LOC102546480 (uncharacterized LOC102546480) - Rat Genome Database

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Gene: LOC102546480 (uncharacterized LOC102546480) Rattus norvegicus
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Symbol: LOC102546480
Name: uncharacterized LOC102546480
RGD ID: 7745235
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82020,231,223 - 20,233,879 (+)NCBIGRCr8
mRatBN7.22020,233,173 - 20,234,711 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.02021,491,235 - 21,493,071 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02023,592,045 - 23,593,576 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2021,598,049 - 21,599,885 (+)NCBICelera
Cytogenetic Map20p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC102546480
7 total Variants

1 to 10 of 23 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)201761783247606836Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20153065546530655Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20289259726381954Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126123605Rat
4889870Pur30Proteinuria QTL 30190.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20804241029322208Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600972Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20152784246527842Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124159021Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125159026Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129191651Rat

1 to 10 of 23 rows





RefSeq Transcripts XR_343828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_362173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_362173
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82020,231,223 - 20,233,879 (+)NCBI
mRatBN7.22020,233,173 - 20,234,711 (+)NCBI
Rnor_6.02021,491,235 - 21,493,071 (+)NCBI
Rnor_5.02023,592,045 - 23,593,576 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-3913 BioCyc
NCBI Gene LOC102546480 ENTREZGENE
PhenoGen LOC102546480 PhenoGen
RNAcentral URS0000CCF9CE RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102546480  uncharacterized LOC102546480      Symbol and Name status set to provisional 70820 PROVISIONAL