Kcne3 (potassium voltage-gated channel subfamily E regulatory subunit 3) - Rat Genome Database

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Gene: Kcne3 (potassium voltage-gated channel subfamily E regulatory subunit 3) Chinchilla lanigera
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Symbol: Kcne3
Name: potassium voltage-gated channel subfamily E regulatory subunit 3
RGD ID: 8968662
Description: ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cellular chloride ion homeostasis (ortholog); negative regulation of delayed rectifier potassium channel activity (ortholog); negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 6 (ortholog); cardiomyopathy (ortholog); FOUND IN basolateral part of cell (ortholog); cytoplasm (ortholog); dendrite (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: potassium channel, voltage gated subfamily E regulatory beta subunit 3; potassium voltage-gated channel subfamily E member 3
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541417,166,546 - 17,200,353 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541417,166,537 - 17,200,385 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References


Genomics

Comparative Map Data
Kcne3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541417,166,546 - 17,200,353 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541417,166,537 - 17,200,385 (+)NCBIChiLan1.0ChiLan1.0
KCNE3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1174,454,841 - 74,467,729 (-)EnsemblGRCh38hg38GRCh38
GRCh381174,454,841 - 74,467,729 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371174,165,886 - 74,178,594 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361173,843,534 - 73,856,248 (-)NCBINCBI36hg18NCBI36
Build 341173,843,805 - 73,850,798NCBI
Celera1171,472,396 - 71,485,109 (-)NCBI
Cytogenetic Map11q13.4NCBI
HuRef1170,461,201 - 70,473,937 (-)NCBIHuRef
CHM1_11174,049,426 - 74,062,143 (-)NCBICHM1_1
Kcne3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39799,825,714 - 99,834,076 (+)NCBIGRCm39mm39
GRCm39 Ensembl799,825,709 - 99,834,076 (+)Ensembl
GRCm387100,176,507 - 100,184,869 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7100,176,502 - 100,184,869 (+)EnsemblGRCm38mm10GRCm38
MGSCv377107,327,207 - 107,333,374 (+)NCBIGRCm37mm9NCBIm37
MGSCv367100,052,780 - 100,058,947 (+)NCBImm8
Celera7100,513,245 - 100,519,198 (+)NCBICelera
Cytogenetic Map7E2NCBI
Kcne3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21154,523,903 - 154,530,865 (+)NCBI
Rnor_6.0 Ensembl1165,189,985 - 165,196,948 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01165,189,934 - 165,196,949 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01171,390,138 - 171,397,804 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41157,558,044 - 157,565,008 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11157,636,337 - 157,643,300 (+)NCBI
Celera1152,607,926 - 152,614,889 (+)NCBICelera
Cytogenetic Map1q32NCBI
KCNE3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11172,832,858 - 72,845,399 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1172,835,048 - 72,835,359 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01169,527,663 - 69,540,236 (-)NCBIMhudiblu_PPA_v0panPan3
KCNE3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12123,860,727 - 23,872,194 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2123,871,648 - 23,871,947 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2123,625,823 - 23,638,780 (+)NCBI
ROS_Cfam_1.02124,063,194 - 24,076,168 (+)NCBI
UMICH_Zoey_3.12123,860,571 - 23,873,532 (+)NCBI
UNSW_CanFamBas_1.02124,057,896 - 24,070,858 (+)NCBI
UU_Cfam_GSD_1.02123,975,487 - 23,988,456 (+)NCBI
Kcne3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494761,876,838 - 61,888,024 (-)NCBI
SpeTri2.0NW_0049364983,477,313 - 3,487,580 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNE3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl98,810,722 - 8,821,817 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.198,810,716 - 8,822,191 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.299,649,248 - 9,660,859 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCNE3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1165,699,558 - 65,710,305 (-)NCBI
ChlSab1.1 Ensembl165,700,156 - 65,700,467 (-)Ensembl
Vero_WHO_p1.0NW_02366604360,150,565 - 60,161,017 (+)NCBI
Kcne3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248172,593,649 - 2,607,462 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000023870   ⟹   ENSCLAP00000023645
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541417,166,546 - 17,200,353 (+)Ensembl
RefSeq Acc Id: XM_005379918   ⟹   XP_005379975
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541417,166,546 - 17,200,353 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005379919   ⟹   XP_005379976
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541417,189,418 - 17,200,385 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005379920   ⟹   XP_005379977
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541417,189,416 - 17,200,385 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005379922   ⟹   XP_005379979
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541417,168,151 - 17,200,385 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005379923   ⟹   XP_005379980
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541417,172,286 - 17,200,385 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013511942   ⟹   XP_013367396
RefSeq Status:
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541417,168,151 - 17,200,385 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001233141
RefSeq Status:
Type: NON-CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541417,166,537 - 17,168,720 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_005379975   ⟸   XM_005379918
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005379979   ⟸   XM_005379922
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_005379980   ⟸   XM_005379923
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_005379976   ⟸   XM_005379919
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005379977   ⟸   XM_005379920
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013367396   ⟸   XM_013511942
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCLAP00000023645   ⟸   ENSCLAT00000023870


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000016222 Ensembl, ENTREZGENE
Ensembl Protein ENSCLAP00000023645 ENTREZGENE
Ensembl Transcript ENSCLAT00000023870 ENTREZGENE
NCBI Gene LOC102007421 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Kcne3  potassium voltage-gated channel subfamily E regulatory subunit 3    potassium channel, voltage gated subfamily E regulatory beta subunit 3  Symbol and/or name change 5135510 APPROVED
2015-08-25 Kcne3  potassium channel, voltage gated subfamily E regulatory beta subunit 3  LOC102007421  potassium voltage-gated channel subfamily E member 3-like  Symbol and/or name change 5135510 APPROVED