Rras (RAS related) - Rat Genome Database

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Gene: Rras (RAS related) Chinchilla lanigera
Analyze
Symbol: Rras
Name: RAS related
RGD ID: 8781350
Description: ENCODES a protein that exhibits GDP binding (ortholog); GTPase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell migration (ortholog); face morphogenesis (ortholog); leukocyte differentiation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH COVID-19 (ortholog); developmental and epileptic encephalopathy 12 (ortholog); juvenile myelomonocytic leukemia (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ras-related protein R-Ras; related RAS viral (r-ras) oncogene homolog
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555591,244,658 - 1,248,774 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555591,244,658 - 1,248,774 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RrasChinchillaCOVID-19  ISORRAS (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RrasChinchilladevelopmental and epileptic encephalopathy 12  ISORRAS (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 12ClinVarPMID:28492532
RrasChinchillaNoonan syndrome  ISORRAS (Homo sapiens)8554872ClinVar more ...ClinVarPMID:17576681 more ...
RrasChinchillaNoonan syndrome  ISORRAS (Homo sapiens)8554872ClinVar more ...ClinVarPMID:17576681 more ...
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RrasChinchillajuvenile myelomonocytic leukemia  ISORRAS (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:26457647
RrasChinchillaProstatic Neoplasms  ISORRAS (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:17013881


Biological Process
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Molecular Function
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Imported Annotations - PID (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
RrasChinchillaephrin - ephrin receptor bidirectional signaling axis  ISORRAS (Homo sapiens)9068941 PIDPID:200052

#
Reference Title
Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
PMID:22301074   PMID:30032202  



Rras
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555591,244,658 - 1,248,774 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555591,244,658 - 1,248,774 (+)NCBIChiLan1.0ChiLan1.0
RRAS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381949,635,292 - 49,640,143 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1949,635,292 - 49,640,143 (-)EnsemblGRCh38hg38GRCh38
GRCh371950,138,549 - 50,143,400 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361954,830,364 - 54,835,212 (-)NCBINCBI36Build 36hg18NCBI36
Build 341954,830,363 - 54,835,212NCBI
Celera1947,007,883 - 47,012,731 (-)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1946,515,612 - 46,520,460 (-)NCBIHuRef
CHM1_11950,140,333 - 50,145,181 (-)NCBICHM1_1
T2T-CHM13v2.01952,635,325 - 52,640,178 (-)NCBIT2T-CHM13v2.0
Rras
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39744,665,686 - 44,671,070 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl744,667,385 - 44,671,071 (+)EnsemblGRCm39 Ensembl
GRCm38745,017,942 - 45,021,646 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,017,961 - 45,021,647 (+)EnsemblGRCm38mm10GRCm38
MGSCv37752,273,377 - 52,277,014 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36744,886,049 - 44,889,686 (+)NCBIMGSCv36mm8
Celera740,469,567 - 40,473,202 (+)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.08NCBI
Rras
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81104,637,061 - 104,640,841 (+)NCBIGRCr8
mRatBN7.2195,500,582 - 95,504,362 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl195,500,566 - 95,504,357 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1100,885,980 - 100,889,760 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01109,358,646 - 109,362,426 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01102,649,041 - 102,652,821 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01101,012,822 - 101,016,720 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,012,822 - 101,016,720 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,077,775 - 102,081,673 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4195,490,730 - 95,495,462 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1195,568,807 - 95,573,563 (+)NCBI
Celera189,761,925 - 89,765,705 (+)NCBICelera
Cytogenetic Map1q22NCBI
RRAS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22055,752,559 - 55,757,421 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11957,673,302 - 57,678,161 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01946,649,892 - 46,654,754 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11955,569,465 - 55,571,444 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1955,569,749 - 55,573,721 (-)Ensemblpanpan1.1panPan2
RRAS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11106,895,413 - 106,899,265 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1106,895,408 - 106,899,222 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1106,479,192 - 106,483,049 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01107,416,876 - 107,420,728 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1107,416,878 - 107,420,685 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,089,085 - 107,092,934 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01106,731,174 - 106,735,018 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01107,572,304 - 107,576,157 (+)NCBIUU_Cfam_GSD_1.0
Rras
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934921,838,491 - 21,842,354 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366643,456,290 - 3,460,788 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366643,456,681 - 3,460,537 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RRAS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl654,680,600 - 54,684,719 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1654,680,596 - 54,684,714 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2650,409,620 - 50,413,729 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RRAS
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1642,810,411 - 42,815,504 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl642,810,339 - 42,815,479 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607322,754,154 - 22,759,266 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rras
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248324,633,326 - 4,637,938 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248324,632,812 - 4,637,938 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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RefSeq Transcripts XM_005412862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AGCD01073638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GBDF01188765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCLAT00000007098   ⟹   ENSCLAP00000006986
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555591,244,658 - 1,248,774 (+)Ensembl
RefSeq Acc Id: XM_005412862   ⟹   XP_005412919
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555591,244,658 - 1,248,774 (+)NCBI
Sequence:
Protein RefSeqs XP_005412919 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000006986
  ENSCLAP00000006986.1
RefSeq Acc Id: XP_005412919   ⟸   XM_005412862
- UniProtKB: A0A8C2V3A8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000006986   ⟸   ENSCLAT00000007098



1 to 21 of 21 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCLAG00000004920 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000007098 ENTREZGENE
  ENSCLAT00000007098.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
  Small_GTPase_Ras-type UniProtKB/TrEMBL
NCBI Gene Rras ENTREZGENE
PANTHER PTHR24070 UniProtKB/TrEMBL
Pfam Ras UniProtKB/TrEMBL
PRINTS RASTRNSFRMNG UniProtKB/TrEMBL
PROSITE RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
SMART RAB UniProtKB/TrEMBL
  RAN UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8C2V3A8 ENTREZGENE, UniProtKB/TrEMBL
1 to 21 of 21 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-08-08 Rras  RAS related    related RAS viral (r-ras) oncogene homolog  Symbol and/or name change 5135510 APPROVED