MPEG1 (macrophage expressed 1) - Rat Genome Database

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Gene: MPEG1 (macrophage expressed 1) Homo sapiens
Analyze
Symbol: MPEG1
Name: macrophage expressed 1
RGD ID: 736355
HGNC Page HGNC:29619
Description: Enables wide pore channel activity. Involved in defense response to Gram-negative bacterium and defense response to Gram-positive bacterium. Located in cytoplasmic vesicle. Is active in phagolysosome membrane. Implicated in primary immunodeficiency disease.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: IMD77; likely ortholog of mouse macrophage expressed gene 1; macrophage expressed gene 1; macrophage gene 1 protein; macrophage-expressed gene 1 protein; MGC132657; MGC138435; Mpg-1; MPG1; MPS1; P-2; partial protein; perforin 2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: AP002358.2  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381159,208,510 - 59,212,927 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1159,208,510 - 59,212,927 (-)EnsemblGRCh38hg38GRCh38
GRCh371158,975,983 - 58,980,400 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361158,732,559 - 58,737,070 (-)NCBINCBI36Build 36hg18NCBI36
Celera1156,335,080 - 56,339,591 (-)NCBICelera
Cytogenetic Map11q12.1NCBI
HuRef1155,321,954 - 55,326,538 (-)NCBIHuRef
CHM1_11158,841,473 - 58,846,067 (-)NCBICHM1_1
T2T-CHM13v2.01159,157,683 - 59,162,100 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dinitrotoluene  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acetamide  (ISO)
acrolein  (ISO)
all-trans-retinoic acid  (EXP)
ammonium chloride  (ISO)
antirheumatic drug  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (ISO)
bezafibrate  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
calcitriol  (EXP)
carbon nanotube  (ISO)
CGP 52608  (EXP)
cholesterol  (ISO)
chrysene  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (EXP,ISO)
dextran sulfate  (ISO)
Dibutyl phosphate  (EXP)
diclofenac  (ISO)
dioxygen  (ISO)
diquat  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
flutamide  (ISO)
folic acid  (ISO)
furan  (ISO)
gentamycin  (ISO)
Heptachlor epoxide  (ISO)
kainic acid  (ISO)
lead diacetate  (ISO)
lead(0)  (EXP)
lipopolysaccharide  (ISO)
morphine  (ISO)
nickel atom  (EXP)
ozone  (EXP,ISO)
paracetamol  (ISO)
pentachlorophenol  (ISO)
perfluorooctanoic acid  (EXP)
phenobarbital  (ISO)
pirinixic acid  (ISO)
propiconazole  (ISO)
sodium arsenite  (ISO)
sulforaphane  (EXP)
tamoxifen  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
tetraphene  (ISO)
thioacetamide  (ISO)
titanium dioxide  (ISO)
trichloroethene  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
tungsten  (ISO)
vancomycin  (ISO)

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7888681   PMID:12477932   PMID:14702039   PMID:16344560   PMID:21873635   PMID:23257510   PMID:23753625   PMID:23898208   PMID:25814554   PMID:26307549   PMID:26402460   PMID:26418746  
PMID:28705375   PMID:30609079   PMID:31537793   PMID:32807901   PMID:32828820   PMID:33224153   PMID:33692780   PMID:34730110   PMID:37347855  


Genomics

Comparative Map Data
MPEG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381159,208,510 - 59,212,927 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1159,208,510 - 59,212,927 (-)EnsemblGRCh38hg38GRCh38
GRCh371158,975,983 - 58,980,400 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361158,732,559 - 58,737,070 (-)NCBINCBI36Build 36hg18NCBI36
Celera1156,335,080 - 56,339,591 (-)NCBICelera
Cytogenetic Map11q12.1NCBI
HuRef1155,321,954 - 55,326,538 (-)NCBIHuRef
CHM1_11158,841,473 - 58,846,067 (-)NCBICHM1_1
T2T-CHM13v2.01159,157,683 - 59,162,100 (-)NCBIT2T-CHM13v2.0
Mpeg1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391912,438,134 - 12,442,649 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1912,438,143 - 12,442,649 (+)EnsemblGRCm39 Ensembl
GRCm381912,460,770 - 12,465,285 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1912,460,779 - 12,465,283 (+)EnsemblGRCm38mm10GRCm38
MGSCv371912,535,269 - 12,539,775 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361912,527,824 - 12,532,330 (+)NCBIMGSCv36mm8
Celera1913,124,779 - 13,129,283 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map198.72NCBI
Mpeg1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81218,876,848 - 218,881,364 (+)NCBIGRCr8
mRatBN7.21209,452,176 - 209,456,692 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1209,452,133 - 209,458,855 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1217,826,816 - 217,831,286 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01224,758,435 - 224,762,905 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01217,581,271 - 217,585,741 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01228,724,559 - 228,729,054 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1228,724,900 - 228,727,160 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01235,886,584 - 235,891,070 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41215,387,912 - 215,390,172 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11215,546,341 - 215,548,602 (+)NCBI
Celera1206,869,012 - 206,873,482 (+)NCBICelera
Cytogenetic Map1q43NCBI
Mpeg1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555113,785,019 - 3,787,154 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555113,783,200 - 3,787,300 (-)NCBIChiLan1.0ChiLan1.0
MPEG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2960,330,295 - 60,335,842 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11161,373,648 - 61,377,986 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01154,425,904 - 54,442,631 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11157,877,944 - 57,882,409 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1157,880,109 - 57,882,259 (-)Ensemblpanpan1.1panPan2
MPEG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11837,530,895 - 37,535,334 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1837,531,032 - 37,533,179 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1837,065,693 - 37,070,114 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01838,181,524 - 38,185,954 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11837,780,626 - 37,785,058 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01837,349,846 - 37,354,264 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01837,973,828 - 37,978,258 (+)NCBIUU_Cfam_GSD_1.0
Mpeg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494713,306,779 - 13,319,480 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365813,421,256 - 3,431,706 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365813,428,515 - 3,436,877 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MPEG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl212,194,327 - 12,198,351 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1212,194,303 - 12,196,594 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2211,807,301 - 11,809,592 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Mpeg1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248641,470,887 - 1,473,046 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248641,470,862 - 1,474,957 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MPEG1
73 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
Single allele deletion Intellectual disability [RCV001293382] Chr11:118359328..118372573 [GRCh37]
Chr11:11p15.3-q23.3
pathogenic
NM_001039396.1(MPEG1):c.2052G>A (p.Lys684=) single nucleotide variant Malignant melanoma [RCV000062296] Chr11:59210814 [GRCh38]
Chr11:58978287 [GRCh37]
Chr11:58734863 [NCBI36]
Chr11:11q12.1
not provided
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) copy number gain See cases [RCV000511729] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 copy number gain See cases [RCV000510881] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
NM_001039396.2(MPEG1):c.148G>C (p.Gly50Arg) single nucleotide variant not specified [RCV004300680] Chr11:59212718 [GRCh38]
Chr11:58980191 [GRCh37]
Chr11:11q12.1
uncertain significance
GRCh37/hg19 11q12.1-12.3(chr11:58935215-62177656)x3 copy number gain not provided [RCV000683362] Chr11:58935215..62177656 [GRCh37]
Chr11:11q12.1-12.3
likely pathogenic
GRCh37/hg19 11p11.12-q12.1(chr11:49313405-59008426)x3 copy number gain not provided [RCV000683370] Chr11:49313405..59008426 [GRCh37]
Chr11:11p11.12-q12.1
uncertain significance
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 copy number gain not provided [RCV000737348] Chr11:198510..134934063 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 copy number gain not provided [RCV000749874] Chr11:70864..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11q12.1(chr11:58846985-59065644)x3 copy number gain not provided [RCV000750066] Chr11:58846985..59065644 [GRCh37]
Chr11:11q12.1
benign
NM_001039396.2(MPEG1):c.705C>T (p.Ala235=) single nucleotide variant not provided [RCV000967205] Chr11:59212161 [GRCh38]
Chr11:58979634 [GRCh37]
Chr11:11q12.1
benign
NM_001039396.2(MPEG1):c.529G>A (p.Asp177Asn) single nucleotide variant not provided [RCV000901109] Chr11:59212337 [GRCh38]
Chr11:58979810 [GRCh37]
Chr11:11q12.1
likely benign
NM_001039396.2(MPEG1):c.545T>A (p.Leu182Gln) single nucleotide variant not specified [RCV004284509] Chr11:59212321 [GRCh38]
Chr11:58979794 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.661C>A (p.Leu221Ile) single nucleotide variant Castleman-Kojima disease [RCV000824696] Chr11:59212205 [GRCh38]
Chr11:58979678 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.413C>A (p.Thr138Asn) single nucleotide variant not specified [RCV004308347] Chr11:59212453 [GRCh38]
Chr11:58979926 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1558T>C (p.Leu520=) single nucleotide variant not provided [RCV000909743] Chr11:59211308 [GRCh38]
Chr11:58978781 [GRCh37]
Chr11:11q12.1
benign
NM_001039396.2(MPEG1):c.1401C>T (p.Ala467=) single nucleotide variant not provided [RCV000889668] Chr11:59211465 [GRCh38]
Chr11:58978938 [GRCh37]
Chr11:11q12.1
benign
NM_001039396.2(MPEG1):c.973C>T (p.Pro325Ser) single nucleotide variant Primary ciliary dyskinesia 3 [RCV003234813] Chr11:59211893 [GRCh38]
Chr11:58979366 [GRCh37]
Chr11:11q12.1
pathogenic
NM_001039396.2(MPEG1):c.1290C>A (p.Tyr430Ter) single nucleotide variant Immunodeficiency 77 [RCV001338479]|MPEG1-related immunodeficiency [RCV001255987] Chr11:59211576 [GRCh38]
Chr11:58979049 [GRCh37]
Chr11:11q12.1
pathogenic|uncertain significance
GRCh37/hg19 11q12.1(chr11:58602498-59091934)x3 copy number gain not provided [RCV001260128] Chr11:58602498..59091934 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.217A>G (p.Thr73Ala) single nucleotide variant Immunodeficiency 77 [RCV001338472]|not provided [RCV003393984] Chr11:59212649 [GRCh38]
Chr11:58980122 [GRCh37]
Chr11:11q12.1
pathogenic|likely benign
NM_001039396.2(MPEG1):c.1192C>T (p.Gln398Ter) single nucleotide variant Immunodeficiency 77 [RCV001338474] Chr11:59211674 [GRCh38]
Chr11:58979147 [GRCh37]
Chr11:11q12.1
pathogenic
NM_001039396.2(MPEG1):c.1213C>A (p.Pro405Thr) single nucleotide variant Immunodeficiency 77 [RCV001338476]|not provided [RCV004570809] Chr11:59211653 [GRCh38]
Chr11:58979126 [GRCh37]
Chr11:11q12.1
pathogenic|likely benign
NC_000011.9:g.(?_58916346)_(64972349_?)dup duplication Leukocyte adhesion deficiency 3 [RCV003113394]|not provided [RCV003113393] Chr11:58916346..64972349 [GRCh37]
Chr11:11q12.1-13.1
uncertain significance|no classifications from unflagged records
NM_001039396.2(MPEG1):c.445C>T (p.Arg149Ter) single nucleotide variant Immunodeficiency 77 [RCV002272000] Chr11:59212421 [GRCh38]
Chr11:58979894 [GRCh37]
Chr11:11q12.1
uncertain significance
GRCh37/hg19 11p13-q25(chr11:32799481-134938470)x3 copy number gain MISSED ABORTION [RCV002282973] Chr11:32799481..134938470 [GRCh37]
Chr11:11p13-q25
pathogenic
GRCh37/hg19 11p11.2-q12.2(chr11:51581311-54891247)x3 copy number gain See cases [RCV002286338] Chr11:51581311..54891247 [GRCh37]
Chr11:11p11.2-q12.2
pathogenic
NM_001039396.2(MPEG1):c.1009G>A (p.Ala337Thr) single nucleotide variant not specified [RCV004321569] Chr11:59211857 [GRCh38]
Chr11:58979330 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1464A>G (p.Ile488Met) single nucleotide variant not specified [RCV004316390] Chr11:59211402 [GRCh38]
Chr11:58978875 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1796C>A (p.Pro599Gln) single nucleotide variant not specified [RCV004100378] Chr11:59211070 [GRCh38]
Chr11:58978543 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1838C>T (p.Thr613Ile) single nucleotide variant not specified [RCV004154041] Chr11:59211028 [GRCh38]
Chr11:58978501 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1004A>C (p.Glu335Ala) single nucleotide variant not specified [RCV004244119] Chr11:59211862 [GRCh38]
Chr11:58979335 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1693C>T (p.Pro565Ser) single nucleotide variant not specified [RCV004130988] Chr11:59211173 [GRCh38]
Chr11:58978646 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1193A>C (p.Gln398Pro) single nucleotide variant not specified [RCV004128549] Chr11:59211673 [GRCh38]
Chr11:58979146 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.2110G>A (p.Gly704Arg) single nucleotide variant not specified [RCV004154241] Chr11:59210756 [GRCh38]
Chr11:58978229 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.164G>A (p.Arg55Gln) single nucleotide variant not specified [RCV004222847] Chr11:59212702 [GRCh38]
Chr11:58980175 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.464T>C (p.Leu155Pro) single nucleotide variant not specified [RCV004158722] Chr11:59212402 [GRCh38]
Chr11:58979875 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1769C>A (p.Pro590His) single nucleotide variant not specified [RCV004230074] Chr11:59211097 [GRCh38]
Chr11:58978570 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.529G>C (p.Asp177His) single nucleotide variant not specified [RCV004133450] Chr11:59212337 [GRCh38]
Chr11:58979810 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1985T>G (p.Val662Gly) single nucleotide variant not specified [RCV004131516] Chr11:59210881 [GRCh38]
Chr11:58978354 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1792C>T (p.Arg598Trp) single nucleotide variant not specified [RCV004080834] Chr11:59211074 [GRCh38]
Chr11:58978547 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1342G>A (p.Val448Met) single nucleotide variant not specified [RCV004185914] Chr11:59211524 [GRCh38]
Chr11:58978997 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1594T>C (p.Phe532Leu) single nucleotide variant not specified [RCV004163093] Chr11:59211272 [GRCh38]
Chr11:58978745 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1460G>A (p.Ser487Asn) single nucleotide variant not specified [RCV004138549] Chr11:59211406 [GRCh38]
Chr11:58978879 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.448G>A (p.Val150Ile) single nucleotide variant not specified [RCV004097722] Chr11:59212418 [GRCh38]
Chr11:58979891 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.379G>A (p.Gly127Ser) single nucleotide variant not specified [RCV004078206] Chr11:59212487 [GRCh38]
Chr11:58979960 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.2038C>T (p.Arg680Trp) single nucleotide variant not specified [RCV004084305] Chr11:59210828 [GRCh38]
Chr11:58978301 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1904C>T (p.Pro635Leu) single nucleotide variant not specified [RCV004131636] Chr11:59210962 [GRCh38]
Chr11:58978435 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1919G>C (p.Arg640Thr) single nucleotide variant not specified [RCV004276362] Chr11:59210947 [GRCh38]
Chr11:58978420 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1373C>G (p.Ala458Gly) single nucleotide variant not specified [RCV004276343] Chr11:59211493 [GRCh38]
Chr11:58978966 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1613A>G (p.Asn538Ser) single nucleotide variant not specified [RCV004272463] Chr11:59211253 [GRCh38]
Chr11:58978726 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.646A>C (p.Ile216Leu) single nucleotide variant not specified [RCV004259701] Chr11:59212220 [GRCh38]
Chr11:58979693 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1865T>C (p.Ile622Thr) single nucleotide variant Immunodeficiency 77 [RCV003142313] Chr11:59211001 [GRCh38]
Chr11:58978474 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.746A>G (p.Asn249Ser) single nucleotide variant Immunodeficiency 77 [RCV003225792] Chr11:59212120 [GRCh38]
Chr11:58979593 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.355C>T (p.Leu119Phe) single nucleotide variant not specified [RCV004307199] Chr11:59212511 [GRCh38]
Chr11:58979984 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.388del (p.Ser130fs) deletion not provided [RCV003322111] Chr11:59212478 [GRCh38]
Chr11:58979951 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1474A>G (p.Thr492Ala) single nucleotide variant not specified [RCV004363303] Chr11:59211392 [GRCh38]
Chr11:58978865 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.671C>T (p.Ser224Phe) single nucleotide variant not provided [RCV003395813] Chr11:59212195 [GRCh38]
Chr11:58979668 [GRCh37]
Chr11:11q12.1
likely benign
NM_001039396.2(MPEG1):c.508G>A (p.Gly170Ser) single nucleotide variant not specified [RCV004356213] Chr11:59212358 [GRCh38]
Chr11:58979831 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.357C>G (p.Leu119=) single nucleotide variant not provided [RCV003390061] Chr11:59212509 [GRCh38]
Chr11:58979982 [GRCh37]
Chr11:11q12.1
likely benign
NM_001039396.2(MPEG1):c.1339A>T (p.Thr447Ser) single nucleotide variant not provided [RCV003395812] Chr11:59211527 [GRCh38]
Chr11:58979000 [GRCh37]
Chr11:11q12.1
likely benign
NM_001039396.2(MPEG1):c.775C>G (p.Gln259Glu) single nucleotide variant MPEG1-related disorder [RCV003404270] Chr11:59212091 [GRCh38]
Chr11:58979564 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1574C>T (p.Ala525Val) single nucleotide variant Immunodeficiency 77 [RCV003493079] Chr11:59211292 [GRCh38]
Chr11:58978765 [GRCh37]
Chr11:11q12.1
uncertain significance
GRCh37/hg19 11p11.12-q13.1(chr11:50398499-63924462)x3 copy number gain not specified [RCV003986918] Chr11:50398499..63924462 [GRCh37]
Chr11:11p11.12-q13.1
likely pathogenic
GRCh37/hg19 11q12.1-13.3(chr11:56895955-69295402)x3 copy number gain not specified [RCV003986944] Chr11:56895955..69295402 [GRCh37]
Chr11:11q12.1-13.3
likely pathogenic
NM_001039396.2(MPEG1):c.1547A>T (p.Gln516Leu) single nucleotide variant not specified [RCV004491003] Chr11:59211319 [GRCh38]
Chr11:58978792 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1655C>A (p.Pro552Gln) single nucleotide variant not specified [RCV004491005] Chr11:59211211 [GRCh38]
Chr11:58978684 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.361C>T (p.Leu121Phe) single nucleotide variant not specified [RCV004491036] Chr11:59212505 [GRCh38]
Chr11:58979978 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1078T>A (p.Phe360Ile) single nucleotide variant Immunodeficiency 77 [RCV003989347] Chr11:59211788 [GRCh38]
Chr11:58979261 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.577C>G (p.Leu193Val) single nucleotide variant not specified [RCV004491058] Chr11:59212289 [GRCh38]
Chr11:58979762 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.650A>G (p.Gln217Arg) single nucleotide variant not specified [RCV004491065] Chr11:59212216 [GRCh38]
Chr11:58979689 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1156A>G (p.Thr386Ala) single nucleotide variant not specified [RCV004490992] Chr11:59211710 [GRCh38]
Chr11:58979183 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.130G>C (p.Glu44Gln) single nucleotide variant not specified [RCV004490994] Chr11:59212736 [GRCh38]
Chr11:58980209 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1911G>T (p.Glu637Asp) single nucleotide variant not specified [RCV004491023] Chr11:59210955 [GRCh38]
Chr11:58978428 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.376A>G (p.Asn126Asp) single nucleotide variant not specified [RCV004491039] Chr11:59212490 [GRCh38]
Chr11:58979963 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.805A>G (p.Asn269Asp) single nucleotide variant not specified [RCV004491070] Chr11:59212061 [GRCh38]
Chr11:58979534 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.491C>T (p.Thr164Ile) single nucleotide variant MPEG1-related disorder [RCV003911704] Chr11:59212375 [GRCh38]
Chr11:58979848 [GRCh37]
Chr11:11q12.1
likely benign
NM_001039396.2(MPEG1):c.1732G>A (p.Val578Ile) single nucleotide variant not specified [RCV004491008] Chr11:59211134 [GRCh38]
Chr11:58978607 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.719C>T (p.Ala240Val) single nucleotide variant not specified [RCV004491067] Chr11:59212147 [GRCh38]
Chr11:58979620 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.623G>A (p.Ser208Asn) single nucleotide variant Immunodeficiency 77 [RCV003990541] Chr11:59212243 [GRCh38]
Chr11:58979716 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.367T>C (p.Ser123Pro) single nucleotide variant not specified [RCV004643411] Chr11:59212499 [GRCh38]
Chr11:58979972 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.94C>A (p.Gln32Lys) single nucleotide variant not specified [RCV004629078] Chr11:59212772 [GRCh38]
Chr11:58980245 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.766T>C (p.Tyr256His) single nucleotide variant not specified [RCV004629079] Chr11:59212100 [GRCh38]
Chr11:58979573 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.560C>T (p.Thr187Met) single nucleotide variant not specified [RCV004629080] Chr11:59212306 [GRCh38]
Chr11:58979779 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.697C>T (p.Arg233Cys) single nucleotide variant not specified [RCV004643414] Chr11:59212169 [GRCh38]
Chr11:58979642 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1295_1296del (p.His432fs) deletion Immunodeficiency 77 [RCV004595002] Chr11:59211570..59211571 [GRCh38]
Chr11:58979043..58979044 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.188T>C (p.Met63Thr) single nucleotide variant not specified [RCV004643412] Chr11:59212678 [GRCh38]
Chr11:58980151 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.328A>G (p.Ser110Gly) single nucleotide variant not specified [RCV004643410] Chr11:59212538 [GRCh38]
Chr11:58980011 [GRCh37]
Chr11:11q12.1
uncertain significance
NM_001039396.2(MPEG1):c.1531A>C (p.Lys511Gln) single nucleotide variant not specified [RCV004643413] Chr11:59211335 [GRCh38]
Chr11:58978808 [GRCh37]
Chr11:11q12.1
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:794
Count of miRNA genes:558
Interacting mature miRNAs:613
Transcripts:ENST00000361050
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH16197  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371159,052,718 - 59,052,869UniSTSGRCh37
GRCh371158,976,120 - 58,976,271UniSTSGRCh37
Build 361158,732,696 - 58,732,847RGDNCBI36
Celera1156,414,019 - 56,414,170UniSTS
Celera1156,335,217 - 56,335,368RGD
Cytogenetic Map11q12.1UniSTS
HuRef1155,322,091 - 55,322,242UniSTS
HuRef1155,400,272 - 55,400,423UniSTS
GeneMap99-GB4 RH Map11221.63UniSTS
D11S4376  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,976,661 - 58,976,775UniSTSGRCh37
Build 361158,733,237 - 58,733,351RGDNCBI36
Celera1156,335,758 - 56,335,872RGD
Cytogenetic Map11q12.1UniSTS
HuRef1155,322,632 - 55,322,746UniSTS
Whitehead-YAC Contig Map11 UniSTS
SHGC-34178  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,975,919 - 58,976,050UniSTSGRCh37
Build 361158,732,495 - 58,732,626RGDNCBI36
Celera1156,335,016 - 56,335,147RGD
Cytogenetic Map11q12.1UniSTS
HuRef1155,321,890 - 55,322,021UniSTS
Stanford-G3 RH Map112524.0UniSTS
GeneMap99-GB4 RH Map11219.45UniSTS
Whitehead-RH Map11284.3UniSTS
NCBI RH Map11532.2UniSTS
GeneMap99-G3 RH Map112524.0UniSTS
SHGC-172487  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,977,692 - 58,978,039UniSTSGRCh37
Build 361158,734,268 - 58,734,615RGDNCBI36
Celera1156,336,789 - 56,337,136RGD
Cytogenetic Map11q12.1UniSTS
HuRef1155,323,736 - 55,324,083UniSTS
TNG Radiation Hybrid Map1126040.0UniSTS
STS-T98251  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371159,052,964 - 59,053,098UniSTSGRCh37
GRCh371158,976,366 - 58,976,505UniSTSGRCh37
Build 361158,732,942 - 58,733,081RGDNCBI36
Celera1156,414,265 - 56,414,399UniSTS
Celera1156,335,463 - 56,335,602RGD
Cytogenetic Map11q12.1UniSTS
HuRef1155,322,337 - 55,322,476UniSTS
HuRef1155,400,518 - 55,400,652UniSTS
GeneMap99-GB4 RH Map11221.63UniSTS
RH17632  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371158,979,934 - 58,980,192UniSTSGRCh37
Build 361158,736,510 - 58,736,768RGDNCBI36
Celera1156,339,031 - 56,339,289RGD
Cytogenetic Map11q12.1UniSTS
HuRef1155,325,978 - 55,326,236UniSTS
GeneMap99-GB4 RH Map11220.88UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2334 2788 2251 4670 1696 2113 4 606 1855 443 2032 7065 6356 6 3654 1 806 1652 1405 166 1

Sequence


Ensembl Acc Id: ENST00000361050   ⟹   ENSP00000354335
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1159,208,510 - 59,212,927 (-)Ensembl
RefSeq Acc Id: NM_001039396   ⟹   NP_001034485
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381159,208,510 - 59,212,927 (-)NCBI
GRCh371158,975,983 - 58,980,494 (-)RGD
Build 361158,732,559 - 58,737,070 (-)NCBI Archive
Celera1156,335,080 - 56,339,591 (-)RGD
HuRef1155,321,954 - 55,326,538 (-)RGD
CHM1_11158,841,473 - 58,846,067 (-)NCBI
T2T-CHM13v2.01159,157,683 - 59,162,100 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001034485   ⟸   NM_001039396
- Peptide Label: precursor
- UniProtKB: Q2M385 (UniProtKB/Swiss-Prot),   Q2M1T6 (UniProtKB/Swiss-Prot),   Q8TEF8 (UniProtKB/Swiss-Prot),   B3KUT2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000354335   ⟸   ENST00000361050
Protein Domains
MACPF

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q2M385-F1-model_v2 AlphaFold Q2M385 1-716 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:29619 AgrOrtholog
COSMIC MPEG1 COSMIC
Ensembl Genes ENSG00000197629 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000361050 ENTREZGENE
  ENST00000361050.4 UniProtKB/Swiss-Prot
GTEx ENSG00000197629 GTEx
HGNC ID HGNC:29619 ENTREZGENE
Human Proteome Map MPEG1 Human Proteome Map
InterPro MACPF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MPEG1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:219972 UniProtKB/Swiss-Prot
NCBI Gene 219972 ENTREZGENE
OMIM 610390 OMIM
PANTHER MACROPHAGE-EXPRESSED GENE 1 PROTEIN UniProtKB/Swiss-Prot
  MACROPHAGE-EXPRESSED GENE 1 PROTEIN UniProtKB/TrEMBL
  MACROPHAGE-EXPRESSED GENE 1 PROTEIN UniProtKB/TrEMBL
  PTHR31463 UniProtKB/Swiss-Prot
Pfam MACPF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA164723088 PharmGKB
PROSITE MACPF_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART MACPF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B3KUT2 ENTREZGENE, UniProtKB/TrEMBL
  MPEG1_HUMAN UniProtKB/Swiss-Prot
  Q2M1T6 ENTREZGENE
  Q2M385 ENTREZGENE
  Q8TEF8 ENTREZGENE
UniProt Secondary Q2M1T6 UniProtKB/Swiss-Prot
  Q8TEF8 UniProtKB/Swiss-Prot