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Gene: Sstr2 (somatostatin receptor 2) Chinchilla lanigera

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Symbol:

Sstr2

Name:

somatostatin receptor 2

RGD ID:

8908424

Description:

ENCODES a protein that exhibits PDZ domain binding (ortholog); protein heterodimerization activity (ortholog); somatostatin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Experimental Diabetes Mellitus (ortholog); neuroendocrine tumor (ortholog); FOUND IN cytosol (ortholog); G protein-coupled receptor heterodimeric complex (ortholog); membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

somatostatin receptor type 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SSTR2 (somatostatin receptor 2)	NCBI	Ortholog
Mus musculus (house mouse):	Sstr2 (somatostatin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Sstr2 (somatostatin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SSTR2 (somatostatin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SSTR2 (somatostatin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sstr2 (somatostatin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SSTR2 (somatostatin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SSTR2 (somatostatin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Sstr2 (somatostatin receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955478	60,489 - 90,209 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955478	61,126 - 123,806 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Sstr2	Chinchilla	Brain Injuries		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:11879809 and REF_RGD_ID:2325002
Sstr2	Chinchilla	Experimental Diabetes Mellitus		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:7956902 and REF_RGD_ID:2325008

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Sstr2	Chinchilla	neuroendocrine tumor		ISO	SSTR2 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:17625444
Sstr2	Chinchilla	pancreatic cancer		ISO	SSTR2 (Homo sapiens)	9068941	CTD more ...	CTD	PMID:15259086 more ...
Sstr2	Chinchilla	paraganglioma		ISO	SSTR2 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:29163802
Sstr2	Chinchilla	status epilepticus		ISO	SSTR2 (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:18951627

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Sstr2	Chinchilla	adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway	acts_upstream_of_or_within	ISO	Sstr2 (Mus musculus)	9068941	PMID:9166719	MGI	PMID:9166719
Sstr2	Chinchilla	cellular response to estradiol stimulus		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:9564833 and REF_RGD_ID:2325004
Sstr2	Chinchilla	cellular response to glucocorticoid stimulus		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:14512709 and REF_RGD_ID:2325001
Sstr2	Chinchilla	cerebellum development		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:9166718 and REF_RGD_ID:2325007
Sstr2	Chinchilla	forebrain development		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:10805921 and REF_RGD_ID:2325003
Sstr2	Chinchilla	G protein-coupled receptor signaling pathway	acts_upstream_of_or_within	ISO	Sstr2 (Mus musculus)	9068941	PMID:7929134	MGI	PMID:7929134
Sstr2	Chinchilla	negative regulation of growth hormone secretion	involved_in	ISO	SSTR2 (Sus scrofa)	9068941	PMID:16543371	AgBase	PMID:16543371
Sstr2	Chinchilla	neuropeptide signaling pathway	acts_upstream_of_or_within	ISO	Sstr2 (Mus musculus)	9068941	PMID:9166719	MGI	PMID:9166719
Sstr2	Chinchilla	peristalsis		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:12504886 and REF_RGD_ID:727490
Sstr2	Chinchilla	response to starvation		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:7956902 and REF_RGD_ID:2325008
Sstr2	Chinchilla	spermatogenesis		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:9421433 and REF_RGD_ID:2325005

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Sstr2	Chinchilla	cytosol	located_in	ISO	SSTR2 (Homo sapiens)	9068941		HPA	GO_REF:0000052
Sstr2	Chinchilla	G protein-coupled receptor heterodimeric complex	part_of	ISO	SSTR2 (Sus scrofa)	9068941	PMID:24368669	AgBase	PMID:24368669
Sstr2	Chinchilla	membrane	located_in	ISO	Sstr2 (Mus musculus)	9068941	PMID:7929134	MGI	PMID:7929134
Sstr2	Chinchilla	nucleoplasm	located_in	ISO	SSTR2 (Homo sapiens)	9068941		HPA	GO_REF:0000052
Sstr2	Chinchilla	plasma membrane	located_in	ISO	SSTR2 (Sus scrofa)	9068941	PMID:24368669	AgBase	PMID:24368669
Sstr2	Chinchilla	plasma membrane	located_in	ISO	Sstr2 (Mus musculus)	9068941	PMID:9166719	MGI	PMID:9166719

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Sstr2	Chinchilla	PDZ domain binding	enables	ISO	UniProtKB:Q9WV48	9068941	PMID:10551867	UniProt	PMID:10551867 and REF_RGD_ID:8554584
Sstr2	Chinchilla	PDZ domain binding	enables	ISO	UniProtKB:Q9Y566	9068941	PMID:10551867	UniProt	PMID:10551867
Sstr2	Chinchilla	protein binding	enables	ISO	UniProtKB:P27986	9068941	PMID:16917505	IntAct	PMID:16917505
Sstr2	Chinchilla	protein binding	enables	ISO	UniProtKB:P35346	9068941	PMID:18653781	IntAct	PMID:18653781
Sstr2	Chinchilla	protein binding	enables	ISO	UniProtKB:P32745	9068941	PMID:22651821	IntAct	PMID:22651821
Sstr2	Chinchilla	protein binding	enables	ISO	UniProtKB:Q9Y566	9068941	PMID:10551867	UniProt	PMID:10551867
Sstr2	Chinchilla	protein heterodimerization activity	enables	ISO	SSTR2 (Sus scrofa)	9068941	PMID:24368669	AgBase	PMID:24368669
Sstr2	Chinchilla	somatostatin receptor activity		ISO	Sstr2 (Rattus norvegicus)	9068941		RGD	PMID:1374909 and REF_RGD_ID:70025
Sstr2	Chinchilla	somatostatin receptor activity	enables	ISO	Sstr2 (Mus musculus)	9068941	PMID:7929134	MGI	PMID:7929134
Sstr2	Chinchilla	somatostatin receptor activity	enables	ISO	Sstr2 (Mus musculus)	9068941	PMID:1346068 and PMID:7929134	MGI	PMID:1346068 and PMID:7929134

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

PMID:22301074	PMID:30032202

Sstr2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955478	60,489 - 90,209 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955478	61,126 - 123,806 (-)	NCBI	ChiLan1.0	ChiLan1.0

SSTR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	73,165,010 - 73,176,633 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	73,165,010 - 73,176,633 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	71,161,149 - 71,172,772 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	68,672,755 - 68,679,689 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	68,672,754 - 68,679,655	NCBI
Celera	17	67,744,235 - 67,751,169 (+)	NCBI		Celera
Cytogenetic Map	17	q25.1	NCBI
HuRef	17	66,570,255 - 66,577,187 (+)	NCBI		HuRef
CHM1_1	17	71,225,325 - 71,232,224 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	74,054,801 - 74,066,425 (+)	NCBI		T2T-CHM13v2.0

Sstr2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	113,510,153 - 113,516,854 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	113,510,168 - 113,516,854 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	113,619,327 - 113,626,028 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	113,619,342 - 113,626,028 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	113,485,571 - 113,486,950 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	113,435,574 - 113,441,985 (+)	NCBI		MGSCv36	mm8
Celera	11	125,379,798 - 125,381,177 (+)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	79.05	NCBI

Sstr2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	99,163,353 - 99,170,519 (+)	NCBI		GRCr8
mRatBN7.2	10	98,664,204 - 98,671,370 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	98,664,216 - 98,674,351 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	103,716,316 - 103,723,467 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	103,179,358 - 103,186,509 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	98,584,256 - 98,591,422 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	102,136,283 - 102,143,449 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	102,136,283 - 102,143,434 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	101,816,029 - 101,823,337 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	103,246,880 - 103,254,444 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	103,261,249 - 103,268,805 (+)	NCBI
Celera	10	97,271,562 - 97,278,691 (+)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

SSTR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	89,182,442 - 89,194,105 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	94,007,294 - 94,018,946 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	67,093,013 - 67,099,086 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	72,549,167 - 72,556,106 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	72,553,506 - 72,554,615 (+)	Ensembl	panpan1.1		panPan2

SSTR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	6,989,488 - 7,004,851 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	6,996,874 - 7,000,778 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	7,620,598 - 7,621,707 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	7,662,314 - 7,677,653 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	9	7,712,309 - 7,713,418 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	7,815,153 - 7,816,262 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	7,876,175 - 7,877,284 (-)	NCBI		UU_Cfam_GSD_1.0

Sstr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	7,552,830 - 7,558,761 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936655	1,051,447 - 1,052,556 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936655	1,050,835 - 1,056,609 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SSTR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	7,783,431 - 7,789,488 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	7,783,401 - 7,789,483 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	8,063,456 - 8,069,876 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SSTR2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	48,462,472 - 48,470,586 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	48,464,342 - 48,465,451 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	19,280,096 - 19,290,449 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Sstr2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624801	3,198,204 - 3,206,481 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624801	3,198,137 - 3,205,936 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005402090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005402091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_263680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_263681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_263682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_263683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01055730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01055731	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01055732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01034986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000014225 ⟹ ENSCLAP00000014068

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955478	60,489 - 90,209 (-)	Ensembl

RefSeq Acc Id:

XM_005402090 ⟹ XP_005402147

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955478	61,126 - 67,281 (-)	NCBI

Sequence:

show sequence

TGTGCCGAGGGGCTCTGGCCGGCCGGGCCAGTCCAAGCGGCGCAGCCACCCGAGCCCGCGCGCTCGCAAGGCCACTCGCCTCCAGGGCTCCAGTCCGCGGTGGGCGCTGGCGGTTTGCGCGCGAGCGG
AGAGGGGAGGGAGCCTGAGGGGCCGGGAGCCCGGGACGCCGAGCGTCAGGCACCCGCCAAGCTGCCGCGCTCCCTGGTACCCAGGTGGATAAGGGACAGCTACTGGGTGCTGGCGAGACCAGATAAGG
AACTGCCTCGGAAAACCAAGATGTTGCAGTGGATCCTTGGCCTCCAGGGCACACTGCAGTGCAAATAAGATCTCTGGGCTGGCTGGCTGTAGACTCAGAGGCAGAGCAAGCATGGAGATGGCGTACGA
GCACCTCAATGGGAGCCAGGCATGGCTGGCCCCTCCCTTTGACCTCAATGGCTCAGTGGTAGCAGCCAACAGCTCGAACCAGACAGAGCCATACTATGACATGACCAGCAATGCAGTACTCACATTCA
TATATTTTGTGGTCTGTATCATCGGGTTGTGCGGCAACACGCTTGTCATTTATGTCATCCTCCGCTACGCCAAGATGAAGACCATCACCAATATCTACATCCTCAACCTGGCCATTGCGGACGAGCTC
TTCATGCTAGGGCTCCCCTTCTTGGCCATGCAGGTGGCACTAGTCCACTGGCCCTTTGGCAAGGCCATCTGCCGGGTGGTCATGACTGTGGATGGCATCAATCAGTTCACCAGCATTTTCTGCTTGAC
AGTCATGAGCATTGACCGTTACCTGGCCGTGGTCCACCCCATCAAGTCGGCCAAGTGGAGGAGACCGAGGACAGCCAAGATGATCAACGTGGCTGTGTGGGGAGTTTCTCTGCTAGTCATCTTGCCTA
TCATGATATATGCTGGGCTTCGGAGCAACCAGTGGGGGAAAAGCAGCTGCACCATCAACTGGCCAGGTGAATCTGGGGCATGGTACACAGGGTTCATTATCTACACTTTCATCTTAGGGTTCCTGGTA
CCCCTCACCATCATTTGTCTCTGCTATCTGTTCATCATCATCAAAGTGAAGTCCTCTGGAATCCGAGTGGGTTCTTCCAAGAGGAAAAAATCTGAGAAGAAGGTCACTCGAATGGTGTCTATCGTGGT
GGCTGTCTTCATTTTCTGCTGGCTCCCCTTCTACATATTCAATGTCTCCTCCGTCTCTGTGGCCATCAATCCCACCCCAGCCCTTAAAGGCATGTTTGACTTTGTGGTGGTCCTTACTTATGCTAACA
GCTGTGCCAACCCTATCCTCTATGCCTTCTTATCTGACAACTTCAAGAAGAGCTTCCAGAATGTCCTGTGCTTGGTCAAGGTGGGTGGCACAGATGATGGGGAAAGGAGTGACAGCAAGCAGGATAAA
TCCCGGCTCAATGAGACCACAGAGACCCAGAGGACCCTCCTCAATGGAGACCTCCAGACCAGTATCTGAACCGCCTGGAAAACAAAAGCGCAGAGAAGCCAAGCTCTGCCTCTTGGCAATGAGCTCTA
TCCTTGTCCCCTCTTCCTCCTACCCATCACTCTGGCTTCTAGAATAAAGGATTGCTCAGCATGAGCCCAATTCAGAGAACAGGGCTCGAGCTGGTGTGATTGAATGATAATGTACCACATTGATTACC
TCCCCCTTACGGAGACATTTAAATCCAGGCAGACCATTCAAAGTCTGGAGAAAAGACGATCATGCCTGGGTGTGACTCTGAGAAATTCTAAGGCTCAACAAAAATAGAAAAAAAAATTACCTATGTGT
TTGTGTGCTTAAAAACCAATATGTAATCTTGAGTTCTGATATTTATACTTGTATTGCCCCTATCCTTTGTATAGTCGTTACCTTCCTTTTCTTCATTACATATGCAAGGAGCAAAGTCAACTGTGTAT
AGTGTACATGGACATTTACCACAATACGGAACTAAAGAAATGGACTTAGCATGAAGCCAACAAAGTGTAAGCTTCAGGGATCTCCCTAGCAGTGTGGTCATGTGGTTATGATTTTGTTTTTAAAAAAA
AAACTGTGAAAGTAAAATA

hide sequence

RefSeq Acc Id:

XM_005402091 ⟹ XP_005402148

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955478	61,126 - 123,806 (-)	NCBI

Sequence:

show sequence

CAGCAGATCAAGAGAGTGACACATCATTCTCTAGGTCACTGGCCCTCAAACCACAGTTTCCATC
AGAATCACCCCGAAGATGTCAAACCCAGAGGACCATGTCATTCTAGGAAACTCAAAATATTTAGGAACCCAGCCAGAGCACAAGCTGAGCAGAAAAAGAGCCTGTGGTCAGAGTGGCCATGGATTGAA
AGGTACAAGGACAGGCTTCTTCGATGTTGCAGTGGATCCTTGGCCTCCAGGGCACACTGCAGTGCAAATAAGATCTCTGGGCTGGCTGGCTGTAGACTCAGAGGCAGAGCAAGCATGGAGATGGCGTA
CGAGCACCTCAATGGGAGCCAGGCATGGCTGGCCCCTCCCTTTGACCTCAATGGCTCAGTGGTAGCAGCCAACAGCTCGAACCAGACAGAGCCATACTATGACATGACCAGCAATGCAGTACTCACAT
TCATATATTTTGTGGTCTGTATCATCGGGTTGTGCGGCAACACGCTTGTCATTTATGTCATCCTCCGCTACGCCAAGATGAAGACCATCACCAATATCTACATCCTCAACCTGGCCATTGCGGACGAG
CTCTTCATGCTAGGGCTCCCCTTCTTGGCCATGCAGGTGGCACTAGTCCACTGGCCCTTTGGCAAGGCCATCTGCCGGGTGGTCATGACTGTGGATGGCATCAATCAGTTCACCAGCATTTTCTGCTT
GACAGTCATGAGCATTGACCGTTACCTGGCCGTGGTCCACCCCATCAAGTCGGCCAAGTGGAGGAGACCGAGGACAGCCAAGATGATCAACGTGGCTGTGTGGGGAGTTTCTCTGCTAGTCATCTTGC
CTATCATGATATATGCTGGGCTTCGGAGCAACCAGTGGGGGAAAAGCAGCTGCACCATCAACTGGCCAGGTGAATCTGGGGCATGGTACACAGGGTTCATTATCTACACTTTCATCTTAGGGTTCCTG
GTACCCCTCACCATCATTTGTCTCTGCTATCTGTTCATCATCATCAAAGTGAAGTCCTCTGGAATCCGAGTGGGTTCTTCCAAGAGGAAAAAATCTGAGAAGAAGGTCACTCGAATGGTGTCTATCGT
GGTGGCTGTCTTCATTTTCTGCTGGCTCCCCTTCTACATATTCAATGTCTCCTCCGTCTCTGTGGCCATCAATCCCACCCCAGCCCTTAAAGGCATGTTTGACTTTGTGGTGGTCCTTACTTATGCTA
ACAGCTGTGCCAACCCTATCCTCTATGCCTTCTTATCTGACAACTTCAAGAAGAGCTTCCAGAATGTCCTGTGCTTGGTCAAGGTGGGTGGCACAGATGATGGGGAAAGGAGTGACAGCAAGCAGGAT
AAATCCCGGCTCAATGAGACCACAGAGACCCAGAGGACCCTCCTCAATGGAGACCTCCAGACCAGTATCTGAACCGCCTGGAAAACAAAAGCGCAGAGAAGCCAAGCTCTGCCTCTTGGCAATGAGCT
CTATCCTTGTCCCCTCTTCCTCCTACCCATCACTCTGGCTTCTAGAATAAAGGATTGCTCAGCATGAGCCCAATTCAGAGAACAGGGCTCGAGCTGGTGTGATTGAATGATAATGTACCACATTGATT
ACCTCCCCCTTACGGAGACATTTAAATCCAGGCAGACCATTCAAAGTCTGGAGAAAAGACGATCATGCCTGGGTGTGACTCTGAGAAATTCTAAGGCTCAACAAAAATAGAAAAAAAAATTACCTATG
TGTTTGTGTGCTTAAAAACCAATATGTAATCTTGAGTTCTGATATTTATACTTGTATTGCCCCTATCCTTTGTATAGTCGTTACCTTCCTTTTCTTCATTACATATGCAAGGAGCAAAGTCAACTGTG
TATAGTGTACATGGACATTTACCACAATACGGAACTAAAGAAATGGACTTAGCATGAAGCCAACAAAGTGTAAGCTTCAGGGATCTCCCTAGCAGTGTGGTCATGTGGTTATGATTTTGTTTTTAAAA
AAAAAACTGTGAAAGTAAAATA

hide sequence

RefSeq Acc Id:

XR_263680

Type:

NON-CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955478	120,709 - 123,416 (-)	NCBI

Sequence:

show sequence

AAAATATTTAGGAACCCAGCCAGAGCACAAGCTGAGCAGAAAAAGAGCCTGTGGTCAGAGTGGC
CATGGATTGAAAGGTACAAGGACAGGCTTCTTCGCATCTACTCTGTCCATCTTTGGCGTGTGGCCCACCAGGGAGCTGTGACTTCCCTCGCCCACACTGTCTCACCTGCCCTTCCGGAAGTCTGGCCC
TGGACCTGGCCTGAAGACTGAGATGAACGTTTCACCCCAGGCCAGCCAGCTCCTTCTCTCCGCGGTGTGGCTAAGAAGCCCAGCCAGAACTGGTTCTCAGAGTTGTGGCTGGGTCATAGAAGCGAAAG
CAACAGGTAGTTCCTAGGTGTGTTATTAAAATGTAGGGGTTTGCTA

hide sequence

RefSeq Acc Id:

XR_263681

Type:

NON-CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955478	96,478 - 123,416 (-)	NCBI

Sequence:

show sequence

AAAATATTTAGGAACCCAGCCAGAGCACAAGCTGAGCAGAAAAAGAGCCTGTGGTCAGAGTGGC
CATGGATTGAAAGGTACAAGGACAGGCTTCTTCGGAAACAAACTTCAGTTCTTGACTGGGCACATGGCCACCCCAAGCAAAGACATTTTCCAGGTACTCTTTGCAGCTGTACAAGATCATGTGCTTGA
GTTCTAACCCAAAAGTGTGCCACAGTGAGGAAGCATGTTCTTCTTTGTTCCTCTTTCCTGCTGGCATCAATATGAAATAACAGCTGTCATAGCAGCCGGCCTTTTCCACCACATAGGAACTTGAGGAT
GAGAGCAACCTCCAATAAAACAGTAA

hide sequence

RefSeq Acc Id:

XR_263682

Type:

NON-CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955478	92,166 - 123,416 (-)	NCBI

Sequence:

show sequence

AAAATATTTAGGAACCCAGCCAGAGCACAAGCTGAGCAGAAAAAGAGCCTGTGGTCAGAGTGGC
CATGGATTGAAAGGTACAAGGACAGGCTTCTTCGCCTAGGGCACACTTTCCTAGCGCCAGATGGTCAGCAAGATGAAGCAGACATGACACCCAGGTCATCTGTTTGCCACCACTCCCCCAAGCAGTTC
ACCTCATCCTGGATGGAGCCCCAACGAGCTGTGCCCTATTTCAACCCTGGATCCTGGAAAAGCAGCCCCATTCCAGGACTTTCCATGGTGCTGGACCCTTCCAGGAGCCTGGAGATAGTAGCATTCTC
TTGGAATGTCTGGCGTTGCCTGCTGTCTCTCCTTGGGCTCCCTTGTGACCAGAGAAAAGGACCAAGGGCATGGGAAAGGGGCTGGGCTTTGGAAGGAAGTGGCTCTTACGTGTTCTCACCACATTCTG
ATATGAGGACTATGTGAGGTGACGGATGTGTGCATTAATTTGGTTGTGGTAACCATTTCATGATGTGGCAGGTGTGACAAATATATAGTGCATATTCACATTTTTTTAATTTACTGCAGTAAAAGGT

hide sequence

RefSeq Acc Id:

XR_263683

Type:

NON-CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955478	102,109 - 123,416 (-)	NCBI

Sequence:

show sequence

AAAATATTTAGGAACCCAGCCAGAGCACAAGCTGAGCAGAAAAAGAGCCTGTGGTCAGAGTGGCCATGGATTGAAAGGTACAAGGACAGGCTTCTTCGGTGGAATACAGGAGAAATTCAGCCCTTTAA
GGTCAAAGATAAGGGAGAGAACTGAGCTGCTAGG

hide sequence


Protein RefSeqs	XP_005402147	(Get FASTA)	NCBI Sequence Viewer
	XP_005402148	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000014068
	ENSCLAP00000014068.1

RefSeq Acc Id:

XP_005402148 ⟸ XM_005402091

- UniProtKB:

A0A8C2VKQ9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEMAYEHLNGSQAWLAPPFDLNGSVVAANSSNQTEPYYDMTSNAVLTFIYFVVCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGINQFT
SIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMINVAVWGVSLLVILPIMIYAGLRSNQWGKSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTR
MVSIVVAVFIFCWLPFYIFNVSSVSVAINPTPALKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVGGTDDGERSDSKQDKSRLNETTETQRTLLNGDLQTSI

hide sequence

RefSeq Acc Id:

XP_005402147 ⟸ XM_005402090

- UniProtKB:

A0A8C2VKQ9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEMAYEHLNGSQAWLAPPFDLNGSVVAANSSNQTEPYYDMTSNAVLTFIYFVVCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWPFGKAICRVVMTVDGINQFT
SIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMINVAVWGVSLLVILPIMIYAGLRSNQWGKSSCTINWPGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRKKSEKKVTR
MVSIVVAVFIFCWLPFYIFNVSSVSVAINPTPALKGMFDFVVVLTYANSCANPILYAFLSDNFKKSFQNVLCLVKVGGTDDGERSDSKQDKSRLNETTETQRTLLNGDLQTSI

hide sequence

Ensembl Acc Id:

ENSCLAP00000014068 ⟸ ENSCLAT00000014225

Protein Domains

G-protein coupled receptors family 1 profile

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000009711	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000014225	ENTREZGENE
	ENSCLAT00000014225.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	Somatstn_rcpt	UniProtKB/TrEMBL
	Somatstn_rcpt_2	UniProtKB/TrEMBL
NCBI Gene	Sstr2	ENTREZGENE
PANTHER	NEUROPEPTIDES RECEPTOR	UniProtKB/TrEMBL
	SOMATOSTATIN RECEPTOR TYPE 2	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	SOMATOSTATNR	UniProtKB/TrEMBL
	SOMATOSTTN2R	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
SMART	7TM_GPCR_Srsx	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A8C2VKQ9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - CTD