Fam234b (family with sequence similarity 234, member B) - Rat Genome Database

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Gene: Fam234b (family with sequence similarity 234, member B) Rattus norvegicus
Analyze
Symbol: Fam234b
Name: family with sequence similarity 234, member B
RGD ID: 1306151
Description: Predicted to be located in Golgi apparatus; membrane; and microtubule organizing center. Orthologous to human FAM234B (family with sequence similarity 234 member B); INTERACTS WITH bisphenol A; decabromodiphenyl ether; paracetamol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: hypothetical protein LOC362455; LOC362455; RGD1306151; similar to hypothetical protein DKFZp761D0211; uncharacterized protein KIAA1467 homolog; uncharacterized protein LOC362455
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84169,779,651 - 169,854,024 (+)NCBIGRCr8
mRatBN7.24168,048,313 - 168,124,017 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4168,048,396 - 168,097,338 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4174,343,624 - 174,384,877 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04170,124,864 - 170,166,117 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04168,748,745 - 168,791,586 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04168,976,797 - 169,052,750 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4168,976,859 - 169,019,561 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04233,247,117 - 233,290,088 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44172,149,689 - 172,190,878 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14172,393,462 - 172,433,858 (+)NCBI
Celera4156,646,736 - 156,688,790 (+)NCBICelera
Cytogenetic Map4q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:21873635  


Genomics

Comparative Map Data
Fam234b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84169,779,651 - 169,854,024 (+)NCBIGRCr8
mRatBN7.24168,048,313 - 168,124,017 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4168,048,396 - 168,097,338 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4174,343,624 - 174,384,877 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04170,124,864 - 170,166,117 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04168,748,745 - 168,791,586 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04168,976,797 - 169,052,750 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4168,976,859 - 169,019,561 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04233,247,117 - 233,290,088 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44172,149,689 - 172,190,878 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14172,393,462 - 172,433,858 (+)NCBI
Celera4156,646,736 - 156,688,790 (+)NCBICelera
Cytogenetic Map4q43NCBI
FAM234B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381213,044,381 - 13,083,449 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1213,044,381 - 13,142,521 (+)EnsemblGRCh38hg38GRCh38
GRCh371213,197,315 - 13,236,383 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361213,088,582 - 13,127,650 (+)NCBINCBI36Build 36hg18NCBI36
Celera1218,346,197 - 18,385,250 (+)NCBICelera
Cytogenetic Map12p13.1NCBI
HuRef1212,967,424 - 13,006,477 (+)NCBIHuRef
CHM1_11213,162,735 - 13,201,779 (+)NCBICHM1_1
T2T-CHM13v2.01212,918,604 - 12,957,659 (+)NCBIT2T-CHM13v2.0
Fam234b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396135,173,881 - 135,213,240 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6135,174,975 - 135,221,953 (+)EnsemblGRCm39 Ensembl
GRCm386135,196,880 - 135,236,242 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6135,197,977 - 135,244,955 (+)EnsemblGRCm38mm10GRCm38
MGSCv376135,148,005 - 135,186,258 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366135,163,745 - 135,200,715 (+)NCBIMGSCv36mm8
Celera6138,152,578 - 138,190,242 (+)NCBICelera
Cytogenetic Map6G1NCBI
cM Map666.02NCBI
Fam234b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554139,899,940 - 9,932,050 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554139,899,940 - 9,932,050 (+)NCBIChiLan1.0ChiLan1.0
FAM234B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21018,500,392 - 18,539,477 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11218,497,243 - 18,536,237 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01213,056,208 - 13,095,200 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11213,460,006 - 13,498,904 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1213,459,629 - 13,498,904 (+)Ensemblpanpan1.1panPan2
FAM234B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12733,302,816 - 33,337,751 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2733,305,231 - 33,337,577 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2713,106,966 - 13,141,792 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02733,608,740 - 33,643,565 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2733,608,760 - 33,643,524 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12733,503,101 - 33,537,903 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02733,452,414 - 33,487,215 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02712,842,210 - 12,877,023 (+)NCBIUU_Cfam_GSD_1.0
Fam234b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494594,518,537 - 94,552,880 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365874,246,004 - 4,280,817 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365874,246,172 - 4,280,506 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FAM234B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl559,413,064 - 59,491,536 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1559,410,908 - 59,493,052 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2562,763,745 - 62,827,016 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FAM234B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11112,953,013 - 12,989,151 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1112,952,976 - 12,989,305 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606922,329,729 - 22,365,860 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fam234b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475224,915,436 - 24,955,879 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475224,916,838 - 24,955,567 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fam234b
348 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:256
Count of miRNA genes:177
Interacting mature miRNAs:211
Transcripts:ENSRNOT00000068663
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
10053718Scort25Serum corticosterone level QTL 252.150.0097blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)4155561574182687754Rat
1549827Scl46Serum cholesterol level QTL 463.5blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)4132396220177396220Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4125590636170590636Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4124778595169778595Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4145568712182687754Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1300109Rf13Renal function QTL 133.91renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)4157710145182687754Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4123143783168143783Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
2303623Vencon2Ventilatory control QTL 23.8respiration trait (VT:0001943)minute ventilation (CMO:0000132)4135204660180204660Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4135699135180699135Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4146565735175236377Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4137755016181392681Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat

Markers in Region
D4Rat68  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24168,068,179 - 168,068,358 (+)MAPPERmRatBN7.2
mRatBN7.24168,068,179 - 168,069,246 (+)MAPPERmRatBN7.2
Rnor_6.04168,996,642 - 168,998,263NCBIRnor6.0
Rnor_6.04168,996,642 - 168,996,820NCBIRnor6.0
Rnor_5.04233,266,962 - 233,267,140UniSTSRnor5.0
RGSC_v3.44172,169,472 - 172,169,650UniSTSRGSC3.4
RGSC_v3.44172,169,471 - 172,169,650RGDRGSC3.4
RGSC_v3.14172,414,408 - 172,414,586RGD
Celera4156,666,511 - 156,666,677UniSTS
RH 3.4 Map41021.2UniSTS
RH 3.4 Map41021.2RGD
SHRSP x BN Map487.2799RGD
SHRSP x BN Map487.2799UniSTS
FHH x ACI Map4107.8399RGD
Cytogenetic Map4q43UniSTS
AU046710  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24168,068,177 - 168,068,360 (+)MAPPERmRatBN7.2
mRatBN7.24168,068,177 - 168,069,246 (+)MAPPERmRatBN7.2
Rnor_6.04168,996,640 - 168,998,265NCBIRnor6.0
Rnor_6.04168,996,640 - 168,996,822NCBIRnor6.0
Rnor_5.04233,266,960 - 233,267,142UniSTSRnor5.0
RGSC_v3.44172,169,470 - 172,169,652UniSTSRGSC3.4
Celera4156,666,509 - 156,666,679UniSTS
Cytogenetic Map4q43UniSTS
RH139407  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24168,089,448 - 168,089,614 (+)MAPPERmRatBN7.2
Rnor_6.04169,019,356 - 169,019,521NCBIRnor6.0
Rnor_5.04233,289,882 - 233,290,047UniSTSRnor5.0
RGSC_v3.44172,190,673 - 172,190,838UniSTSRGSC3.4
Celera4156,688,585 - 156,688,750UniSTS
RH 3.4 Map41021.1UniSTS
Cytogenetic Map4q43UniSTS
RH141826  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24168,088,154 - 168,088,357 (+)MAPPERmRatBN7.2
Rnor_6.04169,018,062 - 169,018,264NCBIRnor6.0
Rnor_5.04233,288,588 - 233,288,790UniSTSRnor5.0
RGSC_v3.44172,189,379 - 172,189,581UniSTSRGSC3.4
Celera4156,687,291 - 156,687,493UniSTS
RH 3.4 Map41024.3UniSTS
Cytogenetic Map4q43UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000068663   ⟹   ENSRNOP00000063612
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4168,048,396 - 168,089,654 (+)Ensembl
Rnor_6.0 Ensembl4168,976,859 - 169,019,561 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000100976   ⟹   ENSRNOP00000092666
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4168,060,256 - 168,086,924 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000114246   ⟹   ENSRNOP00000077658
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4168,048,735 - 168,089,654 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000116621   ⟹   ENSRNOP00000097300
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4168,048,396 - 168,097,338 (+)Ensembl
RefSeq Acc Id: NM_001108652   ⟹   NP_001102122
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84169,779,737 - 169,820,992 (+)NCBI
mRatBN7.24168,048,396 - 168,089,654 (+)NCBI
Rnor_6.04168,976,859 - 169,019,561 (+)NCBI
Rnor_5.04233,247,117 - 233,290,088 (+)NCBI
RGSC_v3.44172,149,689 - 172,190,878 (+)RGD
Celera4156,646,736 - 156,688,790 (+)RGD
Sequence:
RefSeq Acc Id: XM_039107909   ⟹   XP_038963837
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84169,780,026 - 169,854,024 (+)NCBI
mRatBN7.24168,048,689 - 168,124,017 (+)NCBI
RefSeq Acc Id: XM_039107910   ⟹   XP_038963838
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84169,780,031 - 169,854,024 (+)NCBI
mRatBN7.24168,048,691 - 168,124,015 (+)NCBI
RefSeq Acc Id: XM_039107911   ⟹   XP_038963839
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84169,780,031 - 169,820,993 (+)NCBI
mRatBN7.24168,048,692 - 168,089,655 (+)NCBI
RefSeq Acc Id: XM_039107912   ⟹   XP_038963840
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84169,779,651 - 169,854,024 (+)NCBI
mRatBN7.24168,048,313 - 168,124,017 (+)NCBI
RefSeq Acc Id: XM_039107913   ⟹   XP_038963841
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84169,779,651 - 169,854,024 (+)NCBI
mRatBN7.24168,048,313 - 168,124,015 (+)NCBI
RefSeq Acc Id: XM_063286371   ⟹   XP_063142441
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84169,779,805 - 169,820,993 (+)NCBI
RefSeq Acc Id: XM_063286372   ⟹   XP_063142442
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84169,779,651 - 169,820,993 (+)NCBI
RefSeq Acc Id: NP_001102122   ⟸   NM_001108652
- UniProtKB: D3ZWJ9 (UniProtKB/TrEMBL),   A0A8I6AHZ5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000063612   ⟸   ENSRNOT00000068663
RefSeq Acc Id: XP_038963840   ⟸   XM_039107912
- Peptide Label: isoform X5
- UniProtKB: A0A8I6AHZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038963841   ⟸   XM_039107913
- Peptide Label: isoform X6
- UniProtKB: A0A8I6AHZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038963837   ⟸   XM_039107909
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AHZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038963838   ⟸   XM_039107910
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AHZ5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038963839   ⟸   XM_039107911
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AHZ5 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000092666   ⟸   ENSRNOT00000100976
Ensembl Acc Id: ENSRNOP00000077658   ⟸   ENSRNOT00000114246
Ensembl Acc Id: ENSRNOP00000097300   ⟸   ENSRNOT00000116621
RefSeq Acc Id: XP_063142442   ⟸   XM_063286372
- Peptide Label: isoform X7
- UniProtKB: A0A8I6AHZ5 (UniProtKB/TrEMBL),   A0A8L2QV23 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063142441   ⟸   XM_063286371
- Peptide Label: isoform X4
- UniProtKB: A0A8I6AHZ5 (UniProtKB/TrEMBL),   A0A8I5ZKC6 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZWJ9-F1-model_v2 AlphaFold D3ZWJ9 1-624 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693458
Promoter ID:EPDNEW_R3983
Type:multiple initiation site
Name:Fam234b_1
Description:family with sequence similarity 234, member B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.04168,976,870 - 168,976,930EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306151 AgrOrtholog
BioCyc Gene G2FUF-42631 BioCyc
Ensembl Genes ENSRNOG00000008443 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000068663.2 UniProtKB/TrEMBL
  ENSRNOT00000100976.1 UniProtKB/TrEMBL
  ENSRNOT00000114246.1 UniProtKB/TrEMBL
  ENSRNOT00000116621.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FAM234 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Quinoprotein_ADH-like_supfam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:362455 UniProtKB/Swiss-Prot
NCBI Gene 362455 ENTREZGENE
PANTHER PROTEIN FAM234B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR21419 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB KIAA1467 RGD
PhenoGen Fam234b PhenoGen
RatGTEx ENSRNOG00000008443 RatGTEx
Superfamily-SCOP SSF50998 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5ZKC6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AHZ5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6ASE9_RAT UniProtKB/TrEMBL
  A0A8L2QV23 ENTREZGENE, UniProtKB/TrEMBL
  D3ZWJ9 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-27 Fam234b  family with sequence similarity 234, member B  RGD1306151  similar to hypothetical protein DKFZp761D0211  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1306151  similar to hypothetical protein DKFZp761D0211   RGD1306151_predicted  similar to hypothetical protein DKFZp761D0211 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-20 RGD1306151_predicted  similar to hypothetical protein DKFZp761D0211 (predicted)  LOC362455_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC362455_predicted  similar to hypothetical protein DKFZp761D0211 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL