RGS14 (regulator of G protein signaling 14) - Rat Genome Database

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Gene: RGS14 (regulator of G protein signaling 14) Homo sapiens
Analyze
Symbol: RGS14
Name: regulator of G protein signaling 14
RGD ID: 733515
HGNC Page HGNC:9996
Description: Enables GDP-dissociation inhibitor activity; GTPase activator activity; and microtubule binding activity. Involved in cell division and spindle organization. Located in spindle. Implicated in nephrolithiasis.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: regulator of G-protein signaling 14; regulator of G-protein signalling 14
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385177,357,924 - 177,372,596 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5177,357,924 - 177,372,596 (+)EnsemblGRCh38hg38GRCh38
GRCh375176,784,925 - 176,799,597 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365176,717,450 - 176,732,205 (+)NCBINCBI36Build 36hg18NCBI36
Build 345176,717,449 - 176,732,204NCBI
Celera5171,701,669 - 171,716,413 (-)NCBICelera
Cytogenetic Map5q35.3NCBI
HuRef5171,705,499 - 171,720,237 (+)NCBIHuRef
CHM1_15176,217,893 - 176,232,649 (+)NCBICHM1_1
T2T-CHM13v2.05177,901,146 - 177,915,812 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
RGS14Humannephrolithiasis  IAGP 7242927DNA:SNP: :rs11746443 (human)RGD 
Object Symbol
Species
Term
Qualifier
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Reference
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Original Reference(s)
RGS14HumanChromosome 5, Trisomy 5q  IAGPRGD:1552689418554872ClinVar Annotator: match by term: 5q35 microduplication syndromeClinVarPMID:31690835
RGS14HumanEhlers-Danlos syndrome dermatosparaxis type  IAGPRGD:1564397168554872ClinVar Annotator: match by term: Ehlers-Danlos syndrome, dermatosparaxis typeClinVarPMID:16770806|PMID:17090394|PMID:21567906|PMID:23599694|PMID:23913520|PMID:24819041|PMID:28128410|PMID:28492532|PMID:33389145
RGS14HumanEhlers-Danlos syndrome spondylodysplastic type 2  IAGPRGD:1517951538554872ClinVar Annotator: match by term: Ehlers-Danlos syndrome progeroid typeClinVarPMID:28492532
RGS14HumanMarfanoid Mental Retardation Syndrome, Autosomal  IAGPRGD:149771818554872ClinVar Annotator: match by term: Marfanoid habitus and intellectual disabilityClinVarPMID:25741868
RGS14HumanSilver-Russell syndrome  IAGPRGD:4075728898554872ClinVar Annotator: match by term: Russell-Silver syndromeClinVarPMID:27172843
RGS14HumanSotos syndrome  IAGPRGD:1564381718554872ClinVar Annotator: match by term: Sotos syndromeClinVarPMID:12464997|PMID:14571271|PMID:15942875|PMID:16247291|PMID:18505455|PMID:21597970|PMID:25608832|PMID:26047794|PMID:28492532
RGS14HumanSotos syndrome  IAGPRGD:1564397168554872ClinVar Annotator: match by term: Sotos syndromeClinVarPMID:16770806|PMID:17090394|PMID:21567906|PMID:23599694|PMID:23913520|PMID:24819041|PMID:28128410|PMID:28492532|PMID:33389145
RGS14HumanSotos syndrome  IAGPRGD:1564414418554872ClinVar Annotator: match by term: Sotos syndromeClinVarPMID:28492532

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Object Symbol
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Original Reference(s)
RGS14Human1,2-dimethylhydrazine increases expressionISORGD:73351664804641,2-Dimethylhydrazine results in increased expression of RGS14 mRNACTDPMID:22206623
RGS14Human17beta-estradiol multiple interactionsISORGD:6200036480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of RGS14 mRNACTDPMID:32741896
RGS14Human17beta-estradiol 3-benzoate multiple interactionsISORGD:6200036480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of RGS14 mRNACTDPMID:32741896
RGS14Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:6200036480464Tetrachlorodibenzodioxin results in increased expression of RGS14 mRNACTDPMID:33387578
RGS14Human3,3',5,5'-tetrabromobisphenol A decreases expressionISORGD:7335166480464tetrabromobisphenol A results in decreased expression of RGS14 mRNACTDPMID:25172293
RGS14Human4,4'-diaminodiphenylmethane decreases expressionISORGD:73351664804644,4'-diaminodiphenylmethane results in decreased expression of RGS14 mRNACTDPMID:18648102
RGS14Human4,4'-sulfonyldiphenol decreases methylationISORGD:7335166480464bisphenol S results in decreased methylation of RGS14 exonCTDPMID:33297965
RGS14Human4,4'-sulfonyldiphenol multiple interactionsISORGD:6200036480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of more ...CTDPMID:36041667
RGS14Human6-propyl-2-thiouracil increases expressionISORGD:6200036480464Propylthiouracil results in increased expression of RGS14 mRNACTDPMID:24780913
RGS14Humanacetamide increases expressionISORGD:6200036480464acetamide results in increased expression of RGS14 mRNACTDPMID:31881176
RGS14Humanalpha-Zearalanol increases expressionISORGD:6200036480464Zeranol results in increased expression of RGS14 mRNACTDPMID:35163327
RGS14Humanamitrole decreases expressionISORGD:6200036480464Amitrole results in decreased expression of RGS14 mRNACTDPMID:38685447
RGS14Humanammonium chloride affects expressionISORGD:6200036480464Ammonium Chloride affects the expression of RGS14 mRNACTDPMID:16483693
RGS14Humanarsenite(3-) increases expressionISORGD:7335166480464arsenite results in increased expression of RGS14 mRNACTDPMID:33053406
RGS14Humanatrazine increases expressionEXP 6480464Atrazine results in increased expression of RGS14 mRNACTDPMID:22378314
RGS14Humanbenzo[a]pyrene affects methylationEXP 6480464Benzo(a)pyrene affects the methylation of RGS14 5' UTR; Benzo(a)pyrene affects the methylation of RGS14 promoterCTDPMID:27901495
RGS14Humanbenzo[a]pyrene decreases expressionEXP 6480464Benzo(a)pyrene results in decreased expression of RGS14 mRNACTDPMID:32234424
RGS14Humanbisphenol A decreases expressionISORGD:6200036480464bisphenol A results in decreased expression of RGS14 mRNACTDPMID:25181051|PMID:30816183|PMID:32528016|PMID:34947998
RGS14Humanbisphenol A multiple interactionsISORGD:6200036480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of more ...CTDPMID:36041667
RGS14Humanbisphenol A increases expressionISORGD:7335166480464bisphenol A results in increased expression of RGS14 mRNACTDPMID:38701888

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Biological Process
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Original Reference(s)
RGS14Humancell division involved_inIMP 150520179 PMID:17635935UniProtPMID:17635935
RGS14Humancell division involved_inIEAUniProtKB-KW:KW-0132150520179 UniProtGO_REF:0000043
RGS14Humancell division involved_inIBAMGI:1859709|PANTHER:PTN002914935|UniProtKB:O43566150520179 GO_CentralGO_REF:0000033
RGS14Humanchromosome segregation involved_inIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14Humanchromosome segregation involved_inISSUniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14HumanG protein-coupled receptor signaling pathway involved_inTAS 150520179 ReactomeReactome:R-HSA-388396
RGS14Humanlearning involved_inISSUniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14Humanlearning involved_inIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14Humanlong-term memory involved_inISSUniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14Humanlong-term memory involved_inIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14Humanlong-term synaptic potentiation involved_inISSUniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14Humanlong-term synaptic potentiation involved_inIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14Humanmitotic cell cycle acts_upstream_of_or_withinIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14Humanmodulation of chemical synaptic transmission involved_inIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14Humannegative regulation of ERK1 and ERK2 cascade involved_inIEAUniProtKB:O08773|ensembl:ENSRNOP00000021596150520179 EnsemblGO_REF:0000107
RGS14Humannegative regulation of ERK1 and ERK2 cascade involved_inISSUniProtKB:O08773150520179 UniProtGO_REF:0000024
RGS14Humannegative regulation of G protein-coupled receptor signaling pathway involved_inISSUniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14Humannegative regulation of G protein-coupled receptor signaling pathway involved_inIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14Humannegative regulation of MAP kinase activity involved_inISSUniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14Humannegative regulation of signal transduction involved_inIEAUniProtKB-KW:KW-0734150520179 UniProtGO_REF:0000043
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Cellular Component
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Original Reference(s)
RGS14Humancell projection located_inIEAUniProtKB-KW:KW-0966150520179 UniProtGO_REF:0000043
RGS14Humancentrosome located_inIEAUniProtKB-SubCell:SL-0048150520179 UniProtGO_REF:0000044
RGS14Humancentrosome located_inIEAUniProtKB:O08773|UniProtKB:P97492|ensembl:ENSMUSP00000068731|ensembl:ENSRNOP00000021596150520179 EnsemblGO_REF:0000107
RGS14Humancentrosome located_inISSUniProtKB:O08773|UniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14Humancytoplasm located_inISSUniProtKB:O08773|UniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
RGS14Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
RGS14Humancytoplasm located_inIEAUniProtKB:O08773|UniProtKB:P97492|ensembl:ENSMUSP00000068731|ensembl:ENSRNOP00000021596150520179 EnsemblGO_REF:0000107
RGS14Humancytoplasm is_active_inIBAFB:FBgn0020278|MGI:1859709|PANTHER:PTN000851567|RGD:3564|RGD:620003|UniProtKB:O14924150520179 GO_CentralGO_REF:0000033
RGS14Humancytoskeleton located_inIEAUniProtKB-KW:KW-0206150520179 UniProtGO_REF:0000043
RGS14Humandendrite  ISORGD:6200039068941 RGDPMID:16819986|REF_RGD_ID:7207381
RGS14Humandendrite located_inISSUniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14Humandendrite located_inIEAUniProtKB-SubCell:SL-0283150520179 UniProtGO_REF:0000044
RGS14Humandendrite located_inIEAUniProtKB:O08773|UniProtKB:P97492|ensembl:ENSMUSP00000068731|ensembl:ENSRNOP00000021596150520179 EnsemblGO_REF:0000107
RGS14Humandendritic spine located_inIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14Humandendritic spine located_inISSUniProtKB:P97492150520179 UniProtGO_REF:0000024
RGS14Humandendritic spine located_inIEAUniProtKB-SubCell:SL-0284150520179 UniProtGO_REF:0000044
RGS14Humanglutamatergic synapse is_active_inIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14Humanmembrane located_inIEAUniProtKB-SubCell:SL-0162150520179 UniProtGO_REF:0000044
RGS14Humanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
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Molecular Function
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Original Reference(s)
RGS14HumanG-protein alpha-subunit binding  ISORGD:27149068941 RGDPMID:11387333|REF_RGD_ID:7207387
RGS14HumanG-protein alpha-subunit binding enablesIEAInterPro:IPR037881150520179 InterProGO_REF:0000002
RGS14HumanG-protein alpha-subunit binding enablesIEAUniProtKB:O08773|ensembl:ENSRNOP00000021596150520179 EnsemblGO_REF:0000107
RGS14HumanGDP-dissociation inhibitor activity enablesIDA 150520179 PMID:15917656UniProtPMID:15917656
RGS14HumanGDP-dissociation inhibitor activity enablesIEAUniProtKB:O08773|ensembl:ENSRNOP00000021596150520179 EnsemblGO_REF:0000107
RGS14HumanGTPase activating protein binding enablesIEAUniProtKB:P97492|ensembl:ENSMUSP00000068731150520179 EnsemblGO_REF:0000107
RGS14HumanGTPase activator activity enablesIDA 150520179 PMID:15917656UniProtPMID:15917656
RGS14HumanGTPase activator activity enablesIBAFB:FBgn0020278|MGI:1859709|PANTHER:PTN000851567|RGD:3564|RGD:620003|UniProtKB:O43566150520179 GO_CentralGO_REF:0000033
RGS14HumanGTPase activator activity enablesIEAInterPro:IPR046995150520179 InterProGO_REF:0000002
RGS14HumanGTPase activator activity enablesTAS 150520179 PMID:9168931PINCPMID:9168931
RGS14HumanGTPase activator activity enablesIEAUniProtKB:O08773|UniProtKB:P97492|ensembl:ENSMUSP00000068731|ensembl:ENSRNOP00000021596150520179 EnsemblGO_REF:0000107
RGS14HumanGTPase activator activity enablesIEAUniProtKB-KW:KW-0343150520179 UniProtGO_REF:0000043
RGS14HumanGTPase activity enablesTAS 150520179 ReactomeReactome:R-HSA-8982020
RGS14HumanGTPase regulator activity enablesIEAARBA:ARBA00026642150520179 UniProtGO_REF:0000117
RGS14HumanGTPase regulator activity enablesIEAInterPro:IPR003109150520179 InterProGO_REF:0000002
RGS14Humanmicrotubule binding enablesIDA 150520179 PMID:15917656UniProtPMID:15917656
RGS14Humanmicrotubule binding enablesIEAInterPro:IPR037881150520179 InterProGO_REF:0000002
RGS14Humanprotein binding enablesIPIUniProtKB:P08754150520179 PMID:32296183IntActPMID:32296183
RGS14Humanprotein binding enablesIPIUniProtKB:Q9BSI4150520179 PMID:21044950IntActPMID:21044950
RGS14Humanprotein binding enablesIPIUniProtKB:P08754|UniProtKB:P63096150520179 PMID:21988832, PMID:33961781IntActPMID:21988832|PMID:33961781
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Object Symbol
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Original Reference(s)
RGS14HumanDecreased glomerular filtration rate  IAGP 7242927DNA:SNP: :rs11746443RGD 

#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. A genome-wide association study of nephrolithiasis in the Japanese population identifies novel susceptible Loci at 5q35.3, 7p14.3, and 13q14.1. Urabe Y, etal., PLoS Genet. 2012;8(3):e1002541. doi: 10.1371/journal.pgen.1002541. Epub 2012 Mar 1.
PMID:9168931   PMID:10926822   PMID:10953050   PMID:11387333   PMID:11829488   PMID:11976690   PMID:12477932   PMID:12534294   PMID:14702039   PMID:15489334   PMID:15525537   PMID:15917656  
PMID:16189514   PMID:17603074   PMID:17635935   PMID:18029348   PMID:19636837   PMID:19878719   PMID:19899154   PMID:20383146   PMID:20627871   PMID:20842066   PMID:21044950   PMID:21832049  
PMID:21833088   PMID:21873635   PMID:21880739   PMID:21988832   PMID:22379092   PMID:22703881   PMID:22797727   PMID:22807448   PMID:23128233   PMID:23255434   PMID:24068962   PMID:26186194  
PMID:26987813   PMID:28298427   PMID:28514442   PMID:28776200   PMID:30217807   PMID:30945288   PMID:31754202   PMID:32296183   PMID:32665550   PMID:33309307   PMID:33410399   PMID:33961781  
PMID:35013429   PMID:35307350   PMID:35575683   PMID:36541898   PMID:37071682   PMID:38237897   PMID:39293332  



RGS14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385177,357,924 - 177,372,596 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5177,357,924 - 177,372,596 (+)EnsemblGRCh38hg38GRCh38
GRCh375176,784,925 - 176,799,597 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365176,717,450 - 176,732,205 (+)NCBINCBI36Build 36hg18NCBI36
Build 345176,717,449 - 176,732,204NCBI
Celera5171,701,669 - 171,716,413 (-)NCBICelera
Cytogenetic Map5q35.3NCBI
HuRef5171,705,499 - 171,720,237 (+)NCBIHuRef
CHM1_15176,217,893 - 176,232,649 (+)NCBICHM1_1
T2T-CHM13v2.05177,901,146 - 177,915,812 (+)NCBIT2T-CHM13v2.0
Rgs14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391355,517,269 - 55,532,504 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1355,517,545 - 55,532,500 (+)EnsemblGRCm39 Ensembl
GRCm381355,369,732 - 55,384,687 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1355,369,732 - 55,384,687 (+)EnsemblGRCm38mm10GRCm38
MGSCv371355,471,093 - 55,486,048 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361354,849,935 - 54,864,851 (+)NCBIMGSCv36mm8
MGSCv361355,379,393 - 55,394,309 (+)NCBIMGSCv36mm8
Cytogenetic Map13B1NCBI
cM Map1329.8NCBI
Rgs14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8179,254,112 - 9,268,233 (-)NCBIGRCr8
mRatBN7.2179,248,982 - 9,263,104 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl179,249,019 - 9,263,104 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx179,265,278 - 9,279,405 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01710,795,224 - 10,809,305 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0179,261,669 - 9,275,796 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0179,777,925 - 9,792,007 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl179,777,842 - 9,792,007 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01711,887,270 - 11,901,352 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41715,293,100 - 15,307,162 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11715,293,099 - 15,307,162 (-)NCBI
Celera179,327,534 - 9,341,623 (-)NCBICelera
Cytogenetic Map17p14NCBI
Rgs14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540829,602,820 - 29,616,210 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540829,602,654 - 29,616,793 (+)NCBIChiLan1.0ChiLan1.0
RGS14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24172,441,892 - 172,456,648 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15170,581,431 - 170,596,187 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05172,659,323 - 172,674,084 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15179,721,876 - 179,736,608 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5179,721,876 - 179,739,453 (+)Ensemblpanpan1.1panPan2
RGS14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1435,984,970 - 35,999,386 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl435,985,132 - 35,999,294 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha435,952,393 - 35,966,792 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0436,351,200 - 36,365,605 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl436,310,038 - 36,365,601 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1436,176,431 - 36,190,828 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0436,362,626 - 36,377,029 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0436,871,876 - 36,886,282 (-)NCBIUU_Cfam_GSD_1.0
Rgs14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213122,617,771 - 122,633,949 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365971,643,616 - 1,658,638 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365971,650,480 - 1,658,823 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RGS14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl280,574,415 - 80,590,003 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1280,574,411 - 80,589,998 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2282,278,839 - 82,294,432 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RGS14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12379,370,320 - 79,385,355 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2379,370,087 - 79,387,192 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607510,559,155 - 10,573,950 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rgs14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473312,707,825 - 12,723,279 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473312,705,392 - 12,722,919 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in RGS14
57 total Variants

1 to 10 of 129 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 5q35.2-35.3(chr5:176132340-177586960)x1 copy number loss See cases [RCV000050645] Chr5:176132340..177586960 [GRCh38]
Chr5:175559343..177013961 [GRCh37]
Chr5:175491949..176946567 [NCBI36]
Chr5:5q35.2-35.3
pathogenic
GRCh38/hg38 5q32-35.3(chr5:149714592-181272151)x3 copy number gain See cases [RCV000051863] Chr5:149714592..181272151 [GRCh38]
Chr5:149094155..180699152 [GRCh37]
Chr5:149074348..180631758 [NCBI36]
Chr5:5q32-35.3
pathogenic
GRCh38/hg38 5q33.3-35.3(chr5:160029980-181269805)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051865]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051865]|See cases [RCV000051865] Chr5:160029980..181269805 [GRCh38]
Chr5:159456987..180696806 [GRCh37]
Chr5:159389565..180629412 [NCBI36]
Chr5:5q33.3-35.3
pathogenic
GRCh38/hg38 5q34-35.3(chr5:168689326-181269946)x3 copy number gain See cases [RCV000051866] Chr5:168689326..181269946 [GRCh38]
Chr5:168116331..180696947 [GRCh37]
Chr5:168048909..180629553 [NCBI36]
Chr5:5q34-35.3
pathogenic
GRCh38/hg38 5q35.2-35.3(chr5:175851047-178365049)x3 copy number gain See cases [RCV000051867] Chr5:175851047..178365049 [GRCh38]
Chr5:175278050..177792050 [GRCh37]
Chr5:175210656..177724656 [NCBI36]
Chr5:5q35.2-35.3
pathogenic
GRCh38/hg38 5q35.2-35.3(chr5:175889986-180793986)x3 copy number gain See cases [RCV000051868] Chr5:175889986..180793986 [GRCh38]
Chr5:175316989..180220986 [GRCh37]
Chr5:175249595..180153592 [NCBI36]
Chr5:5q35.2-35.3
pathogenic
GRCh38/hg38 5q35.2-35.3(chr5:175007241-179089812)x1 copy number loss See cases [RCV000052151] Chr5:175007241..179089812 [GRCh38]
Chr5:174434244..178516813 [GRCh37]
Chr5:174366850..178449419 [NCBI36]
Chr5:5q35.2-35.3
pathogenic
GRCh38/hg38 5q35.2-35.3(chr5:176043476-177995759)x1 copy number loss See cases [RCV000053127] Chr5:176043476..177995759 [GRCh38]
Chr5:175470479..177422760 [GRCh37]
Chr5:175403085..177355366 [NCBI36]
Chr5:5q35.2-35.3
pathogenic
GRCh38/hg38 5q35.2-35.3(chr5:176115257-177646633)x1 copy number loss See cases [RCV000053128] Chr5:176115257..177646633 [GRCh38]
Chr5:175542260..177073634 [GRCh37]
Chr5:175474866..177006240 [NCBI36]
Chr5:5q35.2-35.3
pathogenic
GRCh38/hg38 5q35.2-35.3(chr5:176152073-177986213)x1 copy number loss See cases [RCV000053129] Chr5:176152073..177986213 [GRCh38]
Chr5:175579076..177413214 [GRCh37]
Chr5:175511682..177345820 [NCBI36]
Chr5:5q35.2-35.3
pathogenic
1 to 10 of 129 rows

Predicted Target Of
Summary Value
Count of predictions:4156
Count of miRNA genes:952
Interacting mature miRNAs:1207
Transcripts:ENST00000408923, ENST00000425155, ENST00000502731, ENST00000503044, ENST00000503110, ENST00000504631, ENST00000506944, ENST00000509289, ENST00000511890, ENST00000512000, ENST00000512490, ENST00000514102, ENST00000514713
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 64 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
596978197GWAS1097716_Hglomerular filtration rate QTL GWAS1097716 (human)6e-17glomerular filtration rate5177370342177370343Human
596976276GWAS1095795_Hblood urea nitrogen measurement QTL GWAS1095795 (human)0.000008blood urea nitrogen measurement5177367190177367191Human
596978196GWAS1097715_Hglomerular filtration rate QTL GWAS1097715 (human)4e-12glomerular filtration rate5177367190177367191Human
596978199GWAS1097718_Hglomerular filtration rate QTL GWAS1097718 (human)8e-17glomerular filtration rate5177371305177371306Human
596978198GWAS1097717_Hglomerular filtration rate QTL GWAS1097717 (human)1e-14glomerular filtration rate5177371069177371071Human
597601181GWAS1658041_Hblood urea nitrogen measurement QTL GWAS1658041 (human)1e-20blood urea nitrogen measurementblood urea nitrogen level (CMO:0000049)5177371305177371306Human
597028243GWAS1124317_Hblood urea nitrogen measurement QTL GWAS1124317 (human)1e-19blood urea nitrogen measurementblood urea nitrogen level (CMO:0000049)5177361569177361570Human
596978195GWAS1097714_Hglomerular filtration rate QTL GWAS1097714 (human)6e-17glomerular filtration rate5177365742177365743Human
597224735GWAS1320809_Hcystatin C measurement QTL GWAS1320809 (human)7e-72cystatin C measurementblood cystatin C level (CMO:0002777)5177367190177367191Human
597257246GWAS1353320_Hurate measurement QTL GWAS1353320 (human)2e-11urate measurementblood uric acid level (CMO:0000501)5177367190177367191Human

1 to 10 of 64 rows
D5S1624E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375176,799,485 - 176,799,564UniSTSGRCh37
Build 365176,732,091 - 176,732,170RGDNCBI36
Celera5171,701,704 - 171,701,783RGD
Cytogenetic Map5q35.3UniSTS
HuRef5171,720,123 - 171,720,202UniSTS
GeneMap99-GB4 RH Map5636.91UniSTS
NCBI RH Map5973.0UniSTS
RGS14_3061  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375176,798,945 - 176,799,570UniSTSGRCh37
Build 365176,731,551 - 176,732,176RGDNCBI36
Celera5171,701,698 - 171,702,323RGD
HuRef5171,719,583 - 171,720,208UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2432 2788 2245 4953 1723 2348 4 623 1949 465 2269 7288 6459 53 3717 850 1739 1613 174 1


1 to 20 of 20 rows
RefSeq Transcripts NM_001366617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001366618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054351449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054351450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC146507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF037194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF037195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF493936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI623584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK098150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK123382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY987041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC014094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI752372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 20 of 20 rows

Ensembl Acc Id: ENST00000408923   ⟹   ENSP00000386229
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,357,924 - 177,372,596 (+)Ensembl
Ensembl Acc Id: ENST00000425155
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,367,314 - 177,372,596 (+)Ensembl
Ensembl Acc Id: ENST00000502731
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,370,553 - 177,371,578 (+)Ensembl
Ensembl Acc Id: ENST00000503044
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,371,107 - 177,372,143 (+)Ensembl
Ensembl Acc Id: ENST00000503110
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,367,217 - 177,368,888 (+)Ensembl
Ensembl Acc Id: ENST00000504631
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,366,428 - 177,367,557 (+)Ensembl
Ensembl Acc Id: ENST00000506944
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,371,113 - 177,372,166 (+)Ensembl
Ensembl Acc Id: ENST00000509289
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,371,066 - 177,371,582 (+)Ensembl
Ensembl Acc Id: ENST00000511890   ⟹   ENSP00000422329
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,366,943 - 177,372,298 (+)Ensembl
Ensembl Acc Id: ENST00000512000
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,367,302 - 177,368,016 (+)Ensembl
Ensembl Acc Id: ENST00000512490
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,367,303 - 177,368,804 (+)Ensembl
Ensembl Acc Id: ENST00000514102
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,370,821 - 177,372,292 (+)Ensembl
Ensembl Acc Id: ENST00000514713
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5177,366,943 - 177,369,075 (+)Ensembl
RefSeq Acc Id: NM_001366617   ⟹   NP_001353546
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385177,357,924 - 177,372,596 (+)NCBI
T2T-CHM13v2.05177,901,146 - 177,915,812 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001366618   ⟹   NP_001353547
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385177,357,924 - 177,372,596 (+)NCBI
T2T-CHM13v2.05177,901,146 - 177,915,812 (+)NCBI
Sequence:
RefSeq Acc Id: NM_006480   ⟹   NP_006471
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385177,357,924 - 177,372,596 (+)NCBI
GRCh375176,784,704 - 176,799,599 (+)NCBI
Build 365176,717,450 - 176,732,205 (+)NCBI Archive
HuRef5171,705,499 - 171,720,237 (+)ENTREZGENE
CHM1_15176,217,893 - 176,232,649 (+)NCBI
T2T-CHM13v2.05177,901,146 - 177,915,812 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047416638   ⟹   XP_047272594
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385177,357,924 - 177,372,596 (+)NCBI
RefSeq Acc Id: XM_047416639   ⟹   XP_047272595
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385177,363,053 - 177,372,596 (+)NCBI
RefSeq Acc Id: XM_054351449   ⟹   XP_054207424
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.05177,901,146 - 177,915,812 (+)NCBI
RefSeq Acc Id: XM_054351450   ⟹   XP_054207425
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.05177,906,275 - 177,915,812 (+)NCBI
RefSeq Acc Id: NP_006471   ⟸   NM_006480
- Peptide Label: isoform 1
- UniProtKB: Q6ZWA4 (UniProtKB/Swiss-Prot),   Q506M1 (UniProtKB/Swiss-Prot),   O43565 (UniProtKB/Swiss-Prot),   Q8TD62 (UniProtKB/Swiss-Prot),   O43566 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001353546   ⟸   NM_001366617
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001353547   ⟸   NM_001366618
- Peptide Label: isoform 3
Ensembl Acc Id: ENSP00000422329   ⟸   ENST00000511890
Ensembl Acc Id: ENSP00000386229   ⟸   ENST00000408923
GoLoco   RBD   RGS

Name Modeler Protein Id AA Range Protein Structure
AF-O43566-F1-model_v2 AlphaFold O43566 1-566 view protein structure

RGD ID:6803504
Promoter ID:HG_KWN:51901
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000336477,   ENST00000398128,   NM_006480
Position:
Human AssemblyChrPosition (strand)Source
Build 365176,717,139 - 176,717,639 (+)MPROMDB
RGD ID:6803505
Promoter ID:HG_KWN:51902
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:UC003MGG.1,   UC003MGH.1,   UC003MGI.1
Position:
Human AssemblyChrPosition (strand)Source
Build 365176,727,571 - 176,728,071 (+)MPROMDB
RGD ID:6803506
Promoter ID:HG_KWN:51903
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid
Transcripts:UC003MGJ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 365176,730,341 - 176,731,087 (+)MPROMDB
RGD ID:6871696
Promoter ID:EPDNEW_H9013
Type:multiple initiation site
Name:RGS14_3
Description:regulator of G protein signaling 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H9014  EPDNEW_H9015  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh385177,357,658 - 177,357,718EPDNEW
RGD ID:6871698
Promoter ID:EPDNEW_H9014
Type:initiation region
Name:RGS14_1
Description:regulator of G protein signaling 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H9013  EPDNEW_H9015  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh385177,357,924 - 177,357,984EPDNEW
RGD ID:6871700
Promoter ID:EPDNEW_H9015
Type:initiation region
Name:RGS14_2
Description:regulator of G protein signaling 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H9013  EPDNEW_H9014  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh385177,366,866 - 177,366,926EPDNEW


1 to 40 of 51 rows
Database
Acc Id
Source(s)
COSMIC RGS14 COSMIC
Ensembl Genes ENSG00000169220 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000408923 ENTREZGENE
  ENST00000408923.8 UniProtKB/Swiss-Prot
  ENST00000511890 ENTREZGENE
Gene3D-CATH 1.10.167.10 UniProtKB/Swiss-Prot
  1.10.196.10 UniProtKB/Swiss-Prot
  Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1 UniProtKB/Swiss-Prot
GTEx ENSG00000169220 GTEx
HGNC ID HGNC:9996 ENTREZGENE
Human Proteome Map RGS14 Human Proteome Map
InterPro GoLoco_motif UniProtKB/Swiss-Prot
  RBD1_RGS14 UniProtKB/Swiss-Prot
  RBD2_RGS14 UniProtKB/Swiss-Prot
  RBD_dom UniProtKB/Swiss-Prot
  RGS UniProtKB/Swiss-Prot
  RGS10/12/14-like UniProtKB/Swiss-Prot
  RGS14_RGS UniProtKB/Swiss-Prot
  RGS_sf UniProtKB/Swiss-Prot
  RGS_subdom1/3 UniProtKB/Swiss-Prot
  RGS_subdomain_2 UniProtKB/Swiss-Prot
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot
KEGG Report hsa:10636 UniProtKB/Swiss-Prot
NCBI Gene 10636 ENTREZGENE
OMIM 602513 OMIM
PANTHER PTHR45945:SF2 UniProtKB/Swiss-Prot
  REGULATOR OF G-PROTEIN SIGNALING LOCO UniProtKB/Swiss-Prot
Pfam GoLoco UniProtKB/Swiss-Prot
  RBD UniProtKB/Swiss-Prot
  RGS UniProtKB/Swiss-Prot
PharmGKB PA34366 PharmGKB
PRINTS RGSPROTEIN UniProtKB/Swiss-Prot
PROSITE GOLOCO UniProtKB/Swiss-Prot
  RBD UniProtKB/Swiss-Prot
  RGS UniProtKB/Swiss-Prot
SMART GoLoco UniProtKB/Swiss-Prot
  RBD UniProtKB/Swiss-Prot
  RGS UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48097 UniProtKB/Swiss-Prot
  SSF54236 UniProtKB/Swiss-Prot
1 to 40 of 51 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-04-18 RGS14  regulator of G protein signaling 14  RGS14  regulator of G-protein signaling 14  Symbol and/or name change 5135510 APPROVED