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Gene: Creld1 (cysteine rich with EGF like domains 1) Chinchilla lanigera

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Symbol:

Creld1

Name:

cysteine rich with EGF like domains 1

RGD ID:

8744909

Description:

ASSOCIATED WITH Atrioventricular Septal Defect 2 (ortholog); Candidiasis, Familial, 9 (ortholog); Congenital Heart Defects, Multiple Types, 4 (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cysteine-rich with EGF-like domain protein 1; cysteine-rich with EGF-like domains 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955561	1,423,405 - 1,433,314 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955561	1,423,229 - 1,430,679 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Creld1	Chinchilla	heart septal defect	susceptibility	ISO	CRELD1 (Homo sapiens)	9068941	Atrioventricular septal defect and DNA:missense mutations	RGD	PMID:12632326 and REF_RGD_ID:1600967

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Creld1	Chinchilla	Atrioventricular Septal Defect 2		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:11376440 more ...
Creld1	Chinchilla	Candidiasis, Familial, 9		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Candidiasis more ...	ClinVar	PMID:25741868 and PMID:28492532
Creld1	Chinchilla	Congenital Heart Defects, Multiple Types, 4		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital heart defects more ...	ClinVar
Creld1	Chinchilla	genetic disease		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868 more ...
Creld1	Chinchilla	Jeffries-Lakhani Neurodevelopmental Syndrome		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Jeffries-Lakhani neurodevelopmental syndrome	ClinVar	PMID:25741868 more ...
Creld1	Chinchilla	long QT syndrome		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Long QT syndrome	ClinVar	PMID:28492532
Creld1	Chinchilla	myoclonic-atonic epilepsy		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Generalized myoclonic-atonic seizure	ClinVar	PMID:25865495 more ...
Creld1	Chinchilla	Neurodevelopmental Disorders		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868
Creld1	Chinchilla	Partial Atrioventricular Septal Defect, with Heterotaxy Syndrome		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Atrioventricular septal defect more ...	ClinVar	PMID:12632326 more ...
Creld1	Chinchilla	severe congenital neutropenia 6		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autosomal recessive severe congenital neutropenia due to JAGN1 deficiency	ClinVar	PMID:28492532
Creld1	Chinchilla	tetralogy of Fallot		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Tetralogy of Fallot	ClinVar	PMID:25741868 and PMID:28492532
Creld1	Chinchilla	Ventricular Septal Defect 1		ISO	CRELD1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Ventricular septal defect 1	ClinVar

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Creld1	Chinchilla	Atrioventricular Septal Defect 2		ISO	CRELD1 (Homo sapiens)	7240710		OMIM
Creld1	Chinchilla	Jeffries-Lakhani Neurodevelopmental Syndrome		ISO	CRELD1 (Homo sapiens)	7240710		OMIM

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Creld1	Chinchilla	glutamatergic synapse	is_active_in	ISO	Creld1 (Mus musculus)	9068941	PMID:31171447	SynGO	PMID:31171447
Creld1	Chinchilla	synapse	is_active_in	ISO	Creld1 (Mus musculus)	9068941	PMID:31171447	SynGO	PMID:31171447

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Creld1	Chinchilla	protein binding	enables	ISO	UniProtKB:P35348-1	9068941	PMID:20508391	IntAct	PMID:20508391
Creld1	Chinchilla	protein binding	enables	ISO	UniProtKB:P19404 and UniProtKB:Q8WXH2	9068941	PMID:32814053	IntAct	PMID:32814053

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline

PMID:22301074

Creld1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955561	1,423,405 - 1,433,314 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955561	1,423,229 - 1,430,679 (+)	NCBI	ChiLan1.0	ChiLan1.0

CRELD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	9,933,834 - 9,945,406 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	9,933,793 - 9,945,413 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	9,975,518 - 9,987,090 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	9,950,506 - 9,962,090 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	9,950,789 - 9,961,712	NCBI
Celera	3	9,910,976 - 9,922,541 (+)	NCBI		Celera
Cytogenetic Map	3	p25.3	NCBI
HuRef	3	9,911,848 - 9,923,428 (+)	NCBI		HuRef
CHM1_1	3	9,925,647 - 9,937,249 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	9,925,824 - 9,937,392 (+)	NCBI		T2T-CHM13v2.0

Creld1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	113,460,317 - 113,470,304 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	113,460,258 - 113,470,304 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	113,483,356 - 113,493,343 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	113,483,297 - 113,493,343 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	113,433,563 - 113,443,332 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	113,449,346 - 113,459,115 (+)	NCBI		MGSCv36	mm8
Celera	6	115,310,530 - 115,320,300 (+)	NCBI		Celera
Cytogenetic Map	6	E3	NCBI
cM Map	6	52.77	NCBI

Creld1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	148,187,510 - 148,197,120 (+)	NCBI		GRCr8
mRatBN7.2	4	146,631,883 - 146,641,493 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	146,631,883 - 146,641,499 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	152,015,833 - 152,025,441 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	147,796,674 - 147,806,282 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	146,418,959 - 146,428,548 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	145,440,284 - 145,449,894 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	145,440,114 - 145,449,892 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	208,737,312 - 208,747,193 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	149,375,373 - 149,384,983 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	149,620,213 - 149,629,820 (+)	NCBI
Celera	4	135,187,799 - 135,197,409 (+)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

CRELD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	9,937,799 - 9,949,353 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	9,942,600 - 9,954,112 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	9,878,265 - 9,889,826 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	10,226,983 - 10,238,210 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

CRELD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	8,333,911 - 8,342,429 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	8,367,586 - 8,376,111 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	8,363,188 - 8,371,703 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	8,363,188 - 8,371,683 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	8,085,492 - 8,094,013 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	8,430,988 - 8,439,523 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	8,404,093 - 8,412,604 (-)	NCBI		UU_Cfam_GSD_1.0

Creld1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404942	15,642,488 - 15,651,683 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936602	3,255,227 - 3,267,187 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936602	3,258,029 - 3,267,231 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CRELD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	66,194,865 - 66,203,412 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	66,194,795 - 66,203,419 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	73,270,629 - 73,279,262 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CRELD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	45,960,253 - 45,969,973 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	45,961,010 - 45,969,712 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	120,593,174 - 120,602,789 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Creld1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	4,537,089 - 4,544,256 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624731	4,537,073 - 4,544,256 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005413052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005413053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005413054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01073855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01049881	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000001584 ⟹ ENSCLAP00000001541

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955561	1,423,405 - 1,433,314 (+)	Ensembl

RefSeq Acc Id:

XM_005413052 ⟹ XP_005413109

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955561	1,423,229 - 1,430,679 (+)	NCBI

Sequence:

show sequence

ACTGCGGAGCGGTCGGAGGTTGTACGTTCTGCGCAAGCGGCGGCGGCGCGGAGGAGACGGCAGACGGCGCCCGGGGGCTGGGGCGGGCCTGTTTTCCTCCGCCGCGGTCTGCGCGGGTCCTCAGCCTG
GGAAAACATGGCCCCACAGTGCCCGAGGGGCTTAGTTTCAGCTCTGCTCTGGGGCCTGAACCTCTTCCTCAGCCTCCCAGGCCCCGTGTGGCTGCAGCCCTCTCCACCGCCCCATTCTCCTCCCCCGC
CCGAGCCCCACGCTTGCCATACGTGCCGAGCGCTGGTGGACAGCTTCAACAAGGGGCTGGAGAGAACCATCCGGGACAACTTTGGAGGTGGAAACACTGCTTGGGAGGAAGAGAAATTATCCAAATAC
AAAGACAGCGAGACCCGCCTGGTGGAGGTGCTGGAAGGGGTGTGCAGCAAGTCAGACTTCCAGTGCCACCGCCTGCTGGAGCTGAGTGAGGAGCTGGTGGAGAGCTGGTGGTTTCACAAGCAGCAGGA
AGCCCCTGACCTCTCCCAGTGGCTCTGCTCGGACTCCCTGAAGCTCTGCTGCCCTGCTGGCACCTTTGGACCCTCCTGCCTTCCCTGTCCGGGAGGCACAGAGAAACCCTGTGGTGGCTACGGGCAGT
GCCAAGGGGAAGGGACCCGAGGGGGCAGTGGGCACTGTGACTGCCAAGCCGGCTATGGAGGCGAGGCCTGTGGCCAGTGTGGCCTTGGCTACTTTGAGGCAGAACGCAACGCCAGCCATCTGGTATGT
TTGGCCTGTTTCGGCCCCTGTGCCCGCTGCTCAGGACCAGAGGAGTCACACTGTTTGCAGTGCAGGAAGGGCTGGGCCCTGCATCACCTCAAGTGTGTGGACATCGACGAGTGTGGCACCGAGCGAGC
CAGCTGCGGAGCTGACCAGTTCTGCGTGAACACAGAAGGTGCCTATGAGTGCCGAGACTGCGCCAAGGCCTGTCTGGGCTGCATGGGGGCAGGGCCAGGCCGCTGCAAGAAGTGCAGCCCTGGCTACC
AGCAGGTGGGCTCCAAGTGTCTAGATGTGGATGAGTGTGAGACAGTGGTGTGTCCAGGAGAGAATGAGAAGTGCAAGAACACCGAAGGTGCCTACCGCTGCGTCTGCGCTGAGGGCTACAAGCAGGTC
GAAGGCGTCTGCGTGAAGGAGCAGATCCCAGAGTCAGCAGGCTTCTTCTCGGAGATGACGGAGGACGAGCTGGTGGTGCTGCAGCAGATGTTCTTTGGCGTCATCATCTGTGCGCTGGCCACACTCGC
TGCCAAGGGTGACTTGGTGTTCACCGCCATCTTCATTGGGGCTGTGGCGGCCATGACTGGCTACTGGCTGTCGGAGCGCAGCGACCGCGTCCTGGAGGGCTTCATCAAGGGCAGATAATATCCTCCTC
TCCACACTTGGGTTCTCCCTCCCAGGCTGGCCTGAGGTCGGTGTCTCTCCTGCTGGACACTCAGGGCCACCTGGTTTGTCCTGGGGGTGGGGTGACACAGCCTGCCCACCTATAGTGCAGCTCAGCAC
CAGGCCTGGGCATATGTGGCCCCCAGGCGTGAGAGAGCCTGGAAGATGGATGCCACCAAATCTTTGCTGTGGGGGACTGGATAGGCCACAGTGTGTGAATTTTGAAACTCTTCCTCCTTTGGTGGCTT
TGAGTGAGTCTTGGCCCCTGCCCAGGATGAGAAGGATCCCTGCAGGAGCAGGCTACCACTGCCCTCTCCTGCCAGCTGCATGCTGCCGGCTTCTGTATTCATCTGTTCCTTTAGTCATTGACTTATTT
ATTCATCTCAGGAAATAAAGTTCTGGAAAATGGA

hide sequence

RefSeq Acc Id:

XM_005413053 ⟹ XP_005413110

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955561	1,423,252 - 1,430,679 (+)	NCBI

Sequence:

show sequence

ACGTTCTGCGCAAGCGGCGGCGGCGCGGAGGAGACGGCAGACGGCGCCCGGGGGCTGGGGCGGG
CCTGTTTTCCTCCGCCGCGGTCTGCGCGGGTATGGATCCTCCCCTGCGGGCTCCTGGGCCGTCCCTTTGTTGCCTGTCCTCAGCCTGGGAAAACATGGCCCCACAGTGCCCGAGGGGCTTAGTTTCAG
CTCTGCTCTGGGGCCTGAACCTCTTCCTCAGCCTCCCAGGCCCCGTGTGGCTGCAGCCCTCTCCACCGCCCCATTCTCCTCCCCCGCCCGAGCCCCACGCTTGCCATACGTGCCGAGCGCTGGTGGAC
AGCTTCAACAAGGGGCTGGAGAGAACCATCCGGGACAACTTTGGAGGTGGAAACACTGCTTGGGAGGAAGAGAAATTATCCAAATACAAAGACAGCGAGACCCGCCTGGTGGAGGTGCTGGAAGGGGT
GTGCAGCAAGTCAGACTTCCAGTGCCACCGCCTGCTGGAGCTGAGTGAGGAGCTGGTGGAGAGCTGGTGGTTTCACAAGCAGCAGGAAGCCCCTGACCTCTCCCAGTGGCTCTGCTCGGACTCCCTGA
AGCTCTGCTGCCCTGCTGGCACCTTTGGACCCTCCTGCCTTCCCTGTCCGGGAGGCACAGAGAAACCCTGTGGTGGCTACGGGCAGTGCCAAGGGGAAGGGACCCGAGGGGGCAGTGGGCACTGTGAC
TGCCAAGCCGGCTATGGAGGCGAGGCCTGTGGCCAGTGTGGCCTTGGCTACTTTGAGGCAGAACGCAACGCCAGCCATCTGGTATGTTTGGCCTGTTTCGGCCCCTGTGCCCGCTGCTCAGGACCAGA
GGAGTCACACTGTTTGCAGTGCAGGAAGGGCTGGGCCCTGCATCACCTCAAGTGTGTGGACATCGACGAGTGTGGCACCGAGCGAGCCAGCTGCGGAGCTGACCAGTTCTGCGTGAACACAGAAGGTG
CCTATGAGTGCCGAGACTGCGCCAAGGCCTGTCTGGGCTGCATGGGGGCAGGGCCAGGCCGCTGCAAGAAGTGCAGCCCTGGCTACCAGCAGGTGGGCTCCAAGTGTCTAGATGTGGATGAGTGTGAG
ACAGTGGTGTGTCCAGGAGAGAATGAGAAGTGCAAGAACACCGAAGGTGCCTACCGCTGCGTCTGCGCTGAGGGCTACAAGCAGGTCGAAGGCGTCTGCGTGAAGGAGCAGATCCCAGAGTCAGCAGG
CTTCTTCTCGGAGATGACGGAGGACGAGCTGGTGGTGCTGCAGCAGATGTTCTTTGGCGTCATCATCTGTGCGCTGGCCACACTCGCTGCCAAGGGTGACTTGGTGTTCACCGCCATCTTCATTGGGG
CTGTGGCGGCCATGACTGGCTACTGGCTGTCGGAGCGCAGCGACCGCGTCCTGGAGGGCTTCATCAAGGGCAGATAATATCCTCCTCTCCACACTTGGGTTCTCCCTCCCAGGCTGGCCTGAGGTCGG
TGTCTCTCCTGCTGGACACTCAGGGCCACCTGGTTTGTCCTGGGGGTGGGGTGACACAGCCTGCCCACCTATAGTGCAGCTCAGCACCAGGCCTGGGCATATGTGGCCCCCAGGCGTGAGAGAGCCTG
GAAGATGGATGCCACCAAATCTTTGCTGTGGGGGACTGGATAGGCCACAGTGTGTGAATTTTGAAACTCTTCCTCCTTTGGTGGCTTTGAGTGAGTCTTGGCCCCTGCCCAGGATGAGAAGGATCCCT
GCAGGAGCAGGCTACCACTGCCCTCTCCTGCCAGCTGCATGCTGCCGGCTTCTGTATTCATCTGTTCCTTTAGTCATTGACTTATTTATTCATCTCAGGAAATAAAGTTCTGGAAAATGGA

hide sequence

RefSeq Acc Id:

XM_005413054 ⟹ XP_005413111

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955561	1,423,405 - 1,430,679 (+)	NCBI

Sequence:

show sequence

CCGACCCCTTCTCTACAAATCCGGATCCGCGCTTCTCCCAGACCGGGTTTTCGGACTCCTCCCCCCAAGAACGCCATCTAGCCTCTTCTCTCCCAAAATTTGGGATCTGACCCCCTCTCCCAAATTCC
GCTGACCTGGCTCCTGATAAATTATTGAGACGCTAAAACAATGGGCTGACCCCTGCCCCTGCAGGCCACCGCCCCCACGGTCCTCAGCCTGGGAAAACATGGCCCCACAGTGCCCGAGGGGCTTAGTT
TCAGCTCTGCTCTGGGGCCTGAACCTCTTCCTCAGCCTCCCAGGCCCCGTGTGGCTGCAGCCCTCTCCACCGCCCCATTCTCCTCCCCCGCCCGAGCCCCACGCTTGCCATACGTGCCGAGCGCTGGT
GGACAGCTTCAACAAGGGGCTGGAGAGAACCATCCGGGACAACTTTGGAGGTGGAAACACTGCTTGGGAGGAAGAGAAATTATCCAAATACAAAGACAGCGAGACCCGCCTGGTGGAGGTGCTGGAAG
GGGTGTGCAGCAAGTCAGACTTCCAGTGCCACCGCCTGCTGGAGCTGAGTGAGGAGCTGGTGGAGAGCTGGTGGTTTCACAAGCAGCAGGAAGCCCCTGACCTCTCCCAGTGGCTCTGCTCGGACTCC
CTGAAGCTCTGCTGCCCTGCTGGCACCTTTGGACCCTCCTGCCTTCCCTGTCCGGGAGGCACAGAGAAACCCTGTGGTGGCTACGGGCAGTGCCAAGGGGAAGGGACCCGAGGGGGCAGTGGGCACTG
TGACTGCCAAGCCGGCTATGGAGGCGAGGCCTGTGGCCAGTGTGGCCTTGGCTACTTTGAGGCAGAACGCAACGCCAGCCATCTGGTATGTTTGGCCTGTTTCGGCCCCTGTGCCCGCTGCTCAGGAC
CAGAGGAGTCACACTGTTTGCAGTGCAGGAAGGGCTGGGCCCTGCATCACCTCAAGTGTGTGGACATCGACGAGTGTGGCACCGAGCGAGCCAGCTGCGGAGCTGACCAGTTCTGCGTGAACACAGAA
GGTGCCTATGAGTGCCGAGACTGCGCCAAGGCCTGTCTGGGCTGCATGGGGGCAGGGCCAGGCCGCTGCAAGAAGTGCAGCCCTGGCTACCAGCAGGTGGGCTCCAAGTGTCTAGATGTGGATGAGTG
TGAGACAGTGGTGTGTCCAGGAGAGAATGAGAAGTGCAAGAACACCGAAGGTGCCTACCGCTGCGTCTGCGCTGAGGGCTACAAGCAGGTCGAAGGCGTCTGCGTGAAGGAGCAGATCCCAGAGTCAG
CAGGCTTCTTCTCGGAGATGACGGAGGACGAGCTGGTGGTGCTGCAGCAGATGTTCTTTGGCGTCATCATCTGTGCGCTGGCCACACTCGCTGCCAAGGGTGACTTGGTGTTCACCGCCATCTTCATT
GGGGCTGTGGCGGCCATGACTGGCTACTGGCTGTCGGAGCGCAGCGACCGCGTCCTGGAGGGCTTCATCAAGGGCAGATAATATCCTCCTCTCCACACTTGGGTTCTCCCTCCCAGGCTGGCCTGAGG
TCGGTGTCTCTCCTGCTGGACACTCAGGGCCACCTGGTTTGTCCTGGGGGTGGGGTGACACAGCCTGCCCACCTATAGTGCAGCTCAGCACCAGGCCTGGGCATATGTGGCCCCCAGGCGTGAGAGAG
CCTGGAAGATGGATGCCACCAAATCTTTGCTGTGGGGGACTGGATAGGCCACAGTGTGTGAATTTTGAAACTCTTCCTCCTTTGGTGGCTTTGAGTGAGTCTTGGCCCCTGCCCAGGATGAGAAGGAT
CCCTGCAGGAGCAGGCTACCACTGCCCTCTCCTGCCAGCTGCATGCTGCCGGCTTCTGTATTCATCTGTTCCTTTAGTCATTGACTTATTTATTCATCTCAGGAAATAAAGTTCTGGAAAATGGA

hide sequence


Protein RefSeqs	XP_005413109	(Get FASTA)	NCBI Sequence Viewer
	XP_005413110	(Get FASTA)	NCBI Sequence Viewer
	XP_005413111	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000001541
	ENSCLAP00000001541.1

RefSeq Acc Id:	XP_005413109 ⟸ XM_005413052
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UNP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAPQCPRGLVSALLWGLNLFLSLPGPVWLQPSPPPHSPPPPEPHACHTCRALVDSFNKGLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSKSDFQCHRLLELSEELVESWWFHKQQEAP DLSQWLCSDSLKLCCPAGTFGPSCLPCPGGTEKPCGGYGQCQGEGTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLVCLACFGPCARCSGPEESHCLQCRKGWALHHLKCVDIDECGTERASC GADQFCVNTEGAYECRDCAKACLGCMGAGPGRCKKCSPGYQQVGSKCLDVDECETVVCPGENEKCKNTEGAYRCVCAEGYKQVEGVCVKEQIPESAGFFSEMTEDELVVLQQMFFGVIICALATLAAK GDLVFTAIFIGAVAAMTGYWLSERSDRVLEGFIKGR hide sequence

RefSeq Acc Id:

XP_005413110 ⟸ XM_005413053

- Peptide Label:

isoform X1

- Sequence:

show sequence

MDPPLRAPGPSLCCLSSAWENMAPQCPRGLVSALLWGLNLFLSLPGPVWLQPSPPPHSPPPPEP
HACHTCRALVDSFNKGLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSKSDFQCHRLLELSEELVESWWFHKQQEAPDLSQWLCSDSLKLCCPAGTFGPSCLPCPGGTEKPCGGYGQCQG
EGTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLVCLACFGPCARCSGPEESHCLQCRKGWALHHLKCVDIDECGTERASCGADQFCVNTEGAYECRDCAKACLGCMGAGPGRCKKCSPGYQQV
GSKCLDVDECETVVCPGENEKCKNTEGAYRCVCAEGYKQVEGVCVKEQIPESAGFFSEMTEDELVVLQQMFFGVIICALATLAAKGDLVFTAIFIGAVAAMTGYWLSERSDRVLEGFIKGR

hide sequence

RefSeq Acc Id:	XP_005413111 ⟸ XM_005413054
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UNP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAPQCPRGLVSALLWGLNLFLSLPGPVWLQPSPPPHSPPPPEPHACHTCRALVDSFNKGLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSKSDFQCHRLLELSEELVESWWFHKQQEAP DLSQWLCSDSLKLCCPAGTFGPSCLPCPGGTEKPCGGYGQCQGEGTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLVCLACFGPCARCSGPEESHCLQCRKGWALHHLKCVDIDECGTERASC GADQFCVNTEGAYECRDCAKACLGCMGAGPGRCKKCSPGYQQVGSKCLDVDECETVVCPGENEKCKNTEGAYRCVCAEGYKQVEGVCVKEQIPESAGFFSEMTEDELVVLQQMFFGVIICALATLAAK GDLVFTAIFIGAVAAMTGYWLSERSDRVLEGFIKGR hide sequence

Ensembl Acc Id:

ENSCLAP00000001541 ⟸ ENSCLAT00000001584

Protein Domains

EGF-like

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000001155	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000001584	ENTREZGENE
	ENSCLAT00000001584.1	UniProtKB/TrEMBL
Gene3D-CATH	Laminin	UniProtKB/TrEMBL
	Plasmodium vivax P25 domain	UniProtKB/TrEMBL
InterPro	DUF3456	UniProtKB/TrEMBL
	ECM_structural_protein	UniProtKB/TrEMBL
	EGF-like_Ca-bd_dom	UniProtKB/TrEMBL
	EGF-like_dom	UniProtKB/TrEMBL
	EGF-type_Asp/Asn_hydroxyl_site	UniProtKB/TrEMBL
	EGF_Ca-bd_CS	UniProtKB/TrEMBL
	Furin_repeat	UniProtKB/TrEMBL
	Growth_fac_rcpt_cys_sf	UniProtKB/TrEMBL
	LE_dom	UniProtKB/TrEMBL
	NOTCH1_EGF-like	UniProtKB/TrEMBL
NCBI Gene	Creld1	ENTREZGENE
PANTHER	EGF-LIKE DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	EGF-LIKE DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
Pfam	DUF3456	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
PROSITE	ASX_HYDROXYL	UniProtKB/TrEMBL
	EGF_1	UniProtKB/TrEMBL
	EGF_2	UniProtKB/TrEMBL
	EGF_3	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
	EGF_LAM_1	UniProtKB/TrEMBL
SMART	EGF	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
	SM00261	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57184	UniProtKB/TrEMBL
UniProt	A0A8C2UNP8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Creld1	cysteine rich with EGF like domains 1		cysteine-rich with EGF-like domains 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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