Fam234b (family with sequence similarity 234 member B) - Rat Genome Database

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Gene: Fam234b (family with sequence similarity 234 member B) Chinchilla lanigera
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Symbol: Fam234b
Name: family with sequence similarity 234 member B
RGD ID: 9056715
Description: ASSOCIATED WITH autosomal dominant intellectual developmental disorder 6 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Kiaa1467; KIAA1467 ortholog; uncharacterized protein KIAA1467 homolog
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554139,899,940 - 9,932,050 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554139,899,940 - 9,932,050 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fam234bChinchillaautosomal dominant intellectual developmental disorder 6  ISOFAM234B (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disability and autosomal dominant 6ClinVarPMID:23918416 more ...


Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Fam234bChinchillaprotein binding enablesISOUniProtKB:O146789068941 PMID:28514442 and PMID:33961781IntActPMID:28514442 and PMID:33961781


#
Reference Title
Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
PMID:22301074  



Fam234b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554139,899,940 - 9,932,050 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554139,899,940 - 9,932,050 (+)NCBIChiLan1.0ChiLan1.0
FAM234B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381213,044,381 - 13,083,449 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1213,044,381 - 13,142,521 (+)EnsemblGRCh38hg38GRCh38
GRCh371213,197,315 - 13,236,383 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361213,088,582 - 13,127,650 (+)NCBINCBI36Build 36hg18NCBI36
Celera1218,346,197 - 18,385,250 (+)NCBICelera
Cytogenetic Map12p13.1NCBI
HuRef1212,967,424 - 13,006,477 (+)NCBIHuRef
CHM1_11213,162,735 - 13,201,779 (+)NCBICHM1_1
T2T-CHM13v2.01212,918,604 - 12,957,659 (+)NCBIT2T-CHM13v2.0
Fam234b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396135,173,881 - 135,213,240 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6135,174,975 - 135,221,953 (+)EnsemblGRCm39 Ensembl
GRCm386135,196,880 - 135,236,242 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6135,197,977 - 135,244,955 (+)EnsemblGRCm38mm10GRCm38
MGSCv376135,148,005 - 135,186,258 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366135,163,745 - 135,200,715 (+)NCBIMGSCv36mm8
Celera6138,152,578 - 138,190,242 (+)NCBICelera
Cytogenetic Map6G1NCBI
cM Map666.02NCBI
Fam234b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84169,779,651 - 169,854,024 (+)NCBIGRCr8
mRatBN7.24168,048,313 - 168,124,017 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4168,048,396 - 168,097,338 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4174,343,624 - 174,384,877 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04170,124,864 - 170,166,117 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04168,748,745 - 168,791,586 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04168,976,797 - 169,052,750 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4168,976,859 - 169,019,561 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04233,247,117 - 233,290,088 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44172,149,689 - 172,190,878 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14172,393,462 - 172,433,858 (+)NCBI
Celera4156,646,736 - 156,688,790 (+)NCBICelera
Cytogenetic Map4q43NCBI
FAM234B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21018,500,392 - 18,539,477 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11218,497,243 - 18,536,237 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01213,056,208 - 13,095,200 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11213,460,006 - 13,498,904 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1213,459,629 - 13,498,904 (+)Ensemblpanpan1.1panPan2
FAM234B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12733,302,816 - 33,337,751 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2733,305,231 - 33,337,577 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2713,106,966 - 13,141,792 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02733,608,740 - 33,643,565 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2733,608,760 - 33,643,524 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12733,503,101 - 33,537,903 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02733,452,414 - 33,487,215 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02712,842,210 - 12,877,023 (+)NCBIUU_Cfam_GSD_1.0
Fam234b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494594,518,537 - 94,552,880 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365874,246,004 - 4,280,817 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365874,246,172 - 4,280,506 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAM234B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl559,413,064 - 59,491,536 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1559,410,908 - 59,493,052 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2562,763,745 - 62,827,016 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FAM234B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11112,953,013 - 12,989,151 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1112,952,976 - 12,989,305 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606922,329,729 - 22,365,860 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fam234b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475224,915,436 - 24,955,879 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475224,916,838 - 24,955,567 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.






Ensembl Acc Id: ENSCLAT00000023140   ⟹   ENSCLAP00000022925
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554139,899,940 - 9,932,050 (+)Ensembl
RefSeq Acc Id: XM_005378980   ⟹   XP_005379037
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554139,899,940 - 9,932,050 (+)NCBI
Sequence:
Protein RefSeqs XP_005379037 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000022925
  ENSCLAP00000022925.1
RefSeq Acc Id: XP_005379037   ⟸   XM_005378980
- UniProtKB: A0A8C2W003 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000022925   ⟸   ENSCLAT00000023140



1 to 12 of 12 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCLAG00000015730 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000023140 ENTREZGENE
  ENSCLAT00000023140.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
InterPro FAM234 UniProtKB/TrEMBL
  Quinoprotein_ADH-like_supfam UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
NCBI Gene Kiaa1467 ENTREZGENE
PANTHER PROTEIN FAM234B UniProtKB/TrEMBL
  PTHR21419 UniProtKB/TrEMBL
Superfamily-SCOP SSF50998 UniProtKB/TrEMBL
UniProt A0A8C2W003 ENTREZGENE, UniProtKB/TrEMBL
1 to 12 of 12 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Fam234b  family with sequence similarity 234 member B  Kiaa1467  KIAA1467 ortholog  Symbol and/or name change 5135510 APPROVED