055,039 (+)	Ensembl

Ensembl Acc Id:

ENSCLAT00000000945 ⟹ ENSCLAP00000000908

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955567	1,044,283 - 1,050,487 (+)	Ensembl

Ensembl Acc Id:

ENSCLAT00000000946 ⟹ ENSCLAP00000000909

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955567	1,045,147 - 1,050,487 (+)	Ensembl

RefSeq Acc Id:

XM_005413353 ⟹ XP_005413410

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955567	1,043,320 - 1,050,581 (+)	NCBI

Sequence:

show sequence

CGCAGCGCCCCGGGGCCAGACAGACTTCCCTCCCGCTCTGAAGACCCAGCCCTAGGTCCCAGCA
GGATGTCGGACACCGAGGAGCAGGAATATGAGGAGCAGGCTGAAGAGGAGGAGCCCGCCGAGGA
GGAGGAGGAAGCCCCGGAGGAGCCGGAGCCGGAGGCAGAGCGAGAAGAGGAGCGCCCCAAACCG
AGCCGTCCGGTGGTGCCTCCCTTGATCCCGCCCAAGATCCCGGAAGGGGAGCGCGTGGACTTCG
ATGACATCCACCGGAAGCGCATGGAGAAGGACCTCCTGGAGCTGCAGACACTCATCGACGTGCA
CTTCGAGCAGCGCAAGAAGGAGGAGGAAGAGCTGGTGGCGCTGAAGGATCGCATCGAGCGGCGC
CGGGCGGAGAGGGCTGAGCAGCAGCGCTTCAGGACCGAGAAGGAGCGTGAGCGGCAGGCCAAGC
TGGCGGAGGAGAAGATGCGGAAGGAGGAGGAGGAGGCCAAGAAGCGCGCGGAGGATGACGCCAA
GAAGAAGAAGGTGCTGTCCAACATGGGGGCCCACTTCGGGGGTTACCTGGTCAAGGCGGAGCAG
AAGCGGGGCAAGCGGCAGACCGGGCGGGAGACGAAGCTGCGGATCCTTTCGGAGCGGAAGAAGC
CGCTGAACATCGACCACATGGGGGAGGAGCAGCTCAGGGAGAAGGCCCAGGAGCTGTCAGACTG
GATCCACCAGCTGGAGTCTGAGAAGTTTGACCTGATGGCGAAGCTGAAGCAGCAGAAATATGAG
ATCAACGTTCTGTACAACCGCATCAGCCACGCGCAGAAGTTCCGGAAAGGCGCAGGAAAGGGCC
GCGTTGGAGGCCGCTGGAAGTGAGGAAGCCAGGACGTGACCCCCTGGGGGACCCCGGGAGCTGG
CAGAGAGTTTGTCTCATCTGTAGCTTGAAATAAATGTCCCCTGGAGCACCTGC

hide sequence

RefSeq Acc Id:

XM_005413354 ⟹ XP_005413411

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955567	1,043,338 - 1,050,581 (+)	NCBI

Sequence:

show sequence

GACAGACTTCCCTCCCGCTCTGAAGACCCAGCCCTAGGTCCCAGCAGGATGTCGGACACCGAGG
AGCAGGAATATGAGGAGCAGGCTGAAGAAGAGGAGCGCCCCAAACCGAGCCGTCCGGTGGTGCC
TCCCTTGATCCCGCCCAAGATCCCGGAAGGGGAGCGCGTGGACTTCGATGACATCCACCGGAAG
CGCATGGAGAAGGACCTCCTGGAGCTGCAGACACTCATCGACGTGCACTTCGAGCAGCGCAAGA
AGGAGGAGGAAGAGCTGGTGGCGCTGAAGGATCGCATCGAGCGGCGCCGGGCGGAGAGGGCTGA
GCAGCAGCGCTTCAGGACCGAGAAGGAGCGTGAGCGGCAGGCCAAGCTGGCGGAGGAGAAGATG
CGGAAGGAGGAGGAGGAGGCCAAGAAGCGCGCGGAGGATGACGCCAAGAAGAAGAAGGTGCTGT
CCAACATGGGGGCCCACTTCGGGGGTTACCTGGTCAAGGCGGAGCAGAAGCGGGGCAAGCGGCA
GACCGGGCGGGAGACGAAGCTGCGGATCCTTTCGGAGCGGAAGAAGCCGCTGAACATCGACCAC
ATGGGGGAGGAGCAGCTCAGGGAGAAGGCCCAGGAGCTGTCAGACTGGATCCACCAGCTGGAGT
CTGAGAAGTTTGACCTGATGGCGAAGCTGAAGCAGCAGAAATATGAGATCAACGTTCTGTACAA
CCGCATCAGCCACGCGCAGAAGTTCCGGAAAGGCGCAGGAAAGGGCCGCGTTGGAGGCCGCTGG
AAGTGAGGAAGCCAGGACGTGACCCCCTGGGGGACCCCGGGAGCTGGCAGAGAGTTTGTCTCAT
CTGTAGCTTGAAATAAATGTCCCCTGGAGCACCTGC

hide sequence

RefSeq Acc Id:

XM_013509279 ⟹ XP_013364733

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955567	1,043,320 - 1,050,581 (+)	NCBI

Sequence:

show sequence

CGCAGCGCCCCGGGGCCAGACAGACTTCCCTCCCGCTCTGAAGACCCAGCCCTAGGTCCCAGCA
GGATGTCGGACACCGAGGAGCAGGAATATGAGGAGCAGGCTGAAGAGGAGGAGCCCGCCGAGGA
GGAGGAGGAAGAAGAGGAGCGCCCCAAACCGAGCCGTCCGGTGGTGCCTCCCTTGATCCCGCCC
AAGATCCCGGAAGGGGAGCGCGTGGACTTCGATGACATCCACCGGAAGCGCATGGAGAAGGACC
TCCTGGAGCTGCAGACACTCATCGACGTGCACTTCGAGCAGCGCAAGAAGGAGGAGGAAGAGCT
GGTGGCGCTGAAGGATCGCATCGAGCGGCGCCGGGCGGAGAGGGCTGAGCAGCAGCGCTTCAGG
ACCGAGAAGGAGCGTGAGCGGCAGGCCAAGCTGGCGGAGGAGAAGATGCGGAAGGAGGAGGAGG
AGGCCAAGAAGCGCGCGGAGGATGACGCCAAGAAGAAGAAGGTGCTGTCCAACATGGGGGCCCA
CTTCGGGGGTTACCTGGTCAAGGCGGAGCAGAAGCGGGGCAAGCGGCAGACCGGGCGGGAGACG
AAGCTGCGGATCCTTTCGGAGCGGAAGAAGCCGCTGAACATCGACCACATGGGGGAGGAGCAGC
TCAGGGAGAAGGCCCAGGAGCTGTCAGACTGGATCCACCAGCTGGAGTCTGAGAAGTTTGACCT
GATGGCGAAGCTGAAGCAGCAGAAATATGAGATCAACGTTCTGTACAACCGCATCAGCCACGCG
CAGAAGTTCCGGAAAGGCGCAGGAAAGGGCCGCGTTGGAGGCCGCTGGAAGTGAGGAAGCCAGG
ACGTGACCCCCTGGGGGACCCCGGGAGCTGGCAGAGAGTTTGTCTCATCTGTAGCTTGAAATAA
ATGTCCCCTGGAGCACCTGC

hide sequence

RefSeq Acc Id:

XM_013509280 ⟹ XP_013364734

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955567	1,039,625 - 1,050,581 (+)	NCBI

Sequence:

show sequence

GGCCCTGCTGGGAACCCGGGCCAAGGAGACCTTGGACCTACGGGCCCACCTCAAGCAGGTGAAG
AAGGAGGACACCGAGAAGGTCCCAGCAGGATGTCGGACACCGAGGAGCAGGAATATGAGGAGCA
GGCTGAAGAGGAGGAGCCCGCCGAGGAGGAGGAGGAAGCCCCGGAGGAGCCGGAGCCGGAGGCA
GAGCGAGAAGAGGAGCGCCCCAAACCGAGCCGTCCGGTGGTGCCTCCCTTGATCCCGCCCAAGA
TCCCGGAAGGGGAGCGCGTGGACTTCGATGACATCCACCGGAAGCGCATGGAGAAGGACCTCCT
GGAGCTGCAGACACTCATCGACGTGCACTTCGAGCAGCGCAAGAAGGAGGAGGAAGAGCTGGTG
GCGCTGAAGGATCGCATCGAGCGGCGCCGGGCGGAGAGGGCTGAGCAGCAGCGCTTCAGGACCG
AGAAGGAGCGTGAGCGGCAGGCCAAGCTGGCGGAGGAGAAGATGCGGAAGGAGGAGGAGGAGGC
CAAGAAGCGCGCGGAGGATGACGCCAAGAAGAAGAAGGTGCTGTCCAACATGGGGGCCCACTTC
GGGGGTTACCTGGTCAAGGCGGAGCAGAAGCGGGGCAAGCGGCAGACCGGGCGGGAGACGAAGC
TGCGGATCCTTTCGGAGCGGAAGAAGCCGCTGAACATCGACCACATGGGGGAGGAGCAGCTCAG
GGAGAAGGCCCAGGAGCTGTCAGACTGGATCCACCAGCTGGAGTCTGAGAAGTTTGACCTGATG
GCGAAGCTGAAGCAGCAGAAATATGAGATCAACGTTCTGTACAACCGCATCAGCCACGCGCAGA
AGTTCCGGAAAGGCGCAGGAAAGGGCCGCGTTGGAGGCCGCTGGAAGTGAGGAAGCCAGGACGT
GACCCCCTGGGGGACCCCGGGAGCTGGCAGAGAGTTTGTCTCATCTGTAGCTTGAAATAAATGT
CCCCTGGAGCACCTGC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005413410	(Get FASTA)	NCBI Sequence Viewer
	XP_005413411	(Get FASTA)	NCBI Sequence Viewer
	XP_013364733	(Get FASTA)	NCBI Sequence Viewer
	XP_013364734	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000000907
	ENSCLAP00000000907.1
	ENSCLAP00000000908
	ENSCLAP00000000908.1
	ENSCLAP00000000909.1

RefSeq Acc Id:	XP_005413410 ⟸ XM_005413353
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UJD8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDTEEQEYEEQAEEEEPAEEEEEAPEEPEPEAEREEERPKPSRPVVPPLIPPKIPEGERVDFD DIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKDRIERRRAERAEQQRFRTEKERERQAKL AEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRETKLRILSERKKP LNIDHMGEEQLREKAQELSDWIHQLESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGR VGGRWK hide sequence

RefSeq Acc Id:	XP_005413411 ⟸ XM_005413354
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2UJD8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDTEEQEYEEQAEEEERPKPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEKDLLELQTLIDVH FEQRKKEEEELVALKDRIERRRAERAEQQRFRTEKERERQAKLAEEKMRKEEEEAKKRAEDDAK KKKVLSNMGAHFGGYLVKAEQKRGKRQTGRETKLRILSERKKPLNIDHMGEEQLREKAQELSDW IHQLESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK hide sequence

RefSeq Acc Id:	XP_013364734 ⟸ XM_013509280
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UJD8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDTEEQEYEEQAEEEEPAEEEEEAPEEPEPEAEREEERPKPSRPVVPPLIPPKIPEGERVDFD DIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKDRIERRRAERAEQQRFRTEKERERQAKL AEEKMRKEEEEAKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRETKLRILSERKKP LNIDHMGEEQLREKAQELSDWIHQLESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGR VGGRWK hide sequence

RefSeq Acc Id:	XP_013364733 ⟸ XM_013509279
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UH84 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDTEEQEYEEQAEEEEPAEEEEEEEERPKPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEKDL LELQTLIDVHFEQRKKEEEELVALKDRIERRRAERAEQQRFRTEKERERQAKLAEEKMRKEEEE AKKRAEDDAKKKKVLSNMGAHFGGYLVKAEQKRGKRQTGRETKLRILSERKKPLNIDHMGEEQL REKAQELSDWIHQLESEKFDLMAKLKQQKYEINVLYNRISHAQKFRKGAGKGRVGGRWK hide sequence

Ensembl Acc Id:

ENSCLAP00000000908 ⟸ ENSCLAT00000000945

Ensembl Acc Id:

ENSCLAP00000000909 ⟸ ENSCLAT00000000946

Ensembl Acc Id:

ENSCLAP00000000907 ⟸ ENSCLAT00000000944

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000000706	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000000944	ENTREZGENE
	ENSCLAT00000000944.1	UniProtKB/TrEMBL
	ENSCLAT00000000945	ENTREZGENE
	ENSCLAT00000000945.1	UniProtKB/TrEMBL
	ENSCLAT00000000946.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.350	UniProtKB/TrEMBL
InterPro	TNNT	UniProtKB/TrEMBL
	Troponin	UniProtKB/TrEMBL
	Troponin_sf	UniProtKB/TrEMBL
NCBI Gene	Tnnt1	ENTREZGENE
PANTHER	PTHR11521	UniProtKB/TrEMBL
	TROPONIN T, SLOW SKELETAL MUSCLE	UniProtKB/TrEMBL
Pfam	Troponin	UniProtKB/TrEMBL
Superfamily-SCOP	SSF90250	UniProtKB/TrEMBL
UniProt	A0A8C2UH84	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2UJD8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C2YID5_CHILA	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Tnnt1	troponin T1, slow skeletal type		troponin T type 1 (skeletal, slow)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB