CUNH14orf28 (chromosome unknown C14orf28 homolog) - Rat Genome Database

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Gene: CUNH14orf28 (chromosome unknown C14orf28 homolog) Chinchilla lanigera
Analyze
Symbol: CUNH14orf28 (Ensembl: C14orf28)
Name: chromosome unknown C14orf28 homolog (Ensembl:chromosome 14 open reading frame 28)
RGD ID: 9020724
Description: INVOLVED IN cAMP-mediated signaling (ortholog); G protein-coupled dopamine receptor signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); Fanconi anemia (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: chromosome unknown open reading frame, human C14orf28; LOC102011283; uncharacterized protein C14orf28 homolog
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540917,012,125 - 17,024,784 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540917,014,194 - 17,023,953 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

Genomics

Comparative Map Data
CUNH14orf28
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540917,012,125 - 17,024,784 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540917,014,194 - 17,023,953 (-)NCBIChiLan1.0ChiLan1.0
C14orf28
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381444,897,275 - 44,907,257 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1444,897,275 - 44,907,257 (+)EnsemblGRCh38hg38GRCh38
GRCh371445,366,478 - 45,376,460 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361444,436,257 - 44,446,210 (+)NCBINCBI36Build 36hg18NCBI36
Celera1425,227,762 - 25,237,715 (+)NCBICelera
Cytogenetic Map14q21.2NCBI
HuRef1425,477,418 - 25,487,371 (+)NCBIHuRef
CHM1_11445,304,736 - 45,314,689 (+)NCBICHM1_1
T2T-CHM13v2.01439,089,234 - 39,099,216 (+)NCBIT2T-CHM13v2.0
Gm527
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391264,964,685 - 64,971,365 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1264,964,680 - 64,971,366 (+)EnsemblGRCm39 Ensembl
GRCm381264,917,911 - 64,924,591 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1264,917,906 - 64,924,592 (+)EnsemblGRCm38mm10GRCm38
MGSCv371266,018,898 - 66,025,578 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361265,836,516 - 65,843,196 (+)NCBIMGSCv36mm8
Celera1266,050,413 - 66,054,197 (+)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1227.21NCBI
C6h14orf28
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8688,701,651 - 88,710,204 (+)NCBIGRCr8
mRatBN7.2682,965,304 - 82,973,942 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl682,965,328 - 82,972,558 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx683,325,212 - 83,332,215 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0683,624,575 - 83,631,578 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0683,066,308 - 83,073,315 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0686,651,196 - 86,659,371 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl686,651,196 - 86,659,371 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0696,145,979 - 96,155,042 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4686,256,155 - 86,263,086 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1686,262,235 - 86,266,292 (+)NCBI
Celera681,533,197 - 81,540,085 (+)NCBICelera
Cytogenetic Map6q24NCBI
C15H14orf28
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21546,070,659 - 46,080,698 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11445,287,154 - 45,297,194 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01425,514,741 - 25,524,710 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11443,843,018 - 43,852,917 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1443,843,018 - 43,852,917 (+)Ensemblpanpan1.1panPan2
C8H14orf28
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1822,366,822 - 22,378,411 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl822,369,790 - 22,375,025 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha822,184,834 - 22,196,392 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0822,525,913 - 22,537,473 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl822,526,893 - 22,535,764 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1822,188,391 - 22,199,954 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0822,254,701 - 22,266,253 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0822,590,803 - 22,602,360 (+)NCBIUU_Cfam_GSD_1.0
CUNH14orf28
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864054,323,411 - 54,333,350 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365834,355,492 - 4,363,107 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365834,355,562 - 4,365,470 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C1H14orf28
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1175,145,913 - 175,156,606 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11175,145,918 - 175,156,597 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21194,910,933 - 194,921,563 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH14orf28
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12422,015,251 - 22,026,008 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2422,015,206 - 22,026,001 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666116513,820 - 524,488 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CUNH14orf28
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473123,595,490 - 23,605,374 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000018287   ⟹   ENSCLAP00000018109
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495540917,012,125 - 17,024,784 (-)Ensembl
RefSeq Acc Id: XM_005376875   ⟹   XP_005376932
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495540917,014,194 - 17,023,953 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005376932 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000018109
  ENSCLAP00000018109.1
RefSeq Acc Id: XP_005376932   ⟸   XM_005376875
- UniProtKB: A0A8C2VN26 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000018109   ⟸   ENSCLAT00000018287


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000012418 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000018287 ENTREZGENE
  ENSCLAT00000018287.1 UniProtKB/TrEMBL
InterPro C14orf28-like UniProtKB/TrEMBL
NCBI Gene LOC102011283 ENTREZGENE
PANTHER HYPOTHETICAL LOC314168 UniProtKB/TrEMBL
  PTHR35350 UniProtKB/TrEMBL
UniProt A0A8C2VN26 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-07-06 CUNH14orf28  chromosome unknown C14orf28 homolog  LOC102011283  chromosome unknown open reading frame, human C14orf28  Symbol and/or name change 5135510 APPROVED