Kcne3 (potassium voltage-gated channel, Isk-related subfamily, gene 3) - Rat Genome Database

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Gene: Kcne3 (potassium voltage-gated channel, Isk-related subfamily, gene 3) Mus musculus
Analyze
Symbol: Kcne3
Name: potassium voltage-gated channel, Isk-related subfamily, gene 3
RGD ID: 734232
MGI Page MGI
Description: Predicted to enable potassium channel activity; potassium channel regulator activity; and transmembrane transporter binding activity. Predicted to contribute to delayed rectifier potassium channel activity and voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization. Involved in intracellular chloride ion homeostasis; potassium ion transmembrane transport; and sodium ion transport. Is active in basolateral part of cell. Is expressed in several structures, including branchial arch; ear; forelimb bud; gut; and heart. Human ortholog(s) of this gene implicated in Brugada syndrome 6 and hypokalemic periodic paralysis. Orthologous to human KCNE3 (potassium voltage-gated channel subfamily E regulatory subunit 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2210017H05Rik; Mi; minimum potassium ion channel-related peptide 2; minK-related peptide 2; MiRP2; potassium channel subunit beta MiRP2; potassium voltage-gated channel subfamily E member 3
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39799,825,714 - 99,834,076 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl799,825,709 - 99,834,076 (+)EnsemblGRCm39 Ensembl
GRCm387100,176,507 - 100,184,869 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7100,176,502 - 100,184,869 (+)EnsemblGRCm38mm10GRCm38
MGSCv377107,327,207 - 107,333,374 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367100,052,780 - 100,058,947 (+)NCBIMGSCv36mm8
Celera7100,513,245 - 100,519,198 (+)NCBICelera
Cytogenetic Map7E2NCBI
cM Map754.33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (EXP)
amitrole  (ISO)
ammonium chloride  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP)
benzo[b]fluoranthene  (EXP)
Benzo[ghi]perylene  (EXP)
bisphenol A  (EXP,ISO)
butanal  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
Chromanol 293B  (EXP)
chrysene  (EXP)
cisplatin  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
dextran sulfate  (EXP)
dibenz[a,h]anthracene  (EXP)
diethyl maleate  (EXP)
dioxygen  (EXP)
dorsomorphin  (ISO)
entinostat  (ISO)
etoposide  (EXP)
folic acid  (EXP)
furan  (ISO)
genistein  (EXP,ISO)
gentamycin  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
L-methionine  (EXP)
leflunomide  (EXP,ISO)
lipopolysaccharide  (ISO)
methimazole  (ISO)
methylmercury chloride  (ISO)
mitomycin C  (EXP)
ozone  (EXP)
paracetamol  (EXP,ISO)
pentanal  (ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
potassium atom  (EXP)
progesterone  (EXP,ISO)
protein kinase inhibitor  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (ISO)
tetraphene  (EXP)
titanium dioxide  (EXP)
trichloroethene  (ISO)
triclosan  (ISO)
trovafloxacin  (EXP)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. MiRP1 forms IKr potassium channels with HERG and is associated with cardiac arrhythmia. Abbott GW, etal., Cell 1999 Apr 16;97(2):175-87.
2. MiRP2 forms potassium channels in skeletal muscle with Kv3.4 and is associated with periodic paralysis. Abbott GW, etal., Cell. 2001 Jan 26;104(2):217-31.
3. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11527966   PMID:11557234   PMID:11752298   PMID:12477932   PMID:12670483   PMID:15489334   PMID:16141072  
PMID:16141073   PMID:16463373   PMID:16985003   PMID:17560335   PMID:17698596   PMID:18554416   PMID:19129398   PMID:19623261   PMID:20051516   PMID:21084694   PMID:21267068   PMID:21873635  
PMID:22535667   PMID:24043815   PMID:24225147   PMID:24403551   PMID:24727472   PMID:25336743   PMID:26238476   PMID:26410412   PMID:26985008   PMID:27997827   PMID:28356343   PMID:29143340  
PMID:31754927   PMID:32554809   PMID:34910626  


Genomics

Comparative Map Data
Kcne3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39799,825,714 - 99,834,076 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl799,825,709 - 99,834,076 (+)EnsemblGRCm39 Ensembl
GRCm387100,176,507 - 100,184,869 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7100,176,502 - 100,184,869 (+)EnsemblGRCm38mm10GRCm38
MGSCv377107,327,207 - 107,333,374 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367100,052,780 - 100,058,947 (+)NCBIMGSCv36mm8
Celera7100,513,245 - 100,519,198 (+)NCBICelera
Cytogenetic Map7E2NCBI
cM Map754.33NCBI
KCNE3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381174,454,841 - 74,467,549 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1174,454,841 - 74,467,729 (-)EnsemblGRCh38hg38GRCh38
GRCh371174,165,886 - 74,178,594 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361173,843,534 - 73,856,248 (-)NCBINCBI36Build 36hg18NCBI36
Build 341173,843,805 - 73,850,798NCBI
Celera1171,472,396 - 71,485,109 (-)NCBICelera
Cytogenetic Map11q13.4NCBI
HuRef1170,461,201 - 70,473,937 (-)NCBIHuRef
CHM1_11174,049,426 - 74,062,143 (-)NCBICHM1_1
T2T-CHM13v2.01174,384,260 - 74,396,980 (-)NCBIT2T-CHM13v2.0
Kcne3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81163,936,035 - 163,942,998 (+)NCBIGRCr8
mRatBN7.21154,523,903 - 154,530,865 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1154,523,830 - 154,532,020 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1162,518,249 - 162,525,206 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01169,698,347 - 169,705,304 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01162,571,923 - 162,578,879 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01165,189,934 - 165,196,949 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1165,189,985 - 165,196,948 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01171,390,138 - 171,397,804 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41157,558,044 - 157,565,008 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11157,636,337 - 157,643,300 (+)NCBI
Celera1152,607,926 - 152,614,889 (+)NCBICelera
Cytogenetic Map1q32NCBI
Kcne3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541417,166,546 - 17,200,353 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541417,166,537 - 17,200,385 (+)NCBIChiLan1.0ChiLan1.0
KCNE3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2975,396,558 - 75,409,080 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11176,440,593 - 76,453,426 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01169,527,663 - 69,540,236 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11172,832,858 - 72,845,399 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1172,835,048 - 72,835,359 (-)Ensemblpanpan1.1panPan2
KCNE3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12123,860,727 - 23,872,194 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2123,871,648 - 23,871,947 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2123,625,823 - 23,638,780 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02124,063,194 - 24,076,168 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2124,074,135 - 24,074,434 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12123,860,571 - 23,873,532 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02124,057,896 - 24,070,858 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02123,975,487 - 23,988,456 (+)NCBIUU_Cfam_GSD_1.0
Kcne3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494761,876,838 - 61,888,024 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364983,478,039 - 3,478,350 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364983,477,313 - 3,487,580 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNE3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl98,810,720 - 8,822,494 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.198,810,716 - 8,822,191 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.299,649,248 - 9,660,859 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCNE3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1165,699,558 - 65,710,305 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl165,700,156 - 65,700,467 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604360,150,565 - 60,161,017 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kcne3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248172,513,539 - 2,606,682 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248172,593,649 - 2,607,462 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kcne3
207 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:424
Count of miRNA genes:103
Interacting mature miRNAs:105
Transcripts:ENSMUST00000049333, ENSMUST00000170954, ENSMUST00000178946, ENSMUST00000179842
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770143137104143379Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772263372106263372Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)773725965107725965Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse
10412110Cctq1_mcentral corneal thickness QTL 1 (mouse)Not determined780551681114551791Mouse
4142500Morq1_mmodifier of Rs1 QTL 1 (mouse)Not determined80551681114551791Mouse
27095930Ulnl10_mulna length 10, 16 week (mouse)780849748126699172Mouse
27095923Pglq3_mpelvic girdle length QTL 3, 5 week (mouse)781249748124199223Mouse
27095903Scvln10_msacral vertebrae length 2, 10 week (mouse)781449748126499172Mouse
27226765Tibl18_mtibia length 18, 16 week (mouse)781849748126499172Mouse
27226763Feml20_mfemur length 20, 16 week (mouse)785049208124199223Mouse
1301997Cia7_mcollagen induced arthritis QTL 7 (mouse)Not determined785365595112533819Mouse
1301647Elpt_melevated leptin (mouse)Not determined786500186120500329Mouse
1301188Heal6_mwound healing/regeneration 6 (mouse)Not determined787043932121044066Mouse
1302062Stheal6_msoft tissue heal 6 (mouse)Not determined787043932121044066Mouse
13463473Hbbcq4_mhemoglobin concentration QTL 4 (mouse)787043932121044066Mouse
1301781Capsq3_mcapsaicin sensitivity related QTL 3 (mouse)Not determined787143137119485380Mouse
27226769Tibl12_mtibia length 12, 10 week (mouse)787249208126499172Mouse
27226790Feml15_mfemur length 15, 10 week (mouse)787249208126499172Mouse
27095929Pglq8_mpelvic girdle length QTL 8, 10 week (mouse)787849208108099207Mouse
1357664Nba3_mNew Zealand Black autoimmunity 3 (mouse)Not determined791482996125483156Mouse
1301937Skull10_mskull morphology 10 (mouse)Not determined791482996125483156Mouse
13464255Ifvrq2_minfluenza virus resistance QTL 2 (mouse)792500698106455693Mouse
1300528Ssial3_msusceptibility to sialadenitis 3 (mouse)Not determined793391848127392041Mouse
1301478Eae26_msusceptibility to experimental allergic encephalomyelitis 26 (mouse)Not determined798164922132165010Mouse
13524850Asrq7_macoustic startle response 7 (mouse)798394974132394974Mouse

Markers in Region
Kcne3  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
cM Map7 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001190869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001360466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001360467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_020574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006508062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017322388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC121815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF076532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM936467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX514261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY096672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ832280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DV056972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EH094997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EH101376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000049333   ⟹   ENSMUSP00000039353
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,827,904 - 99,834,071 (+)Ensembl
GRCm38.p6 Ensembl7100,178,697 - 100,184,864 (+)Ensembl
RefSeq Acc Id: ENSMUST00000170954   ⟹   ENSMUSP00000130019
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,827,904 - 99,834,072 (+)Ensembl
GRCm38.p6 Ensembl7100,178,697 - 100,184,865 (+)Ensembl
RefSeq Acc Id: ENSMUST00000178946   ⟹   ENSMUSP00000136616
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,825,886 - 99,834,076 (+)Ensembl
GRCm38.p6 Ensembl7100,176,679 - 100,184,869 (+)Ensembl
RefSeq Acc Id: ENSMUST00000179842   ⟹   ENSMUSP00000136415
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,827,909 - 99,834,072 (+)Ensembl
GRCm38.p6 Ensembl7100,178,702 - 100,184,865 (+)Ensembl
RefSeq Acc Id: ENSMUST00000207358   ⟹   ENSMUSP00000146583
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,827,895 - 99,834,070 (+)Ensembl
GRCm38.p6 Ensembl7100,178,688 - 100,184,863 (+)Ensembl
RefSeq Acc Id: ENSMUST00000207995   ⟹   ENSMUSP00000147151
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,827,904 - 99,833,713 (+)Ensembl
GRCm38.p6 Ensembl7100,178,697 - 100,184,506 (+)Ensembl
RefSeq Acc Id: ENSMUST00000208260   ⟹   ENSMUSP00000147047
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,827,923 - 99,833,941 (+)Ensembl
GRCm38.p6 Ensembl7100,178,716 - 100,184,734 (+)Ensembl
RefSeq Acc Id: ENSMUST00000208555
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl799,825,709 - 99,831,976 (+)Ensembl
GRCm38.p6 Ensembl7100,176,502 - 100,182,769 (+)Ensembl
RefSeq Acc Id: NM_001190869   ⟹   NP_001177798
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,825,877 - 99,834,076 (+)NCBI
GRCm387100,176,670 - 100,184,869 (+)NCBI
Celera7100,511,210 - 100,519,199 (+)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190870   ⟹   NP_001177799
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,827,890 - 99,834,076 (+)NCBI
GRCm387100,178,683 - 100,184,869 (+)NCBI
Celera7100,511,210 - 100,519,199 (+)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190871   ⟹   NP_001177800
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,827,890 - 99,834,076 (+)NCBI
GRCm387100,178,683 - 100,184,869 (+)NCBI
Celera7100,511,210 - 100,519,199 (+)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190950   ⟹   NP_001177879
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,827,890 - 99,834,076 (+)NCBI
GRCm387100,178,683 - 100,184,869 (+)NCBI
Celera7100,511,210 - 100,519,199 (+)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001360466   ⟹   NP_001347395
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,825,877 - 99,834,076 (+)NCBI
GRCm387100,176,670 - 100,184,869 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001360467   ⟹   NP_001347396
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,827,890 - 99,834,076 (+)NCBI
GRCm387100,178,683 - 100,184,869 (+)NCBI
Sequence:
RefSeq Acc Id: NM_020574   ⟹   NP_065599
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,827,890 - 99,834,076 (+)NCBI
GRCm387100,178,683 - 100,184,869 (+)NCBI
MGSCv377107,327,207 - 107,333,374 (+)RGD
Celera7100,511,210 - 100,519,199 (+)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006508059   ⟹   XP_006508122
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,827,377 - 99,834,076 (+)NCBI
GRCm387100,178,170 - 100,184,869 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006508062   ⟹   XP_006508125
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,825,714 - 99,834,076 (+)NCBI
GRCm387100,176,507 - 100,184,869 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017322388   ⟹   XP_017177877
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39799,830,488 - 99,834,076 (+)NCBI
GRCm387100,181,281 - 100,184,869 (+)NCBI
Sequence:
RefSeq Acc Id: NP_065599   ⟸   NM_020574
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177798   ⟸   NM_001190869
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177800   ⟸   NM_001190871
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177799   ⟸   NM_001190870
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177879   ⟸   NM_001190950
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006508125   ⟸   XM_006508062
- Peptide Label: isoform X1
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006508122   ⟸   XM_006508059
- Peptide Label: isoform X1
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177877   ⟸   XM_017322388
- Peptide Label: isoform X1
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001347395   ⟸   NM_001360466
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001347396   ⟸   NM_001360467
- UniProtKB: Q9WTW2 (UniProtKB/Swiss-Prot),   Q545H9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000136616   ⟸   ENSMUST00000178946
RefSeq Acc Id: ENSMUSP00000039353   ⟸   ENSMUST00000049333
RefSeq Acc Id: ENSMUSP00000130019   ⟸   ENSMUST00000170954
RefSeq Acc Id: ENSMUSP00000136415   ⟸   ENSMUST00000179842
RefSeq Acc Id: ENSMUSP00000147047   ⟸   ENSMUST00000208260
RefSeq Acc Id: ENSMUSP00000146583   ⟸   ENSMUST00000207358
RefSeq Acc Id: ENSMUSP00000147151   ⟸   ENSMUST00000207995

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9WTW2-F1-model_v2 AlphaFold Q9WTW2 1-103 view protein structure

Promoters
RGD ID:8664905
Promoter ID:EPDNEW_M10484
Type:initiation region
Name:Kcne3_2
Description:Mus musculus potassium voltage-gated channel, Isk-related subfamily,gene 3 , transcript variant 7, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10485  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387100,176,670 - 100,176,730EPDNEW
RGD ID:8664907
Promoter ID:EPDNEW_M10485
Type:initiation region
Name:Kcne3_1
Description:Mus musculus potassium voltage-gated channel, Isk-related subfamily,gene 3 , transcript variant 7, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10484  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm387100,178,686 - 100,178,746EPDNEW
RGD ID:6841380
Promoter ID:MM_KWN:51705
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung
Transcripts:NM_020574,   UC009IMO.1,   UC009IMP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv367107,326,881 - 107,327,381 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1891124 AgrOrtholog
Ensembl Genes ENSMUSG00000035165 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000049333 ENTREZGENE
  ENSMUST00000049333.13 UniProtKB/Swiss-Prot
  ENSMUST00000170954 ENTREZGENE
  ENSMUST00000170954.10 UniProtKB/Swiss-Prot
  ENSMUST00000178946 ENTREZGENE
  ENSMUST00000178946.9 UniProtKB/Swiss-Prot
  ENSMUST00000179842 ENTREZGENE
  ENSMUST00000179842.3 UniProtKB/Swiss-Prot
  ENSMUST00000207358.2 UniProtKB/Swiss-Prot
  ENSMUST00000207995 ENTREZGENE
  ENSMUST00000207995.2 UniProtKB/Swiss-Prot
  ENSMUST00000208260 ENTREZGENE
  ENSMUST00000208260.2 UniProtKB/Swiss-Prot
InterPro K_chnl_KCNE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  K_chnl_volt-dep_bsu_KCNE3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:57442 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1891124 ENTREZGENE
NCBI Gene 57442 ENTREZGENE
PANTHER PTHR15282 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15282:SF6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ISK_Channel UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB KCNE3 RGD
PhenoGen Kcne3 PhenoGen
PRINTS KCNE3CHANNEL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KCNECHANNEL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt KCNE3_MOUSE UniProtKB/Swiss-Prot
  Q545H9 ENTREZGENE, UniProtKB/TrEMBL
  Q9WTW2 ENTREZGENE