Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Craniofacial Abnormalities | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:16759393 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Craniofacial Abnormalities | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:16759393 | |
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# | Reference Title | Reference Citation |
1. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
2. | SMPDB Annotation Import Pipeline | Pipeline to import SMPDB annotations from SMPDB into RGD |
3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:8125298 | PMID:11877387 | PMID:12391314 | PMID:12477932 | PMID:12975309 | PMID:14702039 | PMID:15489334 | PMID:15815621 | PMID:16303743 | PMID:16344560 | PMID:19027726 | PMID:19028698 |
PMID:19199708 | PMID:19913121 | PMID:20379614 | PMID:20628086 | PMID:20877624 | PMID:21294126 | PMID:21653829 | PMID:21873635 | PMID:22810237 | PMID:23072385 | PMID:23656592 | PMID:25521717 |
PMID:26186194 | PMID:27503909 | PMID:27609421 | PMID:28514442 | PMID:28611215 | PMID:30021884 | PMID:30572598 | PMID:31527615 | PMID:32513696 | PMID:33087821 | PMID:33961781 | PMID:34373451 |
PMID:35271311 | PMID:35337019 | PMID:35696571 | PMID:35944360 | PMID:36215168 | PMID:38030856 |
UXS1 (Homo sapiens - human) |
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Uxs1 (Mus musculus - house mouse) |
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Uxs1 (Rattus norvegicus - Norway rat) |
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Uxs1 (Chinchilla lanigera - long-tailed chinchilla) |
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UXS1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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UXS1 (Canis lupus familiaris - dog) |
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Uxs1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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UXS1 (Sus scrofa - pig) |
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UXS1 (Chlorocebus sabaeus - green monkey) |
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Uxs1 (Heterocephalus glaber - naked mole-rat) |
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Variants in UXS1
24 total Variants |
Name | Type | Condition(s) | Position(s) | Clinical significance |
GRCh38/hg38 2q11.2-12.3(chr2:100378510-108472871)x3 | copy number gain | See cases [RCV000050836] | Chr2:100378510..108472871 [GRCh38] Chr2:100994972..109089327 [GRCh37] Chr2:100361404..108455759 [NCBI36] Chr2:2q11.2-12.3 |
pathogenic |
GRCh38/hg38 2q12.2-12.3(chr2:105828398-108080417)x3 | copy number gain | See cases [RCV000052691] | Chr2:105828398..108080417 [GRCh38] Chr2:106444854..108696873 [GRCh37] Chr2:105811286..108063305 [NCBI36] Chr2:2q12.2-12.3 |
uncertain significance |
GRCh38/hg38 2q11.2-13(chr2:97672522-110211318)x3 | copy number gain | See cases [RCV000052947] | Chr2:97672522..110211318 [GRCh38] Chr2:98288985..110968895 [GRCh37] Chr2:97655417..110326184 [NCBI36] Chr2:2q11.2-13 |
pathogenic |
GRCh38/hg38 2q12.1-12.3(chr2:104381722-107312459)x1 | copy number loss | See cases [RCV000135282] | Chr2:104381722..107312459 [GRCh38] Chr2:104998180..107928915 [GRCh37] Chr2:104364612..107295347 [NCBI36] Chr2:2q12.1-12.3 |
likely pathogenic |
GRCh38/hg38 2q12.1-12.2(chr2:105239034-106152100)x3 | copy number gain | See cases [RCV000135475] | Chr2:105239034..106152100 [GRCh38] Chr2:105855491..106768556 [GRCh37] Chr2:105221923..106134988 [NCBI36] Chr2:2q12.1-12.2 |
benign |
GRCh38/hg38 2q11.2-13(chr2:101710825-110791418)x3 | copy number gain | See cases [RCV000138645] | Chr2:101710825..110791418 [GRCh38] Chr2:102327287..111548995 [GRCh37] Chr2:101693719..111265466 [NCBI36] Chr2:2q11.2-13 |
pathogenic |
GRCh38/hg38 2q11.1-13(chr2:94678532-110602409)x3 | copy number gain | See cases [RCV000141075] | Chr2:94678532..110602409 [GRCh38] Chr2:95344257..111359986 [GRCh37] Chr2:94707984..111076455 [NCBI36] Chr2:2q11.1-13 |
pathogenic |
GRCh38/hg38 2q11.2-12.2(chr2:100478285-106498909)x3 | copy number gain | See cases [RCV000141445] | Chr2:100478285..106498909 [GRCh38] Chr2:101094747..107115365 [GRCh37] Chr2:100461179..106481797 [NCBI36] Chr2:2q11.2-12.2 |
uncertain significance |
GRCh38/hg38 2q12.2-12.3(chr2:106170872-106809420)x3 | copy number gain | See cases [RCV000142302] | Chr2:106170872..106809420 [GRCh38] Chr2:106787328..107425876 [GRCh37] Chr2:106153760..106792308 [NCBI36] Chr2:2q12.2-12.3 |
uncertain significance |
GRCh37/hg19 2q12.2-14.1(chr2:106423310-115054828)x1 | copy number loss | See cases [RCV000240053] | Chr2:106423310..115054828 [GRCh37] Chr2:2q12.2-14.1 |
pathogenic |
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 | copy number gain | not provided [RCV000752802] | Chr2:14238..243048760 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 | copy number gain | not provided [RCV000752804] | Chr2:15672..243101834 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
GRCh37/hg19 2q11.1-12.3(chr2:95529039-108518266) | copy number gain | See cases [RCV000449270] | Chr2:95529039..108518266 [GRCh37] Chr2:2q11.1-12.3 |
pathogenic |
GRCh37/hg19 2q11.1-13(chr2:95327499-111370025)x4 | copy number gain | See cases [RCV000446842] | Chr2:95327499..111370025 [GRCh37] Chr2:2q11.1-13 |
pathogenic |
GRCh37/hg19 2q12.2(chr2:106791392-107425876)x3 | copy number gain | See cases [RCV000448657] | Chr2:106791392..107425876 [GRCh37] Chr2:2q12.2 |
uncertain significance |
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) | copy number gain | See cases [RCV000512056] | Chr2:12771..242783384 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
GRCh37/hg19 2q12.2(chr2:106794872-107014384)x1 | copy number loss | See cases [RCV000511743] | Chr2:106794872..107014384 [GRCh37] Chr2:2q12.2 |
likely benign |
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 | copy number gain | See cases [RCV000511212] | Chr2:12771..242783384 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
GRCh37/hg19 2q11.1-12.2(chr2:95518497-107186127) | copy number gain | See cases [RCV000511158] | Chr2:95518497..107186127 [GRCh37] Chr2:2q11.1-12.2 |
uncertain significance |
GRCh37/hg19 2q12.1-24.3(chr2:104172062-168223828)x1 | copy number loss | Poly (ADP-Ribose) polymerase inhibitor response [RCV000626436] | Chr2:104172062..168223828 [GRCh37] Chr2:2q12.1-24.3 |
drug response |
GRCh37/hg19 2q12.2(chr2:106788511-107425876)x3 | copy number gain | not provided [RCV000682095] | Chr2:106788511..107425876 [GRCh37] Chr2:2q12.2 |
uncertain significance |
GRCh37/hg19 2q11.1-13(chr2:96353030-114045463)x3 | copy number gain | not provided [RCV000682168] | Chr2:96353030..114045463 [GRCh37] Chr2:2q11.1-13 |
pathogenic |
Single allele | deletion | not provided [RCV000714264] | Chr2:40608411..146900718 [GRCh37] Chr2:2p22.1-q22.3 |
likely pathogenic |
GRCh37/hg19 2q12.2(chr2:106547252-106992981)x3 | copy number gain | not provided [RCV001005301] | Chr2:106547252..106992981 [GRCh37] Chr2:2q12.2 |
uncertain significance |
GRCh37/hg19 2q12.2-12.3(chr2:106596090-107516533)x3 | copy number gain | not provided [RCV000848935] | Chr2:106596090..107516533 [GRCh37] Chr2:2q12.2-12.3 |
uncertain significance |
GRCh37/hg19 2q12.1-12.2(chr2:102917327-106755564)x1 | copy number loss | not provided [RCV000848959] | Chr2:102917327..106755564 [GRCh37] Chr2:2q12.1-12.2 |
uncertain significance |
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) | copy number gain | Mosaic trisomy 2 [RCV002280628] | Chr2:1..243199373 [GRCh37] Chr2:2p25.3-q37.3 |
pathogenic |
GRCh37/hg19 2q12.2(chr2:106791212-107425876)x3 | copy number gain | not provided [RCV001827802] | Chr2:106791212..107425876 [GRCh37] Chr2:2q12.2 |
uncertain significance |
GRCh37/hg19 2p25.1-q13(chr2:11504318-111365996)x1 | copy number loss | See cases [RCV002287563] | Chr2:11504318..111365996 [GRCh37] Chr2:2p25.1-q13 |
pathogenic |
NM_001253875.2(UXS1):c.762A>C (p.Glu254Asp) | single nucleotide variant | Inborn genetic diseases [RCV002969282] | Chr2:106112763 [GRCh38] Chr2:106729219 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.925G>A (p.Asp309Asn) | single nucleotide variant | Inborn genetic diseases [RCV002732109] | Chr2:106101117 [GRCh38] Chr2:106717573 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.1255A>C (p.Lys419Gln) | single nucleotide variant | Inborn genetic diseases [RCV002778085] | Chr2:106094049 [GRCh38] Chr2:106710505 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.697C>T (p.Arg233Trp) | single nucleotide variant | Inborn genetic diseases [RCV002782270] | Chr2:106123032 [GRCh38] Chr2:106739488 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.1268G>A (p.Arg423His) | single nucleotide variant | Inborn genetic diseases [RCV002745031] | Chr2:106094036 [GRCh38] Chr2:106710492 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.1004C>G (p.Thr335Arg) | single nucleotide variant | Inborn genetic diseases [RCV002802549] | Chr2:106098754 [GRCh38] Chr2:106715210 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.952A>G (p.Met318Val) | single nucleotide variant | Inborn genetic diseases [RCV002959685] | Chr2:106101090 [GRCh38] Chr2:106717546 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.151A>G (p.Asn51Asp) | single nucleotide variant | Inborn genetic diseases [RCV002792492] | Chr2:106164771 [GRCh38] Chr2:106781227 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.602G>A (p.Arg201His) | single nucleotide variant | Inborn genetic diseases [RCV002713879] | Chr2:106125655 [GRCh38] Chr2:106742111 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.35C>T (p.Ala12Val) | single nucleotide variant | Inborn genetic diseases [RCV002718842] | Chr2:106194207 [GRCh38] Chr2:106810663 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.601C>T (p.Arg201Cys) | single nucleotide variant | Inborn genetic diseases [RCV002677371] | Chr2:106125656 [GRCh38] Chr2:106742112 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.400G>A (p.Val134Met) | single nucleotide variant | Inborn genetic diseases [RCV003210340] | Chr2:106145262 [GRCh38] Chr2:106761718 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.184G>C (p.Glu62Gln) | single nucleotide variant | Inborn genetic diseases [RCV003218406] | Chr2:106164738 [GRCh38] Chr2:106781194 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.809G>A (p.Arg270His) | single nucleotide variant | Inborn genetic diseases [RCV003191932] | Chr2:106112716 [GRCh38] Chr2:106729172 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.5T>C (p.Val2Ala) | single nucleotide variant | Inborn genetic diseases [RCV003381281] | Chr2:106194237 [GRCh38] Chr2:106810693 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.550A>G (p.Asn184Asp) | single nucleotide variant | Inborn genetic diseases [RCV003371859] | Chr2:106129701 [GRCh38] Chr2:106746157 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.138G>C (p.Arg46Ser) | single nucleotide variant | Inborn genetic diseases [RCV003381964] | Chr2:106164784 [GRCh38] Chr2:106781240 [GRCh37] Chr2:2q12.2 |
uncertain significance |
NM_001253875.2(UXS1):c.607C>G (p.Leu203Val) | single nucleotide variant | Inborn genetic diseases [RCV003366033] | Chr2:106125650 [GRCh38] Chr2:106742106 [GRCh37] Chr2:2q12.2 |
uncertain significance |
GRCh37/hg19 2q12.2-21.2(chr2:106755586-134302739)x1 | copy number loss | not specified [RCV003986380] | Chr2:106755586..134302739 [GRCh37] Chr2:2q12.2-21.2 |
pathogenic |
GRCh37/hg19 2q12.1-12.2(chr2:105674582-106762678)x1 | copy number loss | not specified [RCV003986360] | Chr2:105674582..106762678 [GRCh37] Chr2:2q12.1-12.2 |
uncertain significance |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RH36460 |
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RH70063 |
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RH26280 |
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SHGC-83592 |
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SHGC-107402 |
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SHGC-142052 |
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SHGC-145369 |
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WIAF-1518 |
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RH12428 |
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RH18480 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | sensory system | visual system | adipose tissue | appendage | entire extraembryonic component | pharyngeal arch | |
High | ||||||||||||||||||
Medium | 1985 | 1527 | 1158 | 177 | 1017 | 110 | 3124 | 1048 | 2523 | 349 | 1381 | 1582 | 81 | 882 | 1885 | 3 | ||
Low | 453 | 1460 | 568 | 446 | 930 | 355 | 1232 | 1149 | 1209 | 70 | 77 | 31 | 93 | 1 | 322 | 903 | 3 | 1 |
Below cutoff | 1 | 4 | 1 | 4 | 2 | 1 | 1 | 1 |
RefSeq Transcripts | NM_001253875 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001253876 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001377504 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001377505 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001377506 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001377507 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001377508 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001377509 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_025076 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_045607 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_165308 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_011511902 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_011511903 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017005011 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017005014 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_024453157 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_047445918 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054344035 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054344036 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054344037 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054344038 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054344039 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054344040 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC018878 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AI217133 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK027244 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK056022 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK057242 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK075120 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK075170 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK122696 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK225592 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK290668 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK304872 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AL834439 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AY147934 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AY358541 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC009819 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BI550591 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BI825770 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BM472113 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BX366726 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CF242897 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH471127 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CP068276 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CQ783167 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CQ783244 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
DB379311 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENST00000283148 ⟹ ENSP00000283148 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000409032 ⟹ ENSP00000387096 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000409501 ⟹ ENSP00000387019 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000416298 ⟹ ENSP00000403612 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000436241 ⟹ ENSP00000397049 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000441952 ⟹ ENSP00000416656 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000444193 ⟹ ENSP00000404468 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000457835 ⟹ ENSP00000399316 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000470053 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000473338 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000474920 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000479621 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000479774 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000483426 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENST00000497604 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | NM_001253875 ⟹ NP_001240804 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001253876 ⟹ NP_001240805 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001377504 ⟹ NP_001364433 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001377505 ⟹ NP_001364434 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001377506 ⟹ NP_001364435 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001377507 ⟹ NP_001364436 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001377508 ⟹ NP_001364437 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_001377509 ⟹ NP_001364438 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NM_025076 ⟹ NP_079352 | ||||||||||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | NR_045607 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | NON-CODING | ||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | NR_165308 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | XM_011511902 ⟹ XP_011510204 | ||||||||
Type: | CODING | ||||||||
Position: |
|
||||||||
Sequence: |
RefSeq Acc Id: | XM_011511903 ⟹ XP_011510205 | ||||||||
Type: | CODING | ||||||||
Position: |
|
||||||||
Sequence: |
RefSeq Acc Id: | XM_024453157 ⟹ XP_024308925 | ||||||||
Type: | CODING | ||||||||
Position: |
|
||||||||
Sequence: |
RefSeq Acc Id: | XM_047445918 ⟹ XP_047301874 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054344035 ⟹ XP_054200010 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054344036 ⟹ XP_054200011 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054344037 ⟹ XP_054200012 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054344038 ⟹ XP_054200013 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054344039 ⟹ XP_054200014 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_054344040 ⟹ XP_054200015 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Protein RefSeqs | NP_001240804 | (Get FASTA) | NCBI Sequence Viewer |
NP_001240805 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001364433 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001364434 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001364435 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001364436 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001364437 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001364438 | (Get FASTA) | NCBI Sequence Viewer | |
NP_079352 | (Get FASTA) | NCBI Sequence Viewer | |
XP_011510204 | (Get FASTA) | NCBI Sequence Viewer | |
XP_011510205 | (Get FASTA) | NCBI Sequence Viewer | |
XP_024308925 | (Get FASTA) | NCBI Sequence Viewer | |
XP_047301874 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054200010 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054200011 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054200012 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054200013 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054200014 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054200015 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH09819 | (Get FASTA) | NCBI Sequence Viewer |
AAN39844 | (Get FASTA) | NCBI Sequence Viewer | |
AAQ88905 | (Get FASTA) | NCBI Sequence Viewer | |
AAY15085 | (Get FASTA) | NCBI Sequence Viewer | |
BAB15705 | (Get FASTA) | NCBI Sequence Viewer | |
BAC11415 | (Get FASTA) | NCBI Sequence Viewer | |
BAC11448 | (Get FASTA) | NCBI Sequence Viewer | |
BAF83357 | (Get FASTA) | NCBI Sequence Viewer | |
BAG53673 | (Get FASTA) | NCBI Sequence Viewer | |
BAG65609 | (Get FASTA) | NCBI Sequence Viewer | |
CAD39099 | (Get FASTA) | NCBI Sequence Viewer | |
CAF86373 | (Get FASTA) | NCBI Sequence Viewer | |
CAF86438 | (Get FASTA) | NCBI Sequence Viewer | |
EAX01747 | (Get FASTA) | NCBI Sequence Viewer | |
EAX01748 | (Get FASTA) | NCBI Sequence Viewer | |
EAX01749 | (Get FASTA) | NCBI Sequence Viewer | |
EAX01750 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSP00000283148 | ||
ENSP00000283148.7 | |||
ENSP00000387019 | |||
ENSP00000387019.3 | |||
ENSP00000387096 | |||
ENSP00000387096.1 | |||
ENSP00000397049.1 | |||
ENSP00000399316.1 | |||
ENSP00000403612.1 | |||
ENSP00000404468.1 | |||
ENSP00000416656.1 | |||
ENSP00000502305.1 | |||
ENSP00000502335.1 | |||
ENSP00000502540.1 | |||
GenBank Protein | Q8NBZ7 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_079352 ⟸ NM_025076 |
- Peptide Label: | isoform 2 |
- UniProtKB: | Q8NBX3 (UniProtKB/Swiss-Prot), Q9H5C2 (UniProtKB/Swiss-Prot), Q8NBZ7 (UniProtKB/Swiss-Prot), A8K3Q3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001240804 ⟸ NM_001253875 |
- Peptide Label: | isoform 1 |
- UniProtKB: | A8K3Q3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001240805 ⟸ NM_001253876 |
- Peptide Label: | isoform 3 |
- UniProtKB: | Q8NBZ7 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_011510205 ⟸ XM_011511903 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A8K3Q3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_011510204 ⟸ XM_011511902 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A8K3Q3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_024308925 ⟸ XM_024453157 |
- Peptide Label: | isoform X4 |
- Sequence: |
RefSeq Acc Id: | NP_001364434 ⟸ NM_001377505 |
- Peptide Label: | isoform 5 |
- UniProtKB: | A8K3Q3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001364437 ⟸ NM_001377508 |
- Peptide Label: | isoform 8 |
- UniProtKB: | A8K3Q3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001364433 ⟸ NM_001377504 |
- Peptide Label: | isoform 4 |
- UniProtKB: | A8K3Q3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001364436 ⟸ NM_001377507 |
- Peptide Label: | isoform 7 |
- UniProtKB: | A8K3Q3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001364435 ⟸ NM_001377506 |
- Peptide Label: | isoform 6 |
- UniProtKB: | A8K3Q3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | NP_001364438 ⟸ NM_001377509 |
- Peptide Label: | isoform 9 |
RefSeq Acc Id: | ENSP00000283148 ⟸ ENST00000283148 |
RefSeq Acc Id: | ENSP00000416656 ⟸ ENST00000441952 |
RefSeq Acc Id: | ENSP00000403612 ⟸ ENST00000416298 |
RefSeq Acc Id: | ENSP00000399316 ⟸ ENST00000457835 |
RefSeq Acc Id: | ENSP00000404468 ⟸ ENST00000444193 |
RefSeq Acc Id: | ENSP00000387096 ⟸ ENST00000409032 |
RefSeq Acc Id: | ENSP00000387019 ⟸ ENST00000409501 |
RefSeq Acc Id: | ENSP00000397049 ⟸ ENST00000436241 |
RefSeq Acc Id: | XP_047301874 ⟸ XM_047445918 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_054200011 ⟸ XM_054344036 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_054200010 ⟸ XM_054344035 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_054200014 ⟸ XM_054344039 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_054200013 ⟸ XM_054344038 |
- Peptide Label: | isoform X6 |
- UniProtKB: | B3KV61 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_054200012 ⟸ XM_054344037 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | XP_054200015 ⟸ XM_054344040 |
- Peptide Label: | isoform X4 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q8NBZ7-F1-model_v2 | AlphaFold | Q8NBZ7 | 1-420 | view protein structure |
RGD ID: | 6798429 | ||||||||
Promoter ID: | HG_KWN:34285 | ||||||||
Type: | Non-CpG | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell | ||||||||
Transcripts: | OTTHUMT00000329789 | ||||||||
Position: |
|
RGD ID: | 6798430 | ||||||||
Promoter ID: | HG_KWN:34286 | ||||||||
Type: | Non-CpG | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour | ||||||||
Transcripts: | OTTHUMT00000329788, UC002TDL.1 | ||||||||
Position: |
|
RGD ID: | 6798425 | ||||||||
Promoter ID: | HG_KWN:34287 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, Lymphoblastoid, NB4 | ||||||||
Transcripts: | OTTHUMT00000329783, OTTHUMT00000329784, OTTHUMT00000329785, OTTHUMT00000329786 | ||||||||
Position: |
|
RGD ID: | 6798426 | ||||||||
Promoter ID: | HG_KWN:34290 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4 | ||||||||
Transcripts: | ENST00000409501, NM_025076, OTTHUMT00000329781, OTTHUMT00000329782, OTTHUMT00000329787, UC002TDO.1 | ||||||||
Position: |
|
RGD ID: | 6861252 | ||||||||
Promoter ID: | EPDNEW_H3791 | ||||||||
Type: | initiation region | ||||||||
Name: | UXS1_1 | ||||||||
Description: | UDP-glucuronate decarboxylase 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | HGNC:17729 | AgrOrtholog |
COSMIC | UXS1 | COSMIC |
Ensembl Genes | ENSG00000115652 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENST00000283148 | ENTREZGENE |
ENST00000283148.12 | UniProtKB/Swiss-Prot | |
ENST00000409032 | ENTREZGENE | |
ENST00000409032.5 | UniProtKB/Swiss-Prot | |
ENST00000409501 | ENTREZGENE | |
ENST00000409501.7 | UniProtKB/Swiss-Prot | |
ENST00000416298.5 | UniProtKB/TrEMBL | |
ENST00000436241.1 | UniProtKB/TrEMBL | |
ENST00000441952.5 | UniProtKB/TrEMBL | |
ENST00000444193.5 | UniProtKB/TrEMBL | |
ENST00000457835.5 | UniProtKB/TrEMBL | |
ENST00000479621.5 | UniProtKB/TrEMBL | |
ENST00000479774.5 | UniProtKB/TrEMBL | |
ENST00000483426.5 | UniProtKB/TrEMBL | |
Gene3D-CATH | NAD(P)-binding Rossmann-like Domain | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UDP-galactose 4-epimerase, domain 1 | UniProtKB/TrEMBL | |
GTEx | ENSG00000115652 | GTEx |
HGNC ID | HGNC:17729 | ENTREZGENE |
Human Proteome Map | UXS1 | Human Proteome Map |
InterPro | Epimerase_deHydtase_N | UniProtKB/TrEMBL |
NAD(P)-bd_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
NAD(P)-bd_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UXS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UXS1_N | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | hsa:80146 | UniProtKB/Swiss-Prot |
NCBI Gene | 80146 | ENTREZGENE |
OMIM | 609749 | OMIM |
PANTHER | PTHR43078 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UDP-GLUCURONIC ACID DECARBOXYLASE 1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | Epimerase | UniProtKB/TrEMBL |
GDP_Man_Dehyd | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UXS1_N | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PharmGKB | PA38465 | PharmGKB |
Superfamily-SCOP | SSF51735 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A6Q8PGM4_HUMAN | UniProtKB/TrEMBL |
A0A6Q8PGN2_HUMAN | UniProtKB/TrEMBL | |
A0A6Q8PH60_HUMAN | UniProtKB/TrEMBL | |
A8K3Q3 | ENTREZGENE, UniProtKB/TrEMBL | |
B3KV61 | ENTREZGENE, UniProtKB/TrEMBL | |
C9J3T9_HUMAN | UniProtKB/TrEMBL | |
C9JCB7_HUMAN | UniProtKB/TrEMBL | |
C9JE50_HUMAN | UniProtKB/TrEMBL | |
C9JFU6_HUMAN | UniProtKB/TrEMBL | |
C9JW33_HUMAN | UniProtKB/TrEMBL | |
Q8NBX3 | ENTREZGENE | |
Q8NBZ7 | ENTREZGENE | |
Q9H5C2 | ENTREZGENE | |
UXS1_HUMAN | UniProtKB/Swiss-Prot | |
UniProt Secondary | Q8NBX3 | UniProtKB/Swiss-Prot |
Q9H5C2 | UniProtKB/Swiss-Prot |