| Gene: Galnt8 (polypeptide N-acetylgalactosaminyltransferase 8) Chinchilla lanigera |
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Analyze |
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| Symbol: |
Galnt8 |
| Name: |
polypeptide N-acetylgalactosaminyltransferase 8 |
| RGD ID: |
9022097 |
| Description: |
ASSOCIATED WITH episodic ataxia type 1 (ortholog); genetic disease (ortholog); Hyperphosphatemic Familial Tumoral Calcinosis 1 (ortholog) |
| Type: |
protein-coding
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| RefSeq Status: |
MODEL |
| Previously known as: |
probable polypeptide N-acetylgalactosaminyltransferase 8; UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8) |
| RGD Orthologs |
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| Alliance Genes |
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| More Info |
more info ...
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| More Info |
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| Latest Assembly: |
ChiLan1.0 - Chinchilla ChiLan1.0 Assembly |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 | NW_004955413 | 2,510,123 - 2,566,842 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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Imported Disease Annotations - ClinVar
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References
Additional References at PubMed
Genomics
Comparative Map Data
Galnt8
(Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955413 | 2,510,123 - 2,566,842 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GALNT8
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 4,720,400 - 4,772,726 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 4,720,400 - 4,851,927 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 4,829,566 - 4,881,892 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 4,700,013 - 4,752,153 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 4,700,012 - 4,752,153 | NCBI | | | | | Celera | 12 | 6,451,758 - 6,503,719 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | p13.32 | NCBI | | | | | HuRef | 12 | 4,686,593 - 4,738,667 (+) | NCBI | | HuRef | | | CHM1_1 | 12 | 4,829,349 - 4,881,469 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 4,727,222 - 4,779,711 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Gm29788
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 126,769,412 - 126,787,607 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 126,769,412 - 126,787,607 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 126,792,449 - 126,810,644 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 126,792,449 - 126,810,644 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | Celera | 6 | 128,465,015 - 128,488,274 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | F3 | NCBI | | | | |
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Galnt8
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 161,307,603 - 161,336,485 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 159,626,438 - 159,650,327 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | Rnor_6.0 | 4 | 159,340,750 - 159,362,350 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Celera | 4 | 148,344,913 - 148,366,518 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q42 | NCBI | | | | |
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GALNT8
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 10,261,833 - 10,399,454 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 10,258,570 - 10,328,383 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 4,837,719 - 4,894,120 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 4,758,570 - 4,813,253 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 4,758,570 - 4,810,085 (+) | Ensembl | panpan1.1 | | panPan2 | |
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GALNT8
(Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 27 | 40,077,724 - 40,138,592 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 6,543,861 - 6,678,425 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 40,359,000 - 40,493,551 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 40,437,538 - 40,493,491 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 40,248,030 - 40,382,466 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 40,273,137 - 40,407,572 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 5,954,467 - 6,089,147 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Galnt8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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GALNT8
(Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 5 | 65,696,868 - 65,735,536 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 65,697,120 - 65,735,521 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 67,903,081 - 67,941,329 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GALNT8
(Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 4,753,079 - 4,819,580 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 4,753,234 - 4,816,693 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666063 | 3,430,165 - 3,493,584 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Galnt8
(Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
| RefSeq Acc Id: |
XM_005379606 ⟹ XP_005379663 |
| Type: |
CODING |
| Position: |
| Chinchilla Assembly | Chr | Position (strand) | Source |
|---|
ChiLan1.0 | NW_004955413 | 2,510,123 - 2,566,842 (+) | NCBI |
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| Sequence: |
GGACAGCTGCTCCTCAACTGGCAGGGCGGTGTGGTGCTCAACTGTGGAGGAGCTACAGGTGGAG
ATGCTCAGGAGAAGCCTCCCCCAAGTCCTCTGCCTCGGGCTGATTCTGGTCCTTGCTGCCAATC
TCCTCCTGGTGTTTCACACCAAAGAGACTGTGCAGAACTTGATTCGGGATGGTCTTCACAAGGA
GACCCATCGGCCTCCATCTGAGAGGGACGAGACTATGATGAACAGGCTGTCCCACCTGGAGGTG
GCTGTGCAGCAGCTGAAAGAAAATATGAAATTGGCTATGAAGCAACAAGCAAATGTGGGAGACA
CACTAATGAGGGTGGAAGATGAAATTCACCTTGCCCCAAAGGCAGTGCAAGGCAACGTGGTCAA
GACAAACAAGCCCCAACCGCCAAAGAAACTCTTCTCAACCTCTGCGCTATTCCGGCAGTGGGGT
GAGGGTCTTGCTGAGGCTGAGCAGAGAAAGGCTCAGGACCTGTTCCAAAGATTTGGCTACAATG
TGTACCTCAGCAACCAGCTGCCCCTCAACCGCAGCATCCCTGACACGCGGGATTCAAGGTGTCT
TCAGAAGACATACCCTGCGCAGCTCCCATCTCTCAGTGTGATCCTCATATTCGTGGACGAAGCT
CTGTCCGTTATACAGCGGGCCATCACCAGCGTCATTAACCGGACTCCTCCACAGGTGTTGAAGG
AAATTATTTTGGTGGATGATTTTAGCTCAAATGGAGAACTAAAGGTACCCTTGGATGAAAAGAT
CGAGTTTTACAATAAGATGTATCCTGGACTACTGAAAATAATACGGCATGCTAAGAGAAAAGGC
CTTGCTCATGCACGAAACACAGGCTGGGAAGCCGCCAGGGCCGATGTGGTCGTCATCTTGGATG
CTCATGTGGAAGTAAACGTTGGCTGGGCAGAGCCCATCTTGGCCCGGATTCAAGAAGACCGCAC
TGTGATTATATCTCCTGTGTTTGACAACATTTGTTTTGATACCTTCAAACTGTTGAAGTATGAA
CTGGCAGTGGATGGGTTTAACTGGGAACTGTGGTGCCGCTATGACCCAGTGCCACAAACCTGGA
TTGCTCTGGATGATGTCACTGCCCCAGTGAGGAGCCCCTCCATCATGGGCATCTTGGCTGCCAA
TAGGCTCTTCCTGGGAGAGATTGGAGCCCTGGATGATGGGATGCTGGTCTATGGAGGAGAGAAC
GTGGAGCTTAGCTTGAGGGTATGGCAGTGTGGAGGGAAGATCGAGGTCTTACCCTGCTCCCGAG
TAGGTCATCTGGAGCGACACCACAAGCCCTACGCCTTGGATCTAAGTCTTTCCTTAAAGCGCAA
TGCCTTGCGTGTGGCCGAGACCTGGATGGATGAGTATAAATACATGGTCTACCTGGCCTGGAAC
TTACCACTTCAGAACTCTGGGATTGATTATGGAGACATCTCTTCCAAAAGGGTACTCCGGGAGA
ACCTGAAATGTAAAACGTTTGACTGGTACCTGAAAAATGTTTATCCAGCGCTGAAGCCTATCCT
TAATATTGTGGGCTATGGAAGAATGAAAAATTCCTTGGATAAAGGTGTCTGCCTGGATCGCGGA
CCTGTTCCGGGCAATACCCCCATCATGTATGCATGCCATGAGTTCAGTTCACAGAATGTCTACT
ACCTCCTGACTGGGGAGTTCTATGTAGGACCACTGGTTGCAGAGGTTCTCAGGGATGACCTTTG
CCTGACCGACCCAGGGCACAGGGAGAAGCCTACTTTGGAGAAGTGTTCTAACGCAGCCCAGAAT
AAACTGCACATATATTGGGATTTTAAGCAGGGAGGCGCTGTCATCAACAGGGACACACAGAGGT
GCCTGGAGATTAGGAGGGAGCCCTCTGGTGCCTACGGGCTTGTGCTGCAGACCTGCATGGCGCA
AGTGTGGGAAATACAGTACACCTTTGGAGCCTGGGGCCAGACCAATGCACTGTGAGCTTGGTGC
AATCTGGGTGTGGGACACTGGTTTTTGCAGCTGGAATGGCTCCTACCCCAGCACTTCTCCAAGT
GGAGAGGGTGTAGGGTGGAAGGTGAGTGTATGTGTTCACTGTCATGTTCAGCAGGCCATGCAGT
GGACAGGAAGCCCAGCATGTGTCAAGCCGTCTGTTCTGCCGTGGTAAGGAGCTTCCCCTGATGC
ATCTTCCTCACTTCCTTTGAAAGATCACGATATGTATCAATGTCATTCTTAGAAAGTCCTTGAA
ATATTCAGCATCATCTGCCAGTTCTGTGCGAAAGCATGAAGATGGAAGTTTATCTTTGATTTCT
GCCAACTCTGTATAGCCTTCTTTCATGACAGCTACTGTGGTCACCTCTCCCAAACCTCCTTCCT
GGCTCCTGCTTGGAGATGCCCCAGACTGCAAGGCTGCTCTTCATGACAGGAAGCATGCTCCTCA
TGCCTGCAGCAGTGTAGCTCCTCAGGGCCACCAACTCCTCCTCCTTTTGGACTGTTCAGAGAAA
ACAGCAAAAGACAAGTAGCTCTAACAGGTTCCTCCTTCCATGCCCCACAGCAGTTCTGTTTTGA
TGATCAATTTCTCCCATACCAGATATGCTGAAGAGGAGAGGTAGTACCTCATTTAATCTCAGCT
TTGCAAGAATGGTGCAATGAATGGCAGAAAAATCTAGGTCTTTCTGACTTCCTCTAAGTAGGCT
GTAACAGTTAATGACTTGATTTCATCTATTTCCCCCTACTATCCATGAACATTATGGGCAAAAT
GTGAGCCATCTCTTACCAAGGTACAAAAGAAGGGCTCCAGATGAAAATTAATCTCATGGCTGTT
CATAATTAATCTCAGGAATCTCATGGCTATTTACTTGATAAACCCTCCTCTGTCCCCAGTTGGT
CAGTTAAGAAATGTTCAGAGCTGCCAATATTTGGTGCTGTTTTGGAGGCTGGCAGAGGGGGCTC
CTTGGTGCAGAGGGGGCTCCACGGTGCAGAGAGGGAAGGGTCCCTCCTCCAGAGAGCTA
hide sequence
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| RefSeq Acc Id: |
XP_005379663 ⟸ XM_005379606 |
| - Sequence: |
MLRRSLPQVLCLGLILVLAANLLLVFHTKETVQNLIRDGLHKETHRPPSERDETMMNRLSHLEV
AVQQLKENMKLAMKQQANVGDTLMRVEDEIHLAPKAVQGNVVKTNKPQPPKKLFSTSALFRQWG
EGLAEAEQRKAQDLFQRFGYNVYLSNQLPLNRSIPDTRDSRCLQKTYPAQLPSLSVILIFVDEA
LSVIQRAITSVINRTPPQVLKEIILVDDFSSNGELKVPLDEKIEFYNKMYPGLLKIIRHAKRKG
LAHARNTGWEAARADVVVILDAHVEVNVGWAEPILARIQEDRTVIISPVFDNICFDTFKLLKYE
LAVDGFNWELWCRYDPVPQTWIALDDVTAPVRSPSIMGILAANRLFLGEIGALDDGMLVYGGEN
VELSLRVWQCGGKIEVLPCSRVGHLERHHKPYALDLSLSLKRNALRVAETWMDEYKYMVYLAWN
LPLQNSGIDYGDISSKRVLRENLKCKTFDWYLKNVYPALKPILNIVGYGRMKNSLDKGVCLDRG
PVPGNTPIMYACHEFSSQNVYYLLTGEFYVGPLVAEVLRDDLCLTDPGHREKPTLEKCSNAAQN
KLHIYWDFKQGGAVINRDTQRCLEIRREPSGAYGLVLQTCMAQVWEIQYTFGAWGQTNAL
hide sequence
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Additional Information
External Database Links
| Database |
Acc Id |
Source(s) |
| NCBI Gene |
Galnt8 |
ENTREZGENE |
Nomenclature History
| Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
| 2015-08-25 |
Galnt8 |
polypeptide N-acetylgalactosaminyltransferase 8 |
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UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8) |
Symbol and/or name change |
5135510 |
APPROVED |
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