Map7 (microtubule associated protein 7) - Rat Genome Database

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Gene: Map7 (microtubule associated protein 7) Chinchilla lanigera
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Symbol: Map7
Name: microtubule associated protein 7
RGD ID: 8776674
Description: ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell population proliferation (ortholog); fertilization (ortholog); ASSOCIATED WITH Familial Behcet-Like Autoinflammatory Syndrome (ortholog); immunodeficiency 27A (ortholog); Peroxisome biogenesis disorder 9B (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ensconsin; microtubule-associated protein 7
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955439404,212 - 548,732 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Map7ChinchillaFamilial Behcet-Like Autoinflammatory Syndrome  ISORGD:13188868554872ClinVar Annotator: match by term: Autoinflammatory syndrome, familial, Behcet-likeClinVarPMID:25741868
Map7Chinchillaimmunodeficiency 27A  ISORGD:13188868554872ClinVar Annotator: match by term: Immunodeficiency 27AClinVarPMID:28492532
Map7ChinchillaPeroxisome biogenesis disorder 9B  ISORGD:13188868554872ClinVar Annotator: match by term: Peroxisome biogenesis disorder 9BClinVarPMID:12325024|PMID:12522768|PMID:20301447|PMID:28492532


Biological Process
1 to 16 of 16 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Map7Chinchillacell morphogenesis acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7Chinchillacell population proliferation acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7Chinchillafertilization acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7Chinchillagerm cell development acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7Chinchillaglycosphingolipid metabolic process acts_upstream_of_or_withinISOMGI:18898499068941 PMID:18308723MGIPMID:18308723
Map7Chinchillahomeostasis of number of cells acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7ChinchillaLeydig cell differentiation acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7Chinchillamicrotubule bundle formation acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7Chinchillanucleus organization acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7Chinchillaorgan growth acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7Chinchillaprotein localization to plasma membrane involved_inISORGD:13188879068941 PMID:14517216BHF-UCLPMID:14517216
Map7Chinchillaresponse to osmotic stress involved_inISORGD:13188879068941 PMID:14517216BHF-UCLPMID:14517216
Map7Chinchillaresponse to osmotic stress acts_upstream_of_or_withinISOPR:Q9EPK89068941 PMID:14517216MGIPMID:14517216
Map7Chinchillaresponse to retinoic acid acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7ChinchillaSertoli cell development acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
Map7Chinchillaspermatogenesis acts_upstream_of_or_withinISOMGI:21482219068941 PMID:10837026MGIPMID:10837026
1 to 16 of 16 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Map7Chinchillaaxon located_inISORGD:13088669068941PMID:28426968ARUK-UCLPMID:28426968|REF_RGD_ID:13514087
Map7Chinchillacytosol located_inISORGD:13188869068941 HPAGO_REF:0000052
Map7Chinchillamicrotubule cytoskeleton located_inISORGD:13188869068941 HPAGO_REF:0000052
Map7Chinchillaplasma membrane located_inISORGD:13188879068941 PMID:14517216MGIPMID:14517216

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Map7Chinchillaprotein binding enablesISOUniProtKB:Q6NSX1|UniProtKB:Q8N3C7|UniProtKB:Q8NC269068941 PMID:32296183IntActPMID:32296183
Map7Chinchillaprotein binding enablesISOPR:Q9EPK89068941 PMID:14517216MGIPMID:14517216
Map7Chinchillaprotein binding enablesISOUniProtKB:A0A0H3JP21|UniProtKB:Q8XBX89068941 PMID:27018634IntActPMID:27018634
Map7Chinchillaprotein binding enablesISOUniProtKB:A0A0H3JP21|UniProtKB:P26641|UniProtKB:Q8XBX89068941 PMID:27018634AgBasePMID:27018634
Map7Chinchillasignaling receptor binding enablesISOUniProtKB:Q9EPK89068941 PMID:14517216BHF-UCLPMID:14517216


#
Reference Title
Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
PMID:22301074   PMID:30032202  



Map7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955439404,212 - 548,732 (+)NCBIChiLan1.0ChiLan1.0
MAP7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386136,342,734 - 136,550,422 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6136,342,281 - 136,550,819 (-)EnsemblGRCh38hg38GRCh38
GRCh376136,663,872 - 136,871,560 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366136,705,565 - 136,913,485 (-)NCBINCBI36Build 36hg18NCBI36
Build 346136,705,565 - 136,913,485NCBI
Celera6137,404,328 - 137,612,277 (-)NCBICelera
Cytogenetic Map6q23.3NCBI
HuRef6134,227,897 - 134,436,269 (-)NCBIHuRef
CHM1_16136,925,972 - 137,134,594 (-)NCBICHM1_1
T2T-CHM13v2.06137,530,867 - 137,738,614 (-)NCBIT2T-CHM13v2.0
Map7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391020,024,666 - 20,157,336 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1020,024,217 - 20,157,336 (+)EnsemblGRCm39 Ensembl
GRCm381020,148,920 - 20,281,590 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1020,148,471 - 20,281,590 (+)EnsemblGRCm38mm10GRCm38
MGSCv371019,868,726 - 20,001,396 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361019,838,430 - 19,970,122 (+)NCBIMGSCv36mm8
Celera1020,035,994 - 20,170,438 (+)NCBICelera
Cytogenetic Map10A3NCBI
cM Map109.75NCBI
Map7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8116,730,000 - 16,857,173 (+)NCBIGRCr8
mRatBN7.2114,910,433 - 15,037,574 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl114,910,551 - 15,037,574 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx114,664,530 - 14,792,774 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0120,666,457 - 20,794,703 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0114,890,419 - 15,017,466 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0115,620,665 - 15,748,203 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl115,620,653 - 15,748,203 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0117,189,224 - 17,293,867 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4115,440,422 - 15,553,260 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1115,505,838 - 15,553,312 (+)NCBI
Celera113,364,562 - 13,469,230 (+)NCBICelera
Cytogenetic Map1p12NCBI
MAP7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25156,309,178 - 156,520,010 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16154,207,905 - 154,417,231 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06134,102,927 - 134,312,296 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16138,193,074 - 138,401,302 (-)NCBIpanpan1.1PanPan1.1panPan2
MAP7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1128,933,422 - 29,101,944 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl128,934,761 - 29,101,896 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha129,812,265 - 29,984,694 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0129,089,524 - 29,262,570 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl129,089,108 - 29,262,496 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1128,975,666 - 29,148,139 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0128,860,490 - 29,033,011 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0129,159,126 - 29,332,118 (-)NCBIUU_Cfam_GSD_1.0
Map7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946124,031,925 - 124,178,791 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365603,816,209 - 3,872,488 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365603,811,021 - 3,958,007 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl127,606,036 - 27,782,747 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1127,606,021 - 27,782,754 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2131,195,099 - 31,237,583 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAP7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11336,863,546 - 37,073,861 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1336,888,942 - 37,075,818 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660409,047,411 - 9,259,093 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248861,216,878 - 1,360,123 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248861,194,440 - 1,359,644 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.






RefSeq Acc Id: XM_005390465   ⟹   XP_005390522
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955439404,231 - 548,732 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005390466   ⟹   XP_005390523
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955439404,271 - 548,732 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005390468   ⟹   XP_005390525
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955439404,212 - 548,732 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005390469   ⟹   XP_005390526
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955439404,267 - 548,732 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005390470   ⟹   XP_005390527
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955439470,886 - 548,732 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013517379   ⟹   XP_013372833
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_004955439477,859 - 548,732 (+)NCBI
Sequence:
Protein RefSeqs XP_005390522 (Get FASTA)   NCBI Sequence Viewer  
  XP_005390523 (Get FASTA)   NCBI Sequence Viewer  
  XP_005390525 (Get FASTA)   NCBI Sequence Viewer  
  XP_005390526 (Get FASTA)   NCBI Sequence Viewer  
  XP_005390527 (Get FASTA)   NCBI Sequence Viewer  
  XP_013372833 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005390525   ⟸   XM_005390468
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005390522   ⟸   XM_005390465
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005390526   ⟸   XM_005390469
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_005390523   ⟸   XM_005390466
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005390527   ⟸   XM_005390470
- Peptide Label: isoform X5
- Sequence:



Database
Acc Id
Source(s)
NCBI Gene Map7 ENTREZGENE


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-16 Map7  microtubule associated protein 7    microtubule-associated protein 7  Symbol and/or name change 5135510 APPROVED