Mvp (major vault protein) - Rat Genome Database

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Gene: Mvp (major vault protein) Chinchilla lanigera
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Symbol: Mvp
Name: major vault protein
RGD ID: 8903893
Description: ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN cell population proliferation (ortholog); ERBB signaling pathway (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554937,113,319 - 7,143,582 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_0049554937,113,194 - 7,141,944 (-)NCBIChiLan1.0ChiLan1.0
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Mvp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554937,113,319 - 7,143,582 (-)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_0049554937,113,194 - 7,141,944 (-)NCBIChiLan1.0ChiLan1.0
MVP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381629,820,394 - 29,848,039 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1629,820,394 - 29,848,039 (+)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh371629,831,715 - 29,859,360 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361629,731,591 - 29,766,842 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341629,739,288 - 29,766,843NCBI
Celera1672,936,886 - 72,964,474 (-)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1627,492,353 - 27,519,952 (+)NCBIHuRef
CHM1_11631,047,524 - 31,075,150 (+)NCBICHM1_1
T2T-CHM13v2.01630,102,554 - 30,130,675 (+)NCBIT2T-CHM13v2.0
Mvp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397126,586,036 - 126,613,729 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7126,586,032 - 126,613,793 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm387126,986,860 - 127,014,594 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7126,986,860 - 127,014,621 (-)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv377134,130,374 - 134,158,108 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv367126,778,014 - 126,805,742 (-)NCBIMGSCv36mm8
Celera7126,835,060 - 126,862,722 (-)NCBICelera
Cytogenetic Map7F3NCBI
cM Map769.26NCBI
Mvp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,025,259 - 191,052,866 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1191,025,268 - 191,052,873 (-)EnsemblGRCr8
mRatBN7.21181,594,734 - 181,622,336 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1181,594,734 - 181,622,380 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1189,946,088 - 189,973,678 (-)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01197,132,171 - 197,159,761 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01189,799,632 - 189,827,156 (-)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1190,337,746 - 190,365,336 (-)NCBI
Lyon_Normotensive1195,341,225 - 195,368,753 (-)NCBI
Lyon_Hypertensive1192,008,748 - 192,036,282 (-)NCBI
F344_StmMcwi1190,297,539 - 190,325,134 (-)NCBI
Rnor_6.01198,420,813 - 198,448,612 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,420,806 - 198,450,047 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.01205,401,190 - 205,428,854 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41186,164,811 - 186,192,802 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1179,249,451 - 179,276,973 (-)NCBICelera
RGSC_v3.11186,314,691 - 186,342,683 (-)NCBI
Cytogenetic Map1q37NCBI
MVP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21830,569,361 - 30,597,756 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11635,628,134 - 35,656,003 (-)NCBINHGRI_mPanPan1
PanPan1.11630,190,929 - 30,217,971 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1630,190,090 - 30,219,070 (+)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
MVP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,879,687 - 17,903,184 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,873,521 - 17,903,184 (+)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha619,456,681 - 19,479,984 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0618,013,316 - 18,036,825 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl618,013,502 - 18,036,825 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,813,002 - 17,836,311 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,728,697 - 17,751,998 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0618,043,991 - 18,067,316 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Mvp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap110124,542,168 - 124,571,618 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_024409344124,501,044 - 124,512,454 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650112,599,036 - 12,655,910 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493650112,598,907 - 12,610,306 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MVP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl318,057,177 - 18,081,155 (+)EnsemblSscrofa11.1 EnsemblsusScr11Sscrofa11.1
Sscrofa11.1318,056,548 - 18,081,169 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,509,107 - 18,534,192 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MVP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap1527,082,754 - 27,110,935 (-)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_0236660682,694,565 - 2,723,262 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.1526,805,070 - 26,833,043 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl526,801,753 - 26,833,199 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Mvp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478213,363,121 - 13,386,961 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_00462478213,363,000 - 13,387,086 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl2313,198,172 - 13,222,425 (-)Ensembl
Mvp
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1274,878,686 - 74,906,295 (+)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000016716   ⟹   ENSCLAP00000016552
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554937,113,319 - 7,143,582 (-)Ensembl
Ensembl Acc Id: ENSCLAT00000016717   ⟹   ENSCLAP00000016553
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554937,113,319 - 7,143,582 (-)Ensembl
RefSeq Acc Id: XM_005405235   ⟹   XP_005405292
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554937,113,194 - 7,141,944 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013504773   ⟹   XP_013360227
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554937,113,194 - 7,141,944 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005405292 (Get FASTA)   NCBI Sequence Viewer  
  XP_013360227 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000016552.1
  ENSCLAP00000016553
  ENSCLAP00000016553.1
RefSeq Acc Id: XP_005405292   ⟸   XM_005405235
- Peptide Label: isoform X2
- UniProtKB: A0A8C2VJP5 (UniProtKB/TrEMBL),   A0A8C2YQU3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013360227   ⟸   XM_013504773
- Peptide Label: isoform X1
- UniProtKB: A0A8C2YQU3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000016552   ⟸   ENSCLAT00000016716
Ensembl Acc Id: ENSCLAP00000016553   ⟸   ENSCLAT00000016717
Protein Domains
Major vault protein repeat   Major vault protein shoulder


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000011381 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000016716.1 UniProtKB/TrEMBL
  ENSCLAT00000016717 ENTREZGENE
  ENSCLAT00000016717.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.30.550 UniProtKB/TrEMBL
  2.30.30.560 UniProtKB/TrEMBL
  2.30.30.570 UniProtKB/TrEMBL
  2.30.30.620 UniProtKB/TrEMBL
  3.30.479.30 UniProtKB/TrEMBL
  6.10.250.720 UniProtKB/TrEMBL
  6.20.380.10 UniProtKB/TrEMBL
InterPro Band_7/SPFH_dom_sf UniProtKB/TrEMBL
  MVP UniProtKB/TrEMBL
  MVP_rep_dom UniProtKB/TrEMBL
  MVP_rep_sf UniProtKB/TrEMBL
  MVP_shoulder UniProtKB/TrEMBL
  Vault_2 UniProtKB/TrEMBL
  Vault_2_sf UniProtKB/TrEMBL
  Vault_3 UniProtKB/TrEMBL
  Vault_4 UniProtKB/TrEMBL
  Vault_N UniProtKB/TrEMBL
NCBI Gene Mvp ENTREZGENE
PANTHER MAJOR VAULT PROTEIN UniProtKB/TrEMBL
  PTHR14165 UniProtKB/TrEMBL
Pfam MVP_shoulder UniProtKB/TrEMBL
  Vault UniProtKB/TrEMBL
  Vault_2 UniProtKB/TrEMBL
  Vault_3 UniProtKB/TrEMBL
  Vault_4 UniProtKB/TrEMBL
PROSITE MVP UniProtKB/TrEMBL
UniProt A0A8C2VJP5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2YQU3 ENTREZGENE, UniProtKB/TrEMBL