Slf1 (SMC5-SMC6 complex localization factor 1)

Advanced Search (OLGA)

Gene: Slf1 (SMC5-SMC6 complex localization factor 1) Chinchilla lanigera

Analyze

Symbol:

Slf1

Name:

SMC5-SMC6 complex localization factor 1

RGD ID:

9018215

Description:

ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of double-strand break repair (ortholog); positive regulation of maintenance of mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear inclusion body (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

Ankrd32; ankyrin repeat domain 32; ankyrin repeat domain-containing protein 32

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	17,756,861 - 17,810,663 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	17,756,610 - 17,818,552 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial adenomatous polyposis 1 (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA damage response (ISO)

positive regulation of double-strand break repair (ISO)

positive regulation of maintenance of mitotic sister chromatid cohesion (ISO)

positive regulation of protein-containing complex assembly (ISO)

protein localization to site of double-strand break (ISO)

Cellular Component

centrosome (ISO)

cytoplasm (ISO)

nuclear inclusion body (ISO)

nucleoplasm (ISO)

nucleosome (ISO)

nucleus (ISO)

site of double-strand break (ISO)

Molecular Function

protein binding (ISO)

protein-containing complex binding (ISO)

ubiquitin protein ligase binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Slf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	17,756,861 - 17,810,663 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	17,756,610 - 17,818,552 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	94,618,231 - 94,697,621 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	94,618,669 - 94,739,436 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	93,954,374 - 94,033,326 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	94,040,330 - 94,057,338 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	94,040,329 - 94,057,110	NCBI
Celera	5	89,816,284 - 89,893,469 (+)	NCBI		Celera
Cytogenetic Map	5	q15	NCBI
HuRef	5	89,127,664 - 89,204,854 (+)	NCBI		HuRef
CHM1_1	5	93,387,020 - 93,464,202 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	95,098,399 - 95,182,005 (+)	NCBI		T2T-CHM13v2.0

Slf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	77,191,207 - 77,283,632 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	77,191,207 - 77,283,592 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	77,043,088 - 77,135,513 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	77,043,088 - 77,135,473 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	77,182,349 - 77,274,729 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	77,506,638 - 77,554,806 (-)	NCBI		MGSCv36	mm8
Celera	13	79,368,270 - 79,463,257 (-)	NCBI		Celera
Cytogenetic Map	13	C1	NCBI
cM Map	13	40.98	NCBI

Slf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	8,498,776 - 8,606,251 (-)	NCBI		GRCr8
mRatBN7.2	2	6,767,015 - 6,874,428 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	6,767,015 - 6,867,149 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	13,879,067 - 13,986,283 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	11,978,347 - 12,085,564 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	6,613,410 - 6,719,621 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	4,095,126 - 4,195,819 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	4,095,129 - 4,195,810 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	4,092,109 - 4,193,740 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	4,361,776 - 4,469,805 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	4,436,397 - 4,492,122 (-)	NCBI
Celera	2	3,225,433 - 3,326,221 (-)	NCBI		Celera
Cytogenetic Map	2	q11	NCBI

SLF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	20,684,529 - 20,782,033 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	18,838,281 - 18,935,816 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	20,660,101 - 20,757,072 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	20,817,614 - 20,894,427 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	20,817,614 - 20,884,453 (-)	Ensembl	panpan1.1		panPan2

SLF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	14,792,851 - 14,877,024 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	14,793,363 - 14,869,755 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	16,131,131 - 16,215,470 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	14,672,489 - 14,756,866 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	14,670,381 - 14,744,679 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	14,635,334 - 14,719,686 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	14,633,850 - 14,718,174 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	14,837,537 - 14,921,894 (-)	NCBI		UU_Cfam_GSD_1.0

Slf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	170,378,075 - 170,449,166 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936523	8,563,410 - 8,634,585 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936523	8,563,662 - 8,634,576 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	101,313,091 - 101,375,607 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	101,286,744 - 101,375,612 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	104,867,972 - 104,919,338 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	88,497,787 - 88,573,966 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	88,499,373 - 88,576,983 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666049	37,141,458 - 37,236,741 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	13,337,785 - 13,395,618 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	13,327,544 - 13,394,434 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005382259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005382260	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005382261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013512986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01019157	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01019158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01187313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000007455 ⟹ ENSCLAP00000007338

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955418	17,756,861 - 17,810,663 (-)	Ensembl

RefSeq Acc Id:

XM_005382259 ⟹ XP_005382316

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955418	17,756,610 - 17,818,552 (-)	NCBI

Sequence:

show sequence

ATTATTTCCCAGAGCCCGGATTAGTGAATCGGCGAGAGTTGCTGCGGCAGTCGTCGCGCCTTTC
GCCGCCGCTGCCGCCACCGGAGGGAAGCAGCAGAGGCCCTTCGGCCAGGAAGATGGAAGATAAT
GCCCCAAAGCATGTCATCCAGATGACAGGGTTTAAGATGGAGGAAAAGGAAGCTCTGGGAAAAT
TGCTTTTAAAGCTAGATTGCACTTTTATTAAGAGTGAGAAATACAAAAACTGTACACATCTTAT
AGCCGAACGCTTATGTAAAAGTGAAAAGTTTTTAGCAGCTTGTGCTGCAGGAAAATGGGTACTA
ACTAAGGACTACATAATTCATAGTGCCAACAGTGGCAGATGGCTTGATGAAACAACTTATGAAT
GGGGATATAAAATTGAAAAAGACTCCCATTATTCACCTCAAATGCAATCTGCACCTAAAAGATG
GCGTGAGGAGCTGAAACGCTCTGGTGCTCCAGGAGCGTTCCACAGATGGAAAGTTGTCCTCCTT
GTTAGAGCTGATAAACGAAGTGATTCTCTTGTAAGAGTGTTAAAGGCTGGAAAGGCAAATGTTA
TTTTACCAAAAAGTTCACCAACTGGAGTAACTCATGTAATTGCCAGTAATGCAAGAATCAGTGC
TGAAAAAGAAAAAGATACCTTTAATGCTCCATTTTACCCGATTCAGTATCTAGGGGATTTTCTT
TTAGAGAGAGAAATTCAGAATGACGAAGATTCTCAAATTAGTTCTATTGGAAGTAAACCAAGCA
ATCAAGAAAAAAACAATGATTTCAGAAAAGATACGGGAGTTTTTGAAATGAAAAGTGCCTTAAG
AGAGACCATATGTAGAACCCAGAAAGAAATGCAAAATCATGATGAAGATGTTTGTTCTGCTGTG
AGTGAACATCACAAAAGAGAGAAATTCAGAGAAACTAGAGAAGACTTGAGATTTATTAAAATGA
GAAATACCTTAAGAAGTCATATATACGGAAATCAGAAGGATACTAAGAAAAAATACGAAGATAT
TCAAAGAAGTTATACTTTAAGGAAAAAACGCAAAAAAGAAACTGATTGCAAGAAAGACATCGAA
CATGACAAAATTAAAAGTACCTTAAGAAAACAAGTGTGTTACACAGATCAGAAAGAAATGAACA
GTTCTGTTTTCACTGATTATGCCAAAGAATCAAAACCCAAGGATATCAGGATGGATATGGATGT
CGTTGAAATAAAAAATATCTTAAGGAAGCACATATATAGAGCTCAGGCTGTCAGATACAACTGC
ATTAGAATAGAGAAACAACCAGTATACAACGTAGAGGTTAAAAATGCTGACTTTCCCAGAGGAA
TATTAAATTTAATTGAAAGCCTCATAGAAGGACAGTTTTTTAAAGAAGCAATGGAAGAGCTTTC
CTCGTTGCAAGCGCATTATGTCCCTCCCGTGTGCCTTCTTCATTCTCTTCTGGACAGCGTCCTA
CAGGATAAAATAGATACATTTTCTGGGCGATACTTTGATATATTGTCAGCTCTTCTTCGTCTGC
ATCCTCCTTGGAAATCTCCAACCATGTCAAGATACTACTTAGAGTTGTTTCAGTGTCCAACTTG
TATGAAAGGACCCTGGTCTCTGGTTGAAGCACTTATCAGGTCGTGTCTTTTTAATGAAAATTTT
TGTCATGAAATTTCACAAAACATTGACTCTAAGGTATTCCACCTTACATTGCTCAAATTTTTCT
TCAGTTTGGTTGAAAGTGAAGTCCAACATTTGAGTCAAAAGTTGTATGACTGTTCAGAGTCTCA
GAGTCTGAAAACAACAGGAAAGGCAATTCTCCTTGAAATCTTTTGGTCAGGAAATGAAACTTCT
GGGCTTTTGACCAAACCAGTAAATATGCTTTTAGAATGGACTATGTATTCTTACAAGGAAAAAT
GCAAATCCAATGACGTCTTCAGACATGAACTAGCTTACTTATTGACTGGAATTCTTGGAGCAGC
AATAGATTATTGGATCTTCCTTGGTCTTAAGATGGGTAGAAATGTGATGCGACACCTGTCTGAG
GACTTAGGAAGTTATATTTCCCTTACATGTGATGACTTTTCTTCACAGGAACTAGAGATTTTCA
TTTGCTCCTTTTCCTCCTCCTGGCTTCAAATGTTTGTTGCAGAAGCAGTCTTTAAAAAGTACTT
TTTTGATAATTCTTCTGAGCTGCTGTCGCTTCAGAAAATGGTAAATGGCTATTTGCGGGCTTTG
GGGAAAGCTAGTGTGCACAGGGCTGGGAAGGCGCATTTACCAAAGAAAACCGGACAGCGATCTT
GCCTTGAATCTCAGAGAGCCTTACTGATGCTGAACGGCGCAAAGCGGAAGCAAGGGGAAGGGCT
GCCCAGGTTACCAGAGCTGAGCCTTGCTAAATGTTCCCCATCATTAAAAAAATTGAAAAAGAAG
TCAGAAGGAGAATCACCATGGTCCAAGGAGAATTGCCCCAGTCTTAAAAAGATGAATATTCACA
AGACTAATCTAAAAGGAGAAACAGCCCTGCATAGGGCTTGCATAAGCAACAAAGTGGACAAATT
GATTTTACTTCTGTCTTTGCCAGGAATAGACATCAATGTTAAAGACAATGCTGGCTGGACGCCT
TTGCATGAAGCCTGTAACTATGGCAACACAGTGTGTGTCCAGGAAATTTTGCAGCGTTGTCCAG
AGGTAGATCTGCTCACTCAAGTGGACGGGGTGACTCCTTTGCATGACGCACTGTCCAACGGACA
TGTAGAAATTGGCAAGCTGCTGCTGCAGCACGGGGGCCCAGTGCTTTTACAGCAGAGAAATTCT
AAGGGGGAATTGCCCTTGGATTATGTGTTGTCCCCACAAATCAAGGAGGAGCTTTTTGCTATTG
CAAAAATAGAAGATACAGTGGAGAACTTTCATGCACAAGCAGAGAAACATTTTTACCACCAGCA
ACTCGAATTTGGTTCATTTTTACTCAGTAGGATGCTGCTAAATTTTTGTTCAATTTTTGATTTG
TCTTCAGAGTTCATCTTAGCTTTCCAAGGGTTAGCTCATCTGAATGAGCAGCTTATGGCTTATA
AAAGTTTTAAAGAAACCACCACGGCTCACACTGACTGGCTACTGGATCTTTATGATAGAAATAT
AAAGACATTGCAGGAGCTCCCCAATGTTCTGAAGGAACTGCCTGAGAATTTGAAATTATGTCCC
GGAGTACATACCGAGGCCTTACTGGTGACTTTGGAAATGATGTGTCGGTCACAGAATTTTCATG
ATGGTGCCACAAAGTACAGGTCAAGTTTCTAAACGTGGTCTGGTTTGCTTTGTAATTTAGTAGA
GACTTCAGAGCTTACTGACAAATATGAATACGATTTATTTATTAACTGATTATTCAGATTTGTG
AAATTTCAAAAACCCTTGAAAAATTTCTGCAGAACTAAAATATAAGCTTCTATTTCCAGGATGT
AGAATTTGATTAAGAAGTTTTTGAAAAAAAAGTTTTATTTGATTTTATTAATCTTTTATTAATA
AATTGCTTTTATTAAGCCTTTTGTTCT

hide sequence

RefSeq Acc Id:

XM_005382260 ⟹ XP_005382317

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955418	17,756,610 - 17,818,552 (-)	NCBI

Sequence:

show sequence

ATTATTTCCCAGAGCCCGGATTAGTGAATCGGCGAGAGTTGCTGCGGCAGTCGTCGCGCCTTTC
GCCGCCGCTGCCGCCACCGGAGGGAAGCAGCAGAGGCCCTTCGGCCAGGAAGTTTCAGTTTCAT
ATTTAAACATTACTAAAGAAAGAAACTGCTTTAAAAAGGCTTTCCCGATTTCTGCTTTTTATCC
AAGATGGAAGATAATGCCCCAAAGCATGTCATCCAGATGACAGGGTTTAAGATGGAGGAAAAGG
AAGCTCTGGGAAAATTGCTTTTAAAGCTAGATTGCACTTTTATTAAGAGTGAGAAATACAAAAA
CTGTACACATCTTATAGCCGAACGCTTATGTAAAAGTGAAAAGTTTTTAGCAGCTTGTGCTGCA
GGAAAATGGGTACTAACTAAGGACTACATAATTCATAGTGCCAACAGTGGCAGATGGCTTGATG
AAACAACTTATGAATGGGGATATAAAATTGAAAAAGACTCCCATTATTCACCTCAAATGCAATC
TGCACCTAAAAGATGGCGTGAGGAGCTGAAACGCTCTGGTGCTCCAGGAGCGTTCCACAGATGG
AAAGTTGTCCTCCTTGTTAGAGCTGATAAACGAAGTGATTCTCTTGTAAGAGTGTTAAAGGCTG
GAAAGGCAAATGTTATTTTACCAAAAAGTTCACCAACTGGAGTAACTCATGTAATTGCCAGTAA
TGCAAGAATCAGTGCTGAAAAAGAAAAAGATACCTTTAATGCTCCATTTTACCCGATTCAGTAT
CTAGGGGATTTTCTTTTAGAGAGAGAAATTCAGAATGACGAAGATTCTCAAATTAGTTCTATTG
GAAGTAAACCAAGCAATCAAGAAAAAAACAATGATTTCAGAAAAGATACGGGAGTTTTTGAAAT
GAAAAGTGCCTTAAGAGAGACCATATGTAGAACCCAGAAAGAAATGCAAAATCATGATGAAGAT
GTTTGTTCTGCTGTGAGTGAACATCACAAAAGAGAGAAATTCAGAGAAACTAGAGAAGACTTGA
GATTTATTAAAATGAGAAATACCTTAAGAAGTCATATATACGGAAATCAGAAGGATACTAAGAA
AAAATACGAAGATATTCAAAGAAGTTATACTTTAAGGAAAAAACGCAAAAAAGAAACTGATTGC
AAGAAAGACATCGAACATGACAAAATTAAAAGTACCTTAAGAAAACAAGTGTGTTACACAGATC
AGAAAGAAATGAACAGTTCTGTTTTCACTGATTATGCCAAAGAATCAAAACCCAAGGATATCAG
GATGGATATGGATGTCGTTGAAATAAAAAATATCTTAAGGAAGCACATATATAGAGCTCAGGCT
GTCAGATACAACTGCATTAGAATAGAGAAACAACCAGTATACAACGTAGAGGTTAAAAATGCTG
ACTTTCCCAGAGGAATATTAAATTTAATTGAAAGCCTCATAGAAGGACAGTTTTTTAAAGAAGC
AATGGAAGAGCTTTCCTCGTTGCAAGCGCATTATGTCCCTCCCGTGTGCCTTCTTCATTCTCTT
CTGGACAGCGTCCTACAGGATAAAATAGATACATTTTCTGGGCGATACTTTGATATATTGTCAG
CTCTTCTTCGTCTGCATCCTCCTTGGAAATCTCCAACCATGTCAAGATACTACTTAGAGTTGTT
TCAGTGTCCAACTTGTATGAAAGGACCCTGGTCTCTGGTTGAAGCACTTATCAGGTCGTGTCTT
TTTAATGAAAATTTTTGTCATGAAATTTCACAAAACATTGACTCTAAGGTATTCCACCTTACAT
TGCTCAAATTTTTCTTCAGTTTGGTTGAAAGTGAAGTCCAACATTTGAGTCAAAAGTTGTATGA
CTGTTCAGAGTCTCAGAGTCTGAAAACAACAGGAAAGGCAATTCTCCTTGAAATCTTTTGGTCA
GGAAATGAAACTTCTGGGCTTTTGACCAAACCAGTAAATATGCTTTTAGAATGGACTATGTATT
CTTACAAGGAAAAATGCAAATCCAATGACGTCTTCAGACATGAACTAGCTTACTTATTGACTGG
AATTCTTGGAGCAGCAATAGATTATTGGATCTTCCTTGGTCTTAAGATGGGTAGAAATGTGATG
CGACACCTGTCTGAGGACTTAGGAAGTTATATTTCCCTTACATGTGATGACTTTTCTTCACAGG
AACTAGAGATTTTCATTTGCTCCTTTTCCTCCTCCTGGCTTCAAATGTTTGTTGCAGAAGCAGT
CTTTAAAAAGTACTTTTTTGATAATTCTTCTGAGCTGCTGTCGCTTCAGAAAATGGTAAATGGC
TATTTGCGGGCTTTGGGGAAAGCTAGTGTGCACAGGGCTGGGAAGGCGCATTTACCAAAGAAAA
CCGGACAGCGATCTTGCCTTGAATCTCAGAGAGCCTTACTGATGCTGAACGGCGCAAAGCGGAA
GCAAGGGGAAGGGCTGCCCAGGTTACCAGAGCTGAGCCTTGCTAAATGTTCCCCATCATTAAAA
AAATTGAAAAAGAAGTCAGAAGGAGAATCACCATGGTCCAAGGAGAATTGCCCCAGTCTTAAAA
AGATGAATATTCACAAGACTAATCTAAAAGGAGAAACAGCCCTGCATAGGGCTTGCATAAGCAA
CAAAGTGGACAAATTGATTTTACTTCTGTCTTTGCCAGGAATAGACATCAATGTTAAAGACAAT
GCTGGCTGGACGCCTTTGCATGAAGCCTGTAACTATGGCAACACAGTGTGTGTCCAGGAAATTT
TGCAGCGTTGTCCAGAGGTAGATCTGCTCACTCAAGTGGACGGGGTGACTCCTTTGCATGACGC
ACTGTCCAACGGACATGTAGAAATTGGCAAGCTGCTGCTGCAGCACGGGGGCCCAGTGCTTTTA
CAGCAGAGAAATTCTAAGGGGGAATTGCCCTTGGATTATGTGTTGTCCCCACAAATCAAGGAGG
AGCTTTTTGCTATTGCAAAAATAGAAGATACAGTGGAGAACTTTCATGCACAAGCAGAGAAACA
TTTTTACCACCAGCAACTCGAATTTGGTTCATTTTTACTCAGTAGGATGCTGCTAAATTTTTGT
TCAATTTTTGATTTGTCTTCAGAGTTCATCTTAGCTTTCCAAGGGTTAGCTCATCTGAATGAGC
AGCTTATGGCTTATAAAAGTTTTAAAGAAACCACCACGGCTCACACTGACTGGCTACTGGATCT
TTATGATAGAAATATAAAGACATTGCAGGAGCTCCCCAATGTTCTGAAGGAACTGCCTGAGAAT
TTGAAATTATGTCCCGGAGTACATACCGAGGCCTTACTGGTGACTTTGGAAATGATGTGTCGGT
CACAGAATTTTCATGATGGTGCCACAAAGTACAGGTCAAGTTTCTAAACGTGGTCTGGTTTGCT
TTGTAATTTAGTAGAGACTTCAGAGCTTACTGACAAATATGAATACGATTTATTTATTAACTGA
TTATTCAGATTTGTGAAATTTCAAAAACCCTTGAAAAATTTCTGCAGAACTAAAATATAAGCTT
CTATTTCCAGGATGTAGAATTTGATTAAGAAGTTTTTGAAAAAAAAGTTTTATTTGATTTTATT
AATCTTTTATTAATAAATTGCTTTTATTAAGCCTTTTGTTCT

hide sequence

RefSeq Acc Id:

XM_005382261 ⟹ XP_005382318

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955418	17,756,610 - 17,811,663 (-)	NCBI

Sequence:

show sequence

CACAGAGACAGCTGCATGCTCTGCATGAAGGCCAGCTCTGGTCACAGTCACTATTTCTTTAGTT
ATGTGTGTTATGTAGTCGAAGATGGAAGATAATGCCCCAAAGCATGTCATCCAGATGACAGGGT
TTAAGATGGAGGAAAAGGAAGCTCTGGGAAAATTGCTTTTAAAGCTAGATTGCACTTTTATTAA
GAGTGAGAAATACAAAAACTGTACACATCTTATAGCCGAACGCTTATGTAAAAGTGAAAAGTTT
TTAGCAGCTTGTGCTGCAGGAAAATGGGTACTAACTAAGGACTACATAATTCATAGTGCCAACA
GTGGCAGATGGCTTGATGAAACAACTTATGAATGGGGATATAAAATTGAAAAAGACTCCCATTA
TTCACCTCAAATGCAATCTGCACCTAAAAGATGGCGTGAGGAGCTGAAACGCTCTGGTGCTCCA
GGAGCGTTCCACAGATGGAAAGTTGTCCTCCTTGTTAGAGCTGATAAACGAAGTGATTCTCTTG
TAAGAGTGTTAAAGGCTGGAAAGGCAAATGTTATTTTACCAAAAAGTTCACCAACTGGAGTAAC
TCATGTAATTGCCAGTAATGCAAGAATCAGTGCTGAAAAAGAAAAAGATACCTTTAATGCTCCA
TTTTACCCGATTCAGTATCTAGGGGATTTTCTTTTAGAGAGAGAAATTCAGAATGACGAAGATT
CTCAAATTAGTTCTATTGGAAGTAAACCAAGCAATCAAGAAAAAAACAATGATTTCAGAAAAGA
TACGGGAGTTTTTGAAATGAAAAGTGCCTTAAGAGAGACCATATGTAGAACCCAGAAAGAAATG
CAAAATCATGATGAAGATGTTTGTTCTGCTGTGAGTGAACATCACAAAAGAGAGAAATTCAGAG
AAACTAGAGAAGACTTGAGATTTATTAAAATGAGAAATACCTTAAGAAGTCATATATACGGAAA
TCAGAAGGATACTAAGAAAAAATACGAAGATATTCAAAGAAGTTATACTTTAAGGAAAAAACGC
AAAAAAGAAACTGATTGCAAGAAAGACATCGAACATGACAAAATTAAAAGTACCTTAAGAAAAC
AAGTGTGTTACACAGATCAGAAAGAAATGAACAGTTCTGTTTTCACTGATTATGCCAAAGAATC
AAAACCCAAGGATATCAGGATGGATATGGATGTCGTTGAAATAAAAAATATCTTAAGGAAGCAC
ATATATAGAGCTCAGGCTGTCAGATACAACTGCATTAGAATAGAGAAACAACCAGTATACAACG
TAGAGGTTAAAAATGCTGACTTTCCCAGAGGAATATTAAATTTAATTGAAAGCCTCATAGAAGG
ACAGTTTTTTAAAGAAGCAATGGAAGAGCTTTCCTCGTTGCAAGCGCATTATGTCCCTCCCGTG
TGCCTTCTTCATTCTCTTCTGGACAGCGTCCTACAGGATAAAATAGATACATTTTCTGGGCGAT
ACTTTGATATATTGTCAGCTCTTCTTCGTCTGCATCCTCCTTGGAAATCTCCAACCATGTCAAG
ATACTACTTAGAGTTGTTTCAGTGTCCAACTTGTATGAAAGGACCCTGGTCTCTGGTTGAAGCA
CTTATCAGGTCGTGTCTTTTTAATGAAAATTTTTGTCATGAAATTTCACAAAACATTGACTCTA
AGGTATTCCACCTTACATTGCTCAAATTTTTCTTCAGTTTGGTTGAAAGTGAAGTCCAACATTT
GAGTCAAAAGTTGTATGACTGTTCAGAGTCTCAGAGTCTGAAAACAACAGGAAAGGCAATTCTC
CTTGAAATCTTTTGGTCAGGAAATGAAACTTCTGGGCTTTTGACCAAACCAGTAAATATGCTTT
TAGAATGGACTATGTATTCTTACAAGGAAAAATGCAAATCCAATGACGTCTTCAGACATGAACT
AGCTTACTTATTGACTGGAATTCTTGGAGCAGCAATAGATTATTGGATCTTCCTTGGTCTTAAG
ATGGGTAGAAATGTGATGCGACACCTGTCTGAGGACTTAGGAAGTTATATTTCCCTTACATGTG
ATGACTTTTCTTCACAGGAACTAGAGATTTTCATTTGCTCCTTTTCCTCCTCCTGGCTTCAAAT
GTTTGTTGCAGAAGCAGTCTTTAAAAAGTACTTTTTTGATAATTCTTCTGAGCTGCTGTCGCTT
CAGAAAATGGTAAATGGCTATTTGCGGGCTTTGGGGAAAGCTAGTGTGCACAGGGCTGGGAAGG
CGCATTTACCAAAGAAAACCGGACAGCGATCTTGCCTTGAATCTCAGAGAGCCTTACTGATGCT
GAACGGCGCAAAGCGGAAGCAAGGGGAAGGGCTGCCCAGGTTACCAGAGCTGAGCCTTGCTAAA
TGTTCCCCATCATTAAAAAAATTGAAAAAGAAGTCAGAAGGAGAATCACCATGGTCCAAGGAGA
ATTGCCCCAGTCTTAAAAAGATGAATATTCACAAGACTAATCTAAAAGGAGAAACAGCCCTGCA
TAGGGCTTGCATAAGCAACAAAGTGGACAAATTGATTTTACTTCTGTCTTTGCCAGGAATAGAC
ATCAATGTTAAAGACAATGCTGGCTGGACGCCTTTGCATGAAGCCTGTAACTATGGCAACACAG
TGTGTGTCCAGGAAATTTTGCAGCGTTGTCCAGAGGTAGATCTGCTCACTCAAGTGGACGGGGT
GACTCCTTTGCATGACGCACTGTCCAACGGACATGTAGAAATTGGCAAGCTGCTGCTGCAGCAC
GGGGGCCCAGTGCTTTTACAGCAGAGAAATTCTAAGGGGGAATTGCCCTTGGATTATGTGTTGT
CCCCACAAATCAAGGAGGAGCTTTTTGCTATTGCAAAAATAGAAGATACAGTGGAGAACTTTCA
TGCACAAGCAGAGAAACATTTTTACCACCAGCAACTCGAATTTGGTTCATTTTTACTCAGTAGG
ATGCTGCTAAATTTTTGTTCAATTTTTGATTTGTCTTCAGAGTTCATCTTAGCTTTCCAAGGGT
TAGCTCATCTGAATGAGCAGCTTATGGCTTATAAAAGTTTTAAAGAAACCACCACGGCTCACAC
TGACTGGCTACTGGATCTTTATGATAGAAATATAAAGACATTGCAGGAGCTCCCCAATGTTCTG
AAGGAACTGCCTGAGAATTTGAAATTATGTCCCGGAGTACATACCGAGGCCTTACTGGTGACTT
TGGAAATGATGTGTCGGTCACAGAATTTTCATGATGGTGCCACAAAGTACAGGTCAAGTTTCTA
AACGTGGTCTGGTTTGCTTTGTAATTTAGTAGAGACTTCAGAGCTTACTGACAAATATGAATAC
GATTTATTTATTAACTGATTATTCAGATTTGTGAAATTTCAAAAACCCTTGAAAAATTTCTGCA
GAACTAAAATATAAGCTTCTATTTCCAGGATGTAGAATTTGATTAAGAAGTTTTTGAAAAAAAA
GTTTTATTTGATTTTATTAATCTTTTATTAATAAATTGCTTTTATTAAGCCTTTTGTTCT

hide sequence

RefSeq Acc Id:

XM_013512986 ⟹ XP_013368440

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955418	17,756,610 - 17,813,517 (-)	NCBI

Sequence:

show sequence

TACAAAGAAGAATAAACTCGAGGCTTTTACAGATGGAAGATAATGCCCCAAAGCATGTCATCCA
GATGACAGGGTTTAAGATGGAGGAAAAGGAAGCTCTGGGAAAATTGCTTTTAAAGCTAGATTGC
ACTTTTATTAAGAGTGAGAAATACAAAAACTGTACACATCTTATAGCCGAACGCTTATGTAAAA
GTGAAAAGTTTTTAGCAGCTTGTGCTGCAGGAAAATGGGTACTAACTAAGGACTACATAATTCA
TAGTGCCAACAGTGGCAGATGGCTTGATGAAACAACTTATGAATGGGGATATAAAATTGAAAAA
GACTCCCATTATTCACCTCAAATGCAATCTGCACCTAAAAGATGGCGTGAGGAGCTGAAACGCT
CTGGTGCTCCAGGAGCGTTCCACAGATGGAAAGTTGTCCTCCTTGTTAGAGCTGATAAACGAAG
TGATTCTCTTGTAAGAGTGTTAAAGGCTGGAAAGGCAAATGTTATTTTACCAAAAAGTTCACCA
ACTGGAGTAACTCATGTAATTGCCAGTAATGCAAGAATCAGTGCTGAAAAAGAAAAAGATACCT
TTAATGCTCCATTTTACCCGATTCAGTATCTAGGGGATTTTCTTTTAGAGAGAGAAATTCAGAA
TGACGAAGATTCTCAAATTAGTTCTATTGGAAGTAAACCAAGCAATCAAGAAAAAAACAATGAT
TTCAGAAAAGATACGGGAGTTTTTGAAATGAAAAGTGCCTTAAGAGAGACCATATGTAGAACCC
AGAAAGAAATGCAAAATCATGATGAAGATGTTTGTTCTGCTGTGAGTGAACATCACAAAAGAGA
GAAATTCAGAGAAACTAGAGAAGACTTGAGATTTATTAAAATGAGAAATACCTTAAGAAGTCAT
ATATACGGAAATCAGAAGGATACTAAGAAAAAATACGAAGATATTCAAAGAAGTTATACTTTAA
GGAAAAAACGCAAAAAAGAAACTGATTGCAAGAAAGACATCGAACATGACAAAATTAAAAGTAC
CTTAAGAAAACAAGTGTGTTACACAGATCAGAAAGAAATGAACAGTTCTGTTTTCACTGATTAT
GCCAAAGAATCAAAACCCAAGGATATCAGGATGGATATGGATGTCGTTGAAATAAAAAATATCT
TAAGGAAGCACATATATAGAGCTCAGGCTGTCAGATACAACTGCATTAGAATAGAGAAACAACC
AGTATACAACGTAGAGGTTAAAAATGCTGACTTTCCCAGAGGAATATTAAATTTAATTGAAAGC
CTCATAGAAGGACAGTTTTTTAAAGAAGCAATGGAAGAGCTTTCCTCGTTGCAAGCGCATTATG
TCCCTCCCGTGTGCCTTCTTCATTCTCTTCTGGACAGCGTCCTACAGGATAAAATAGATACATT
TTCTGGGCGATACTTTGATATATTGTCAGCTCTTCTTCGTCTGCATCCTCCTTGGAAATCTCCA
ACCATGTCAAGATACTACTTAGAGTTGTTTCAGTGTCCAACTTGTATGAAAGGACCCTGGTCTC
TGGTTGAAGCACTTATCAGGTCGTGTCTTTTTAATGAAAATTTTTGTCATGAAATTTCACAAAA
CATTGACTCTAAGGTATTCCACCTTACATTGCTCAAATTTTTCTTCAGTTTGGTTGAAAGTGAA
GTCCAACATTTGAGTCAAAAGTTGTATGACTGTTCAGAGTCTCAGAGTCTGAAAACAACAGGAA
AGGCAATTCTCCTTGAAATCTTTTGGTCAGGAAATGAAACTTCTGGGCTTTTGACCAAACCAGT
AAATATGCTTTTAGAATGGACTATGTATTCTTACAAGGAAAAATGCAAATCCAATGACGTCTTC
AGACATGAACTAGCTTACTTATTGACTGGAATTCTTGGAGCAGCAATAGATTATTGGATCTTCC
TTGGTCTTAAGATGGGTAGAAATGTGATGCGACACCTGTCTGAGGACTTAGGAAGTTATATTTC
CCTTACATGTGATGACTTTTCTTCACAGGAACTAGAGATTTTCATTTGCTCCTTTTCCTCCTCC
TGGCTTCAAATGTTTGTTGCAGAAGCAGTCTTTAAAAAGTACTTTTTTGATAATTCTTCTGAGC
TGCTGTCGCTTCAGAAAATGGTAAATGGCTATTTGCGGGCTTTGGGGAAAGCTAGTGTGCACAG
GGCTGGGAAGGCGCATTTACCAAAGAAAACCGGACAGCGATCTTGCCTTGAATCTCAGAGAGCC
TTACTGATGCTGAACGGCGCAAAGCGGAAGCAAGGGGAAGGGCTGCCCAGGTTACCAGAGCTGA
GCCTTGCTAAATGTTCCCCATCATTAAAAAAATTGAAAAAGAAGTCAGAAGGAGAATCACCATG
GTCCAAGGAGAATTGCCCCAGTCTTAAAAAGATGAATATTCACAAGACTAATCTAAAAGGAGAA
ACAGCCCTGCATAGGGCTTGCATAAGCAACAAAGTGGACAAATTGATTTTACTTCTGTCTTTGC
CAGGAATAGACATCAATGTTAAAGACAATGCTGGCTGGACGCCTTTGCATGAAGCCTGTAACTA
TGGCAACACAGTGTGTGTCCAGGAAATTTTGCAGCGTTGTCCAGAGGTAGATCTGCTCACTCAA
GTGGACGGGGTGACTCCTTTGCATGACGCACTGTCCAACGGACATGTAGAAATTGGCAAGCTGC
TGCTGCAGCACGGGGGCCCAGTGCTTTTACAGCAGAGAAATTCTAAGGGGGAATTGCCCTTGGA
TTATGTGTTGTCCCCACAAATCAAGGAGGAGCTTTTTGCTATTGCAAAAATAGAAGATACAGTG
GAGAACTTTCATGCACAAGCAGAGAAACATTTTTACCACCAGCAACTCGAATTTGGTTCATTTT
TACTCAGTAGGATGCTGCTAAATTTTTGTTCAATTTTTGATTTGTCTTCAGAGTTCATCTTAGC
TTTCCAAGGGTTAGCTCATCTGAATGAGCAGCTTATGGCTTATAAAAGTTTTAAAGAAACCACC
ACGGCTCACACTGACTGGCTACTGGATCTTTATGATAGAAATATAAAGACATTGCAGGAGCTCC
CCAATGTTCTGAAGGAACTGCCTGAGAATTTGAAATTATGTCCCGGAGTACATACCGAGGCCTT
ACTGGTGACTTTGGAAATGATGTGTCGGTCACAGAATTTTCATGATGGTGCCACAAAGTACAGG
TCAAGTTTCTAAACGTGGTCTGGTTTGCTTTGTAATTTAGTAGAGACTTCAGAGCTTACTGACA
AATATGAATACGATTTATTTATTAACTGATTATTCAGATTTGTGAAATTTCAAAAACCCTTGAA
AAATTTCTGCAGAACTAAAATATAAGCTTCTATTTCCAGGATGTAGAATTTGATTAAGAAGTTT
TTGAAAAAAAAGTTTTATTTGATTTTATTAATCTTTTATTAATAAATTGCTTTTATTAAGCCTT
TTGTTCT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005382316	(Get FASTA)	NCBI Sequence Viewer
	XP_005382317	(Get FASTA)	NCBI Sequence Viewer
	XP_005382318	(Get FASTA)	NCBI Sequence Viewer
	XP_013368440	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000007338
	ENSCLAP00000007338.1

RefSeq Acc Id:

XP_005382316 ⟸ XM_005382259

- UniProtKB:

A0A8C2V033 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEDNAPKHVIQMTGFKMEEKEALGKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAG
KWVLTKDYIIHSANSGRWLDETTYEWGYKIEKDSHYSPQMQSAPKRWREELKRSGAPGAFHRWK
VVLLVRADKRSDSLVRVLKAGKANVILPKSSPTGVTHVIASNARISAEKEKDTFNAPFYPIQYL
GDFLLEREIQNDEDSQISSIGSKPSNQEKNNDFRKDTGVFEMKSALRETICRTQKEMQNHDEDV
CSAVSEHHKREKFRETREDLRFIKMRNTLRSHIYGNQKDTKKKYEDIQRSYTLRKKRKKETDCK
KDIEHDKIKSTLRKQVCYTDQKEMNSSVFTDYAKESKPKDIRMDMDVVEIKNILRKHIYRAQAV
RYNCIRIEKQPVYNVEVKNADFPRGILNLIESLIEGQFFKEAMEELSSLQAHYVPPVCLLHSLL
DSVLQDKIDTFSGRYFDILSALLRLHPPWKSPTMSRYYLELFQCPTCMKGPWSLVEALIRSCLF
NENFCHEISQNIDSKVFHLTLLKFFFSLVESEVQHLSQKLYDCSESQSLKTTGKAILLEIFWSG
NETSGLLTKPVNMLLEWTMYSYKEKCKSNDVFRHELAYLLTGILGAAIDYWIFLGLKMGRNVMR
HLSEDLGSYISLTCDDFSSQELEIFICSFSSSWLQMFVAEAVFKKYFFDNSSELLSLQKMVNGY
LRALGKASVHRAGKAHLPKKTGQRSCLESQRALLMLNGAKRKQGEGLPRLPELSLAKCSPSLKK
LKKKSEGESPWSKENCPSLKKMNIHKTNLKGETALHRACISNKVDKLILLLSLPGIDINVKDNA
GWTPLHEACNYGNTVCVQEILQRCPEVDLLTQVDGVTPLHDALSNGHVEIGKLLLQHGGPVLLQ
QRNSKGELPLDYVLSPQIKEELFAIAKIEDTVENFHAQAEKHFYHQQLEFGSFLLSRMLLNFCS
IFDLSSEFILAFQGLAHLNEQLMAYKSFKETTTAHTDWLLDLYDRNIKTLQELPNVLKELPENL
KLCPGVHTEALLVTLEMMCRSQNFHDGATKYRSSF

hide sequence

RefSeq Acc Id:

XP_005382317 ⟸ XM_005382260

- UniProtKB:

A0A8C2V033 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEDNAPKHVIQMTGFKMEEKEALGKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAG
KWVLTKDYIIHSANSGRWLDETTYEWGYKIEKDSHYSPQMQSAPKRWREELKRSGAPGAFHRWK
VVLLVRADKRSDSLVRVLKAGKANVILPKSSPTGVTHVIASNARISAEKEKDTFNAPFYPIQYL
GDFLLEREIQNDEDSQISSIGSKPSNQEKNNDFRKDTGVFEMKSALRETICRTQKEMQNHDEDV
CSAVSEHHKREKFRETREDLRFIKMRNTLRSHIYGNQKDTKKKYEDIQRSYTLRKKRKKETDCK
KDIEHDKIKSTLRKQVCYTDQKEMNSSVFTDYAKESKPKDIRMDMDVVEIKNILRKHIYRAQAV
RYNCIRIEKQPVYNVEVKNADFPRGILNLIESLIEGQFFKEAMEELSSLQAHYVPPVCLLHSLL
DSVLQDKIDTFSGRYFDILSALLRLHPPWKSPTMSRYYLELFQCPTCMKGPWSLVEALIRSCLF
NENFCHEISQNIDSKVFHLTLLKFFFSLVESEVQHLSQKLYDCSESQSLKTTGKAILLEIFWSG
NETSGLLTKPVNMLLEWTMYSYKEKCKSNDVFRHELAYLLTGILGAAIDYWIFLGLKMGRNVMR
HLSEDLGSYISLTCDDFSSQELEIFICSFSSSWLQMFVAEAVFKKYFFDNSSELLSLQKMVNGY
LRALGKASVHRAGKAHLPKKTGQRSCLESQRALLMLNGAKRKQGEGLPRLPELSLAKCSPSLKK
LKKKSEGESPWSKENCPSLKKMNIHKTNLKGETALHRACISNKVDKLILLLSLPGIDINVKDNA
GWTPLHEACNYGNTVCVQEILQRCPEVDLLTQVDGVTPLHDALSNGHVEIGKLLLQHGGPVLLQ
QRNSKGELPLDYVLSPQIKEELFAIAKIEDTVENFHAQAEKHFYHQQLEFGSFLLSRMLLNFCS
IFDLSSEFILAFQGLAHLNEQLMAYKSFKETTTAHTDWLLDLYDRNIKTLQELPNVLKELPENL
KLCPGVHTEALLVTLEMMCRSQNFHDGATKYRSSF

hide sequence

RefSeq Acc Id:

XP_005382318 ⟸ XM_005382261

- UniProtKB:

A0A8C2V033 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEDNAPKHVIQMTGFKMEEKEALGKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAG
KWVLTKDYIIHSANSGRWLDETTYEWGYKIEKDSHYSPQMQSAPKRWREELKRSGAPGAFHRWK
VVLLVRADKRSDSLVRVLKAGKANVILPKSSPTGVTHVIASNARISAEKEKDTFNAPFYPIQYL
GDFLLEREIQNDEDSQISSIGSKPSNQEKNNDFRKDTGVFEMKSALRETICRTQKEMQNHDEDV
CSAVSEHHKREKFRETREDLRFIKMRNTLRSHIYGNQKDTKKKYEDIQRSYTLRKKRKKETDCK
KDIEHDKIKSTLRKQVCYTDQKEMNSSVFTDYAKESKPKDIRMDMDVVEIKNILRKHIYRAQAV
RYNCIRIEKQPVYNVEVKNADFPRGILNLIESLIEGQFFKEAMEELSSLQAHYVPPVCLLHSLL
DSVLQDKIDTFSGRYFDILSALLRLHPPWKSPTMSRYYLELFQCPTCMKGPWSLVEALIRSCLF
NENFCHEISQNIDSKVFHLTLLKFFFSLVESEVQHLSQKLYDCSESQSLKTTGKAILLEIFWSG
NETSGLLTKPVNMLLEWTMYSYKEKCKSNDVFRHELAYLLTGILGAAIDYWIFLGLKMGRNVMR
HLSEDLGSYISLTCDDFSSQELEIFICSFSSSWLQMFVAEAVFKKYFFDNSSELLSLQKMVNGY
LRALGKASVHRAGKAHLPKKTGQRSCLESQRALLMLNGAKRKQGEGLPRLPELSLAKCSPSLKK
LKKKSEGESPWSKENCPSLKKMNIHKTNLKGETALHRACISNKVDKLILLLSLPGIDINVKDNA
GWTPLHEACNYGNTVCVQEILQRCPEVDLLTQVDGVTPLHDALSNGHVEIGKLLLQHGGPVLLQ
QRNSKGELPLDYVLSPQIKEELFAIAKIEDTVENFHAQAEKHFYHQQLEFGSFLLSRMLLNFCS
IFDLSSEFILAFQGLAHLNEQLMAYKSFKETTTAHTDWLLDLYDRNIKTLQELPNVLKELPENL
KLCPGVHTEALLVTLEMMCRSQNFHDGATKYRSSF

hide sequence

RefSeq Acc Id:

XP_013368440 ⟸ XM_013512986

- UniProtKB:

A0A8C2V033 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEDNAPKHVIQMTGFKMEEKEALGKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAG
KWVLTKDYIIHSANSGRWLDETTYEWGYKIEKDSHYSPQMQSAPKRWREELKRSGAPGAFHRWK
VVLLVRADKRSDSLVRVLKAGKANVILPKSSPTGVTHVIASNARISAEKEKDTFNAPFYPIQYL
GDFLLEREIQNDEDSQISSIGSKPSNQEKNNDFRKDTGVFEMKSALRETICRTQKEMQNHDEDV
CSAVSEHHKREKFRETREDLRFIKMRNTLRSHIYGNQKDTKKKYEDIQRSYTLRKKRKKETDCK
KDIEHDKIKSTLRKQVCYTDQKEMNSSVFTDYAKESKPKDIRMDMDVVEIKNILRKHIYRAQAV
RYNCIRIEKQPVYNVEVKNADFPRGILNLIESLIEGQFFKEAMEELSSLQAHYVPPVCLLHSLL
DSVLQDKIDTFSGRYFDILSALLRLHPPWKSPTMSRYYLELFQCPTCMKGPWSLVEALIRSCLF
NENFCHEISQNIDSKVFHLTLLKFFFSLVESEVQHLSQKLYDCSESQSLKTTGKAILLEIFWSG
NETSGLLTKPVNMLLEWTMYSYKEKCKSNDVFRHELAYLLTGILGAAIDYWIFLGLKMGRNVMR
HLSEDLGSYISLTCDDFSSQELEIFICSFSSSWLQMFVAEAVFKKYFFDNSSELLSLQKMVNGY
LRALGKASVHRAGKAHLPKKTGQRSCLESQRALLMLNGAKRKQGEGLPRLPELSLAKCSPSLKK
LKKKSEGESPWSKENCPSLKKMNIHKTNLKGETALHRACISNKVDKLILLLSLPGIDINVKDNA
GWTPLHEACNYGNTVCVQEILQRCPEVDLLTQVDGVTPLHDALSNGHVEIGKLLLQHGGPVLLQ
QRNSKGELPLDYVLSPQIKEELFAIAKIEDTVENFHAQAEKHFYHQQLEFGSFLLSRMLLNFCS
IFDLSSEFILAFQGLAHLNEQLMAYKSFKETTTAHTDWLLDLYDRNIKTLQELPNVLKELPENL
KLCPGVHTEALLVTLEMMCRSQNFHDGATKYRSSF

hide sequence

Ensembl Acc Id:

ENSCLAP00000007338 ⟸ ENSCLAT00000007455

Protein Domains

BRCT

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000005160	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000007455	ENTREZGENE
	ENSCLAT00000007455.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
	3.40.50.10190	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	BRCT_dom	UniProtKB/TrEMBL
	BRCT_dom_sf	UniProtKB/TrEMBL
	BRCT_SLF1	UniProtKB/TrEMBL
	Slf1	UniProtKB/TrEMBL
NCBI Gene	Ankrd32	ENTREZGENE
PANTHER	PTHR46677	UniProtKB/TrEMBL
	SMC5-SMC6 COMPLEX LOCALIZATION FACTOR PROTEIN 1	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	RTT107_BRCT_5	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
	BRCT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48403	UniProtKB/TrEMBL
	SSF52113	UniProtKB/TrEMBL
UniProt	A0A8C2V033	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-25	Slf1	SMC5-SMC6 complex localization factor 1	Ankrd32	ankyrin repeat domain 32	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar