Uxt (ubiquitously expressed prefoldin like chaperone) - Rat Genome Database

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Gene: Uxt (ubiquitously expressed prefoldin like chaperone) Chinchilla lanigera
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Symbol: Uxt
Name: ubiquitously expressed prefoldin like chaperone
RGD ID: 8987011
Description: ENCODES a protein that exhibits actin filament binding (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN centrosome cycle (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital disorder of glycosylation type IIm (ortholog); immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ubiquitously-expressed, prefoldin-like chaperone
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955516420,616 - 430,134 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955516421,402 - 429,804 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
UxtChinchillaautistic disorder  ISOUXT (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311
UxtChinchillacongenital disorder of glycosylation type IIm  ISOUXT (Homo sapiens)8554872ClinVar Annotator: match by term: DEVELOPMENTAL AND EPILEPTIC ENCEPHALOPATHY 22ClinVarPMID:28492532
UxtChinchillaimmune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome  ISOUXT (Homo sapiens)8554872ClinVar Annotator: match by term: Insulin-dependent diabetes mellitus secretory diarrhea syndromeClinVarPMID:11137992 more ...
UxtChinchillaneurodegeneration with brain iron accumulation 5  ISOUXT (Homo sapiens)8554872ClinVar Annotator: match by term: Beta-propeller protein-associated neurodegenerationClinVarPMID:28492532
UxtChinchillasyndromic X-linked intellectual disability Lubs type  ISOUXT (Homo sapiens)8554872ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs typeClinVarPMID:25741868
UxtChinchillaX-linked epilepsy with variable learning disabilities and behavior disorders  ISOUXT (Homo sapiens)8554872ClinVar more ...ClinVarPMID:28492532
UxtChinchillaX-linked severe congenital neutropenia  ISOUXT (Homo sapiens)8554872ClinVar Annotator: match by term: X-linked severe congenital neutropeniaClinVarPMID:10698340 more ...
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
UxtChinchillaProstatic Neoplasms  ISOUXT (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:19318562


Biological Process

  

Cellular Component

  

Molecular Function
1 to 18 of 18 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
UxtChinchillaactin filament binding NOT|enablesISOUXT (Homo sapiens)9068941 PMID:12762840HGNC-UCLPMID:12762840
UxtChinchillabeta-tubulin binding enablesISOUXT (Homo sapiens)9068941 PMID:12762840HGNC-UCLPMID:12762840
UxtChinchillachromatin binding enablesISOUXT (Homo sapiens)9068941 PMID:21730289UniProtPMID:21730289
UxtChinchillaprotein binding enablesISOUniProtKB:Q042069068941 PMID:17620405IntActPMID:17620405
UxtChinchillaprotein binding enablesISOUniProtKB:P0DPK4 more ...9068941 PMID:32296183IntActPMID:32296183
UxtChinchillaprotein binding enablesISOUniProtKB:O43684 and UniProtKB:Q999679068941 PMID:12762840HGNC-UCLPMID:12762840
UxtChinchillaprotein binding enablesISOUniProtKB:Q9UHV99068941 PMID:28514442IntActPMID:28514442
UxtChinchillaprotein binding enablesISOUniProtKB:Q7Z3S9 and UniProtKB:Q9P2869068941 PMID:31515488IntActPMID:31515488
UxtChinchillaprotein binding enablesISOUniProtKB:P60409 more ...9068941 PMID:25416956IntActPMID:25416956
UxtChinchillaprotein binding enablesISOUniProtKB:Q031129068941 PMID:17635584IntActPMID:17635584
UxtChinchillaprotein binding enablesISOUniProtKB:Q0D2N89068941 PMID:24021647IntActPMID:24021647
UxtChinchillaprotein binding enablesISOUniProtKB:Q9UNH59068941 PMID:16221885HGNC-UCLPMID:16221885
UxtChinchillaprotein binding enablesISOUniProtKB:Q9H6T3 and UniProtKB:Q9UHV99068941 PMID:25036637 and PMID:33961781IntActPMID:25036637 and PMID:33961781
UxtChinchillaprotein binding enablesISOUniProtKB:P169899068941 PMID:37608570IntActPMID:37608570
UxtChinchillaprotein binding enablesISOUniProtKB:O947639068941 PMID:21730289UniProtPMID:21730289
UxtChinchillaprotein binding enablesISOUniProtKB:P033729068941 PMID:28106301IntActPMID:28106301
UxtChinchillaprotein binding enablesISOUniProtKB:Q9H6T3 more ...9068941 PMID:20864032UniProtPMID:20864032
UxtChinchillatranscription corepressor activity enablesISOUXT (Homo sapiens)9068941 PMID:21730289UniProtPMID:21730289
1 to 18 of 18 rows


#
Reference Title
Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
PMID:22301074   PMID:30032202  



Uxt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955516420,616 - 430,134 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955516421,402 - 429,804 (+)NCBIChiLan1.0ChiLan1.0
UXT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X47,651,796 - 47,659,180 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX47,651,796 - 47,659,180 (-)EnsemblGRCh38hg38GRCh38
GRCh37X47,511,195 - 47,518,579 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X47,396,139 - 47,403,504 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X47,267,449 - 47,274,770NCBI
CeleraX51,706,458 - 51,713,823 (-)NCBICelera
Cytogenetic MapXp11.23NCBI
HuRefX45,223,944 - 45,231,332 (-)NCBIHuRef
CHM1_1X47,542,327 - 47,549,715 (-)NCBICHM1_1
T2T-CHM13v2.0X47,061,699 - 47,069,083 (-)NCBIT2T-CHM13v2.0
Uxt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X20,818,162 - 20,828,259 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX20,807,961 - 20,828,256 (-)EnsemblGRCm39 Ensembl
GRCm38X20,951,665 - 20,962,017 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX20,941,722 - 20,962,017 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X20,528,791 - 20,539,104 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X20,108,624 - 20,118,937 (-)NCBIMGSCv36mm8
CeleraX19,085,804 - 19,096,117 (-)NCBICelera
Cytogenetic MapXA1.3NCBI
cM MapX16.46NCBI
Uxt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X3,679,630 - 3,691,944 (+)NCBIGRCr8
mRatBN7.2X1,126,110 - 1,138,670 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX1,126,162 - 1,138,663 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX1,154,446 - 1,166,501 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X4,630,138 - 4,642,193 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X950,682 - 962,723 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X1,275,402 - 1,287,781 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX1,275,612 - 1,287,512 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X2,090,439 - 2,102,802 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X12,616,439 - 12,628,479 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X12,621,996 - 12,634,035 (-)NCBI
CeleraX1,695,268 - 1,707,300 (+)NCBICelera
Cytogenetic MapXq11NCBI
UXT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X49,278,273 - 49,285,734 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X49,281,645 - 49,289,111 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X40,087,712 - 40,095,164 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X47,983,770 - 47,991,169 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX47,983,770 - 47,991,148 (-)Ensemblpanpan1.1panPan2
UXT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X41,271,908 - 41,280,433 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX41,271,908 - 41,280,340 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX15,646,536 - 15,655,076 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X41,405,725 - 41,413,955 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX41,405,719 - 41,413,934 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X41,393,272 - 41,401,810 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X41,381,544 - 41,390,081 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X41,474,238 - 41,482,772 (-)NCBIUU_Cfam_GSD_1.0
Uxt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X33,577,677 - 33,587,087 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650213,418,403 - 13,427,767 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650213,419,520 - 13,427,777 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UXT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX42,176,145 - 42,184,079 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X42,176,142 - 42,184,131 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X47,294,749 - 47,302,738 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UXT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X44,828,836 - 44,836,433 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX44,828,841 - 44,835,985 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607610,083,180 - 10,090,625 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Uxt
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624978208,432 - 217,497 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624978209,222 - 216,909 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.






Ensembl Acc Id: ENSCLAT00000002301   ⟹   ENSCLAP00000002254
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_004955516420,616 - 430,134 (+)Ensembl
RefSeq Acc Id: XM_005408943   ⟹   XP_005409000
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955516421,402 - 429,804 (+)NCBI
Sequence:
Protein RefSeqs XP_005409000 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000002254
  ENSCLAP00000002254.1
RefSeq Acc Id: XP_005409000   ⟸   XM_005408943
- UniProtKB: A0A8C2YJ14 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000002254   ⟸   ENSCLAT00000002301



1 to 14 of 14 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCLAG00000001626 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000002301 ENTREZGENE
  ENSCLAT00000002301.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.370 UniProtKB/TrEMBL
InterPro Prefoldin UniProtKB/TrEMBL
  Prefoldin_subunit_alpha UniProtKB/TrEMBL
  UXT UniProtKB/TrEMBL
NCBI Gene Uxt ENTREZGENE
PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10 UniProtKB/TrEMBL
  PROTEIN UXT UniProtKB/TrEMBL
Pfam Prefoldin UniProtKB/TrEMBL
PRINTS UXTPROTEIN UniProtKB/TrEMBL
Superfamily-SCOP Prefoldin UniProtKB/TrEMBL
UniProt A0A8C2YJ14 ENTREZGENE, UniProtKB/TrEMBL
1 to 14 of 14 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Uxt  ubiquitously expressed prefoldin like chaperone    ubiquitously-expressed, prefoldin-like chaperone  Symbol and/or name change 5135510 APPROVED