LOC102549857 (uncharacterized LOC102549857) - Rat Genome Database

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Gene: LOC102549857 (uncharacterized LOC102549857) Rattus norvegicus
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Symbol: LOC102549857
Name: uncharacterized LOC102549857
RGD ID: 7613549
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81826,150,332 - 26,153,500 (-)NCBIGRCr8
mRatBN7.21825,876,533 - 25,878,164 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01827,058,465 - 27,061,551 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01826,773,508 - 26,775,377 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1825,617,211 - 25,620,297 (-)NCBICelera
Cytogenetic Map18p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC102549857
9 total Variants

1 to 10 of 33 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2301410Bp317Blood pressure QTL 3170.004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194427326548295Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
1331735Rf44Renal function QTL 442.981urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181823456431359530Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194179131393320Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182206624252293055Rat

1 to 10 of 33 rows





RefSeq Transcripts XR_341859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_361302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_361302
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81826,150,332 - 26,153,500 (-)NCBI
mRatBN7.21825,876,533 - 25,878,164 (-)NCBI
Rnor_6.01827,058,465 - 27,061,551 (-)NCBI
Rnor_5.01826,773,508 - 26,775,377 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
BioCyc Gene G2FUF-7962 BioCyc
NCBI Gene LOC102549857 ENTREZGENE
PhenoGen LOC102549857 PhenoGen
RNAcentral URS0000CD07F6 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102549857  uncharacterized LOC102549857      Symbol and Name status set to provisional 70820 PROVISIONAL