TALDO1 (transaldolase 1) - Rat Genome Database

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Gene: TALDO1 (transaldolase 1) Homo sapiens
Analyze
Symbol: TALDO1
Name: transaldolase 1
RGD ID: 733188
HGNC Page HGNC:11559
Description: Enables transaldolase activity. Involved in pentose-phosphate shunt, non-oxidative branch. Located in cytosol. Implicated in carbohydrate metabolic disorder.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: dihydroxyacetone transferase; glycerone transferase; TAL; TAL-H; TALDOR; TALH; testicular secretory protein Li 56; transaldolase
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: TALDO1P1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811747,464 - 765,012 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11747,415 - 765,012 (+)EnsemblGRCh38hg38GRCh38
GRCh3711747,464 - 765,012 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3611737,432 - 755,024 (+)NCBINCBI36Build 36hg18NCBI36
Build 3411737,431 - 755,023NCBI
Celera11815,308 - 828,130 (+)NCBICelera
Cytogenetic Map11p15.5NCBI
HuRef11564,412 - 581,950 (+)NCBIHuRef
CHM1_111746,369 - 763,851 (+)NCBICHM1_1
T2T-CHM13v2.011798,942 - 816,524 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
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Original Reference(s)
TALDO1Humancarbohydrate metabolic disorder  IAGP 1599293Transaldolase deficiency and OMIM:606003RGD 
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Original Reference(s)
TALDO1HumanBeckwith-Wiedemann syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Beckwith-Wiedemann syndromeClinVarPMID:21910219 more ...
TALDO1Humancataract  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: CataractClinVarPMID:25741868 and PMID:28492532
TALDO1HumanChanarin-Dorfman syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neutral lipid storage myopathyClinVarPMID:28492532
TALDO1HumanCostello syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Costello syndromeClinVarPMID:28492532
TALDO1Humandelta beta-thalassemia  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Thalassemia and gamma-delta-betaClinVarPMID:2798417
TALDO1Humandevelopmental and epileptic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathyClinVarPMID:28492532
TALDO1Humanearly infantile epileptic encephalopathy  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Early infantile epileptic encephalopathyClinVarPMID:28492532
TALDO1Humangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532
TALDO1Humangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
TALDO1Humanimmunodeficiency 39  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Immunodeficiency 39ClinVarPMID:28492532
TALDO1Humanneuronal ceroid lipofuscinosis  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Neuronal ceroid lipofuscinosisClinVarPMID:28492532
TALDO1HumanSegawa Syndrome, Autosomal Recessive  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Autosomal recessive DOPA responsive dystoniaClinVarPMID:28492532
TALDO1HumanTransaldolase Deficiency  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: EYAID SYNDROMEClinVarPMID:24033266
TALDO1HumanTransaldolase Deficiency  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: EYAID SYNDROMEClinVarPMID:25741868
TALDO1HumanTransaldolase Deficiency  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
TALDO1HumanTransaldolase Deficiency  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
TALDO1HumanTransaldolase Deficiency  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: EYAID SYNDROMEClinVar 
TALDO1HumanTransaldolase Deficiency  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: EYAID SYNDROMEClinVarPMID:28492532 and PMID:31769880
TALDO1HumanTransaldolase Deficiency  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: EYAID SYNDROMEClinVarPMID:23315216 more ...
TALDO1HumanTransaldolase Deficiency  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: EYAID SYNDROMEClinVarPMID:28492532 and PMID:28776642
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Original Reference(s)
TALDO1HumanChemical and Drug Induced Liver Injury  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:19436114
TALDO1Humanhepatocellular carcinoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:19436114
TALDO1HumanParkinson's disease  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:23233872
TALDO1HumanTransaldolase Deficiency  EXP 11554173CTD Direct Evidence: marker/mechanismCTD 
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Original Reference(s)
TALDO1HumanTransaldolase Deficiency  IAGP 7240710 OMIM 

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Original Reference(s)
TALDO1Human(1->4)-beta-D-glucan multiple interactionsISOTaldo1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of TALDO1 mRNACTDPMID:36331819
TALDO1Human1,2-dimethylhydrazine multiple interactionsISOTaldo1 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of TALDO1 mRNACTDPMID:22206623
TALDO1Human1,2-dimethylhydrazine decreases expressionISOTaldo1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of TALDO1 mRNACTDPMID:22206623
TALDO1Human17beta-estradiol multiple interactionsEXP 6480464[Estradiol co-treated with Norethindrone Acetate] results in increased expression of TALDO1 mRNACTDPMID:22217510
TALDO1Human17beta-estradiol decreases expressionISOTaldo1 (Mus musculus)6480464Estradiol results in decreased expression of TALDO1 mRNACTDPMID:39298647
TALDO1Human17beta-estradiol increases expressionISOTaldo1 (Rattus norvegicus)6480464Estradiol results in increased expression of TALDO1 mRNACTDPMID:32145629
TALDO1Human17beta-hydroxy-17-methylestra-4,9,11-trien-3-one decreases expressionEXP 6480464Metribolone results in decreased expression of TALDO1 proteinCTDPMID:17152098
TALDO1Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOTaldo1 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of TALDO1 mRNACTDPMID:20558275 and PMID:33387578
TALDO1Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOTaldo1 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin affects the expression of TALDO1 mRNACTDPMID:34747641
TALDO1Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOTaldo1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of TALDO1 mRNACTDPMID:15034205
TALDO1Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOTaldo1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of TALDO1 mRNACTDPMID:21570461
TALDO1Human2,4-dibromophenyl 2,4,5-tribromophenyl ether decreases expressionISOTaldo1 (Rattus norvegicus)64804642 more ...CTDPMID:19954255
TALDO1Human2,4-dibromophenyl 2,4,5-tribromophenyl ether increases expressionISOTaldo1 (Rattus norvegicus)64804642 more ...CTDPMID:19954255
TALDO1Human2,6-dimethoxyphenol multiple interactionsEXP 6480464[Sodium Chloride co-treated with pyrogallol 1 and 3-dimethyl ether] results in decreased expression of TALDO1 proteinCTDPMID:38598786
TALDO1Human2-acetamidofluorene multiple interactionsISOTaldo1 (Rattus norvegicus)6480464[2-Acetylaminofluorene co-treated with Diethylnitrosamine] results in increased expression of TALDO1 mRNA and [Diethylnitrosamine co-treated with 2-Acetylaminofluorene] results in increased expression of TALDO1 mRNACTDPMID:14656948 and PMID:16158176
TALDO1Human3,3',5,5'-tetrabromobisphenol A decreases expressionEXP 6480464tetrabromobisphenol A results in decreased expression of TALDO1 proteinCTDPMID:31675489
TALDO1Human3-chloropropane-1,2-diol decreases expressionISOTaldo1 (Rattus norvegicus)6480464alpha-Chlorohydrin analog results in decreased expression of TALDO1 proteinCTDPMID:26597043
TALDO1Human3-chloropropane-1,2-diol increases expressionISOTaldo1 (Rattus norvegicus)6480464alpha-Chlorohydrin results in increased expression of TALDO1 proteinCTDPMID:34915118
TALDO1Human4,4'-diaminodiphenylmethane decreases expressionISOTaldo1 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of TALDO1 mRNACTDPMID:18648102
TALDO1Human4,4'-sulfonyldiphenol increases expressionISOTaldo1 (Mus musculus)6480464bisphenol S results in increased expression of TALDO1 mRNACTDPMID:39298647

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Biological Process
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Original Reference(s)
TALDO1Humancarbohydrate metabolic process involved_inIEAInterPro:IPR001585 and InterPro:IPR018225150520179 InterProGO_REF:0000002
TALDO1Humancarbohydrate metabolic process involved_inTAS 150520179 PMID:9524206PINCPMID:9524206
TALDO1Humanfructose 6-phosphate metabolic process  ISOTaldo1 (Rattus norvegicus)9068941 RGDPMID:8477719 and REF_RGD_ID:1641803
TALDO1Humanfructose 6-phosphate metabolic process involved_inIEAUniProtKB:Q9EQS0 and ensembl:ENSRNOP00000024863150520179 EnsemblGO_REF:0000107
TALDO1Humanglyceraldehyde-3-phosphate metabolic process  ISOTaldo1 (Rattus norvegicus)9068941 RGDPMID:8477719 and REF_RGD_ID:1641803
TALDO1Humanglyceraldehyde-3-phosphate metabolic process involved_inIEAUniProtKB:Q9EQS0 and ensembl:ENSRNOP00000024863150520179 EnsemblGO_REF:0000107
TALDO1Humanpentose-phosphate shunt  ISOTaldo1 (Rattus norvegicus)9068941 RGDPMID:2843500 and REF_RGD_ID:1599574
TALDO1Humanpentose-phosphate shunt involved_inIEAUniProtKB:Q93092 more ...150520179 EnsemblGO_REF:0000107
TALDO1Humanpentose-phosphate shunt involved_inIEAUniProtKB-KW:KW-0570150520179 UniProtGO_REF:0000043
TALDO1Humanpentose-phosphate shunt involved_inIEAUniPathway:UPA00115150520179 UniProtGO_REF:0000041
TALDO1Humanpentose-phosphate shunt involved_inIEAInterPro:IPR004730150520179 InterProGO_REF:0000002
TALDO1Humanpentose-phosphate shunt, non-oxidative branch involved_inIMP 150520179 PMID:18498245FlyBasePMID:18498245
TALDO1Humanpentose-phosphate shunt, non-oxidative branch involved_inIBAPANTHER:PTN004184153 more ...150520179 GO_CentralGO_REF:0000033
TALDO1Humanpentose-phosphate shunt, non-oxidative branch involved_inIEAUniProtKB:Q9EQS0 and ensembl:ENSRNOP00000024863150520179 EnsemblGO_REF:0000107
TALDO1Humanpentose-phosphate shunt, non-oxidative branch  ISOTaldo1 (Rattus norvegicus)9068941 RGDPMID:3079759 more ...
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Cellular Component
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Original Reference(s)
TALDO1Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
TALDO1Humancytoplasm located_inIEAUniProtKB:Q93092 and ensembl:ENSMUSP00000026576150520179 EnsemblGO_REF:0000107
TALDO1Humancytoplasm located_inTAS 150520179 PMID:16130169UniProtPMID:16130169
TALDO1Humancytoplasm located_inIEAInterPro:IPR004730150520179 InterProGO_REF:0000002
TALDO1Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
TALDO1Humancytosol located_inIDA 150520179 PMID:18498245FlyBasePMID:18498245
TALDO1Humancytosol is_active_inIEAUniProtKB:Q93092 and ensembl:ENSMUSP00000026576150520179 EnsemblGO_REF:0000107
TALDO1Humancytosol located_inTAS 150520179 ReactomeReactome:R-HSA-163764 more ...
TALDO1Humanextracellular exosome located_inHDA 150520179 PMID:20458337 and PMID:23533145UniProtPMID:20458337 and PMID:23533145
TALDO1Humannucleus is_active_inIBAMGI:1274789 more ...150520179 GO_CentralGO_REF:0000033
TALDO1Humannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
TALDO1Humannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
TALDO1Humannucleus located_inHDA 150520179 PMID:21630459UniProtPMID:21630459
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Molecular Function
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Original Reference(s)
TALDO1Humancarbohydrate binding  ISOTaldo1 (Rattus norvegicus)9068941 RGDPMID:2843500 and REF_RGD_ID:1599574
TALDO1Humancarbohydrate binding enablesIEAUniProtKB:Q9EQS0 and ensembl:ENSRNOP00000024863150520179 EnsemblGO_REF:0000107
TALDO1Humanidentical protein binding enablesISOTaldo1 (Mus musculus)9068941 PMID:27703206UniProtPMID:27703206
TALDO1Humanmonosaccharide binding  ISOTaldo1 (Rattus norvegicus)9068941 RGDPMID:8477719 and REF_RGD_ID:1641803
TALDO1Humanmonosaccharide binding enablesIEAUniProtKB:Q9EQS0 and ensembl:ENSRNOP00000024863150520179 EnsemblGO_REF:0000107
TALDO1Humanprotein binding enablesIPIUniProtKB:P42858150520179 PMID:32814053IntActPMID:32814053
TALDO1Humanprotein binding enablesIPIUniProtKB:Q9NYB0150520179 PMID:21044950IntActPMID:21044950
TALDO1Humanprotein binding enablesIPIUniProtKB:Q77YB1150520179 PMID:25854864AgBasePMID:25854864
TALDO1Humantransaldolase activity enablesIMP 150520179 PMID:18498245FlyBasePMID:18498245
TALDO1Humantransaldolase activity enablesIEAUniProtKB:Q93092 more ...150520179 EnsemblGO_REF:0000107
TALDO1Humantransaldolase activity enablesIBAFB:FBgn0023477 more ...150520179 GO_CentralGO_REF:0000033
TALDO1Humantransaldolase activity enablesIEAARBA:ARBA00034177150520179 UniProtGO_REF:0000117
TALDO1Humantransaldolase activity enablesTAS 150520179 PMID:9524206PINCPMID:9524206
TALDO1Humantransaldolase activity enablesIEAEC:2.2.1.2150520179 UniProtGO_REF:0000003
TALDO1Humantransaldolase activity enablesIEAInterPro:IPR004730150520179 InterProGO_REF:0000002
TALDO1Humantransaldolase activity enablesIEARHEA:17053150520179 RHEAGO_REF:0000116
TALDO1Humantransaldolase activity  ISOTaldo1 (Rattus norvegicus)9068941 RGDPMID:2843500 more ...
TALDO1Humantransaldolase activity enablesIDA 150520179 PMID:18687684UniProtPMID:18687684
TALDO1Humantransferase activity enablesIEAUniProtKB-KW:KW-0808150520179 UniProtGO_REF:0000043
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RGD Manual Annotations


  

Imported Annotations - SMPDB

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Original Reference(s)
TALDO1Humanpentose phosphate pathway   EXP 10402751 SMPDBSMP:00031
TALDO1Humanribose 5-phosphate isomerase deficiency pathway  EXP 10402751 SMPDBSMP:00519
TALDO1Humantransaldolase deficiency pathway  EXP 10402751 SMPDBSMP:00520

Imported Annotations - KEGG (archival)

Object Symbol
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Original Reference(s)
TALDO1Humanpentose phosphate pathway   IEA 6907045 KEGGhsa:00030
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Original Reference(s)
TALDO1HumanAbnormal circulating glutamine concentration  IAGP 8699517 HPOORPHA:101028
TALDO1HumanAbnormal clitoris morphology  IAGP 8699517 HPOORPHA:101028
TALDO1HumanAbnormal facial shape  IAGP 8699517 HPOORPHA:101028
TALDO1HumanAbnormal respiratory system physiology  IAGP 8699517 HPOORPHA:101028
TALDO1HumanAbnormality of the kidney  IAGP 8699517 HPOORPHA:101028
TALDO1HumanAnemia  IAGP 8699517 HPOORPHA:101028
TALDO1HumanAnemia  IAGP 8699517 HPOMIM:606003
TALDO1HumanAsthma  IAGP 8699517 HPOMIM:606003
TALDO1HumanAtrial septal defect  IAGP 8699517 HPOORPHA:101028
TALDO1HumanAtrial septal defect  IAGP 8699517 HPOMIM:606003
TALDO1HumanAutosomal recessive inheritance  IAGP 8699517 HPOMIM:606003
TALDO1HumanBiventricular hypertrophy  IAGP 8699517 HPOORPHA:101028
TALDO1HumanCirrhosis  IAGP 8699517 HPOORPHA:101028
TALDO1HumanCirrhosis  IAGP 8699517 HPOMIM:606003
TALDO1HumanClitoral hypertrophy  IAGP 8699517 HPOMIM:606003
TALDO1HumanCoarctation of aorta  IAGP 8699517 HPOORPHA:101028
TALDO1HumanCoarctation of aorta  IAGP 8699517 HPOMIM:606003
TALDO1HumanDecreased liver function  IAGP 8699517 HPOMIM:606003
TALDO1HumanDeep philtrum  IAGP 8699517 HPOMIM:606003
TALDO1HumanDepressed nasal bridge  IAGP 8699517 HPOMIM:606003
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Original Reference(s)
TALDO1HumanCataract  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: CataractClinVarPMID:25741868 and PMID:28492532

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#
Reference Title
Reference Citation
1. The human transaldolase gene (TALDO1) is located on chromosome 11 at p15.4-p15.5. Banki K, etal., Genomics 1997 Oct 1;45(1):233-8.
2. The pentose phosphate pathway in the endoplasmic reticulum. Bublitz C and Steavenson S, J Biol Chem. 1988 Sep 15;263(26):12849-53.
3. Exchange reactions catalyzed by group-transferring enzymes oppose the quantitation and the unravelling of the identify of the pentose pathway. Flanigan I, etal., Eur J Biochem. 1993 Apr 1;213(1):477-85.
4. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
5. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
9. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
12. A humble hexose monophosphate pathway metabolite regulates short- and long-term control of lipogenesis. Veech RL Proc Natl Acad Sci U S A. 2003 May 13;100(10):5578-80. Epub 2003 Apr 29.
13. Transaldolase deficiency: liver cirrhosis associated with a new inborn error in the pentose phosphate pathway. Verhoeven NM, etal., Am J Hum Genet. 2001 May;68(5):1086-92. Epub 2001 Mar 27.
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PMID:7964452   PMID:8300619   PMID:9119412   PMID:9524206   PMID:10702296   PMID:10869557   PMID:12477932   PMID:14702349   PMID:15231747   PMID:15383276   PMID:15489334   PMID:16092052  
PMID:16130169   PMID:17081983   PMID:17095351   PMID:17503352   PMID:17603756   PMID:18331807   PMID:18498245   PMID:18687684   PMID:18805652   PMID:19738201   PMID:20194725   PMID:20458337  
PMID:20600873   PMID:21044950   PMID:21062960   PMID:21319273   PMID:21630459   PMID:21873635   PMID:22510381   PMID:22863883   PMID:22939629   PMID:23315216   PMID:23376485   PMID:23533145  
PMID:23736541   PMID:24710276   PMID:24981860   PMID:24999758   PMID:25388407   PMID:25854864   PMID:25921289   PMID:26186194   PMID:26344197   PMID:26506232   PMID:26638075   PMID:26641092  
PMID:26831064   PMID:27684187   PMID:27703206   PMID:28302793   PMID:28514442   PMID:28524877   PMID:28533407   PMID:28947420   PMID:29117863   PMID:30323337   PMID:30463901   PMID:30575818  
PMID:30884312   PMID:30948266   PMID:31436131   PMID:31796584   PMID:31980649   PMID:32416067   PMID:32513696   PMID:32687490   PMID:32707033   PMID:32814053   PMID:32828637   PMID:32913203  
PMID:34079125   PMID:34189442   PMID:34282517   PMID:34349018   PMID:34551306   PMID:34591612   PMID:34677006   PMID:34732716   PMID:35008187   PMID:35032548   PMID:35235311   PMID:35271311  
PMID:35446349   PMID:35509820   PMID:35545034   PMID:35562734   PMID:35831314   PMID:35833506   PMID:35944360   PMID:36215168   PMID:36225252   PMID:36244648   PMID:36369321   PMID:36517590  
PMID:36762613   PMID:36912080   PMID:37120454   PMID:37689310   PMID:37827155   PMID:39147351   PMID:39358380   PMID:39422127  



TALDO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811747,464 - 765,012 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11747,415 - 765,012 (+)EnsemblGRCh38hg38GRCh38
GRCh3711747,464 - 765,012 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3611737,432 - 755,024 (+)NCBINCBI36Build 36hg18NCBI36
Build 3411737,431 - 755,023NCBI
Celera11815,308 - 828,130 (+)NCBICelera
Cytogenetic Map11p15.5NCBI
HuRef11564,412 - 581,950 (+)NCBIHuRef
CHM1_111746,369 - 763,851 (+)NCBICHM1_1
T2T-CHM13v2.011798,942 - 816,524 (+)NCBIT2T-CHM13v2.0
Taldo1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397140,972,073 - 140,982,889 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7140,972,112 - 140,982,881 (+)EnsemblGRCm39 Ensembl
GRCm387141,392,160 - 141,402,976 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7141,392,199 - 141,402,968 (+)EnsemblGRCm38mm10GRCm38
MGSCv377148,578,059 - 148,588,875 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367141,243,531 - 141,254,288 (+)NCBIMGSCv36mm8
Celera7141,185,913 - 141,196,721 (+)NCBICelera
Cytogenetic Map7F5NCBI
cM Map786.73NCBI
Taldo1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81205,923,196 - 205,933,526 (+)NCBIGRCr8
mRatBN7.21196,493,634 - 196,503,965 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1196,493,589 - 196,503,974 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1204,839,159 - 204,849,489 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01211,967,918 - 211,978,015 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01204,642,055 - 204,652,153 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01214,375,555 - 214,385,886 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1214,375,515 - 214,385,885 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01221,292,669 - 221,302,999 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41201,582,856 - 201,593,187 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11201,737,566 - 201,747,896 (+)NCBI
Celera1194,127,362 - 194,137,466 (+)NCBICelera
Cytogenetic Map1q41NCBI
Taldo1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547611,356,603 - 11,364,259 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495547611,356,601 - 11,364,573 (-)NCBIChiLan1.0ChiLan1.0
TALDO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v293,144,559 - 3,162,555 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1112,354,981 - 2,372,634 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011764,864 - 782,548 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111809,751 - 826,744 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11809,751 - 826,744 (+)Ensemblpanpan1.1panPan2
TALDO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11825,764,138 - 25,772,043 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1825,436,609 - 25,444,516 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01826,372,292 - 26,380,192 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1826,372,286 - 26,380,960 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11825,881,807 - 25,889,713 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01825,526,824 - 25,534,713 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01826,139,191 - 26,147,099 (+)NCBIUU_Cfam_GSD_1.0
Taldo1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947530,997 - 540,150 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936888531,020 - 540,820 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936888531,002 - 540,194 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TALDO1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2464,728 - 472,835 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12464,781 - 472,836 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22201,532 - 227,228 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TALDO1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11553,475 - 569,935 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1553,458 - 573,546 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603897,616,675 - 97,643,928 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Taldo1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476621,758,821 - 21,766,027 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476621,758,821 - 21,766,052 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in TALDO1
222 total Variants

1 to 10 of 313 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_006755.2(TALDO1):c.512_514del (p.Ser171del) deletion Deficiency of transaldolase [RCV000007998] Chr11:763392..763394 [GRCh38]
Chr11:763392..763394 [GRCh37]
Chr11:11p15.5
pathogenic
GRCh38/hg38 11p15.5-15.4(chr11:196966-3377077)x3 copy number gain See cases [RCV000050947] Chr11:196966..3377077 [GRCh38]
Chr11:196966..3398307 [GRCh37]
Chr11:186966..3354883 [NCBI36]
Chr11:11p15.5-15.4
pathogenic
GRCh38/hg38 11p15.5-15.4(chr11:196966-4435344)x3 copy number gain See cases [RCV000050927] Chr11:196966..4435344 [GRCh38]
Chr11:196966..4456574 [GRCh37]
Chr11:186966..4413150 [NCBI36]
Chr11:11p15.5-15.4
pathogenic
GRCh38/hg38 11p15.5(chr11:758848-1998025)x1 copy number loss See cases [RCV000052645] Chr11:758848..1998025 [GRCh38]
Chr11:758848..2019255 [GRCh37]
Chr11:748848..1975831 [NCBI36]
Chr11:11p15.5
pathogenic
GRCh38/hg38 11p15.5-15.4(chr11:218365-3377077)x3 copy number gain See cases [RCV000053614] Chr11:218365..3377077 [GRCh38]
Chr11:218365..3398307 [GRCh37]
Chr11:208365..3354883 [NCBI36]
Chr11:11p15.5-15.4
pathogenic
GRCh38/hg38 11p15.5-15.4(chr11:196966-3624139)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053592]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053592]|See cases [RCV000053592] Chr11:196966..3624139 [GRCh38]
Chr11:196966..3645369 [GRCh37]
Chr11:186966..3601945 [NCBI36]
Chr11:11p15.5-15.4
pathogenic
GRCh38/hg38 11p15.5-13(chr11:202758-31726224)x3 copy number gain See cases [RCV000053613] Chr11:202758..31726224 [GRCh38]
Chr11:202758..31747772 [GRCh37]
Chr11:192758..31704348 [NCBI36]
Chr11:11p15.5-13
pathogenic
GRCh37/hg19 11p15.5-15.4(chr11:10701-5080415)x2 copy number gain See cases [RCV001310286] Chr11:10701..5080415 [GRCh37]
Chr11:11p15.5-15.4
pathogenic
NM_006755.2(TALDO1):c.516dup (p.Ala173fs) duplication Deficiency of transaldolase [RCV000190629] Chr11:763397..763398 [GRCh38]
Chr11:763397..763398 [GRCh37]
Chr11:11p15.5
pathogenic
GRCh38/hg38 11p15.5-15.1(chr11:446754-18904742)x3 copy number gain See cases [RCV000133997] Chr11:446754..18904742 [GRCh38]
Chr11:446754..18926289 [GRCh37]
Chr11:436754..18882865 [NCBI36]
Chr11:11p15.5-15.1
pathogenic
1 to 10 of 313 rows

Predicted Target Of
Summary Value
Count of predictions:1817
Count of miRNA genes:751
Interacting mature miRNAs:872
Transcripts:ENST00000319006, ENST00000528070, ENST00000528097, ENST00000530119, ENST00000530440, ENST00000530666, ENST00000532202, ENST00000532685, ENST00000533796
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597306891GWAS1402965_Hpulse pressure measurement QTL GWAS1402965 (human)1e-09pulse pressure measurementpulse pressure (CMO:0000292)11758446758447Human
1558691SCL8_HSerum cholesterol level QTL 8 (human)1.2Lipid levelHDL cholesterol1115227071Human
597092369GWAS1188443_Hchronic kidney disease, Proteinuria QTL GWAS1188443 (human)0.000009chronic kidney disease, Proteinuria11762791762792Human

D11S3271  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711759,967 - 760,252UniSTSGRCh37
Build 3611749,967 - 750,252RGDNCBI36
Celera11827,845 - 828,130RGD
Cytogenetic Map11p15.5-p15.4UniSTS
HuRef11576,890 - 577,175UniSTS
SHGC-132114  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711764,908 - 765,018UniSTSGRCh37
GRCh37X74,620,973 - 74,621,084UniSTSGRCh37
Build 36X74,537,698 - 74,537,809RGDNCBI36
CeleraX74,904,316 - 74,904,426RGD
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map11p15.5-p15.4UniSTS
HuRef11581,834 - 581,944UniSTS
HuRefX68,254,340 - 68,254,450UniSTS
RH36444  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711750,076 - 750,297UniSTSGRCh37
Build 3611740,076 - 740,297RGDNCBI36
Celera11817,955 - 818,176RGD
Cytogenetic Map11p15.5-p15.4UniSTS
HuRef11567,059 - 567,280UniSTS
GeneMap99-GB4 RH Map1120.53UniSTS
NCBI RH Map1110.0UniSTS
SHGC-12900  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711764,843 - 765,021UniSTSGRCh37
GRCh37X74,620,908 - 74,621,087UniSTSGRCh37
Build 36X74,537,633 - 74,537,812RGDNCBI36
CeleraX74,904,251 - 74,904,429RGD
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map11p15.5-p15.4UniSTS
HuRef11581,769 - 581,947UniSTS
HuRefX68,254,275 - 68,254,453UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2439 2788 2253 4974 1726 2351 6 624 1951 465 2270 7306 6472 53 3734 1 852 1744 1617 175 1


1 to 17 of 17 rows
RefSeq Transcripts NG_008160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF058912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF058913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH006712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP006621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM005596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L19437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L27346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U62747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 17 of 17 rows

Ensembl Acc Id: ENST00000319006   ⟹   ENSP00000321259
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11747,464 - 765,012 (+)Ensembl
Ensembl Acc Id: ENST00000528070   ⟹   ENSP00000435042
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11747,415 - 763,520 (+)Ensembl
Ensembl Acc Id: ENST00000528097   ⟹   ENSP00000437098
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11747,428 - 765,012 (+)Ensembl
Ensembl Acc Id: ENST00000530119
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11747,464 - 760,965 (+)Ensembl
Ensembl Acc Id: ENST00000530440   ⟹   ENSP00000433501
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11747,454 - 763,850 (+)Ensembl
Ensembl Acc Id: ENST00000530666
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11763,982 - 764,947 (+)Ensembl
Ensembl Acc Id: ENST00000532202
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11764,370 - 765,005 (+)Ensembl
Ensembl Acc Id: ENST00000532685
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11747,417 - 756,284 (+)Ensembl
Ensembl Acc Id: ENST00000533796
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11755,744 - 760,257 (+)Ensembl
RefSeq Acc Id: NM_006755   ⟹   NP_006746
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811747,464 - 765,012 (+)NCBI
GRCh3711747,417 - 765,024 (+)NCBI
Build 3611737,432 - 755,024 (+)NCBI Archive
HuRef11564,412 - 581,950 (+)ENTREZGENE
CHM1_111746,369 - 763,851 (+)NCBI
T2T-CHM13v2.011798,942 - 816,524 (+)NCBI
Sequence:
RefSeq Acc Id: NP_006746   ⟸   NM_006755
- UniProtKB: Q8WV32 (UniProtKB/Swiss-Prot),   O00751 (UniProtKB/Swiss-Prot),   B2R8M2 (UniProtKB/Swiss-Prot),   Q8WZ45 (UniProtKB/Swiss-Prot),   P37837 (UniProtKB/Swiss-Prot),   A0A140VK56 (UniProtKB/TrEMBL),   F2Z393 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000433501   ⟸   ENST00000530440
Ensembl Acc Id: ENSP00000435042   ⟸   ENST00000528070
Ensembl Acc Id: ENSP00000437098   ⟸   ENST00000528097
Ensembl Acc Id: ENSP00000321259   ⟸   ENST00000319006

Name Modeler Protein Id AA Range Protein Structure
AF-P37837-F1-model_v2 AlphaFold P37837 1-337 view protein structure

RGD ID:6789424
Promoter ID:HG_KWN:11857
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000257116,   UC001LRA.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3611737,099 - 737,599 (+)MPROMDB
RGD ID:7219207
Promoter ID:EPDNEW_H15349
Type:initiation region
Name:TALDO1_1
Description:transaldolase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811747,464 - 747,524EPDNEW
RGD ID:6810179
Promoter ID:HG_ACW:10481
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:TALDO1.IAPR07-UNSPLICED,   TALDO1.NAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 3611753,736 - 754,487 (+)MPROMDB


1 to 37 of 37 rows
Database
Acc Id
Source(s)
COSMIC TALDO1 COSMIC
Ensembl Genes ENSG00000177156 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000319006 ENTREZGENE
  ENST00000319006.8 UniProtKB/Swiss-Prot
Gene3D-CATH 3.20.20.70 UniProtKB/Swiss-Prot
GTEx ENSG00000177156 GTEx
HGNC ID HGNC:11559 ENTREZGENE
Human Proteome Map TALDO1 Human Proteome Map
InterPro Aldolase_TIM UniProtKB/Swiss-Prot
  TAL/FSA UniProtKB/Swiss-Prot
  Transaldolase_1 UniProtKB/Swiss-Prot
  Transaldolase_AS UniProtKB/Swiss-Prot
KEGG Report hsa:6888 UniProtKB/Swiss-Prot
NCBI Gene 6888 ENTREZGENE
OMIM 602063 OMIM
PANTHER PTHR10683 UniProtKB/Swiss-Prot
  PTHR10683:SF18 UniProtKB/Swiss-Prot
Pfam TAL_FSA UniProtKB/Swiss-Prot
PharmGKB PA36328 PharmGKB
PROSITE TRANSALDOLASE_1 UniProtKB/Swiss-Prot
  TRANSALDOLASE_2 UniProtKB/Swiss-Prot
Superfamily-SCOP Aldolase UniProtKB/Swiss-Prot
UniProt A0A140VK56 ENTREZGENE, UniProtKB/TrEMBL
  B2R8M2 ENTREZGENE
  B4DID5_HUMAN UniProtKB/TrEMBL
  E9PKI8_HUMAN UniProtKB/TrEMBL
  E9PM01_HUMAN UniProtKB/TrEMBL
  F2Z393 ENTREZGENE, UniProtKB/TrEMBL
  O00751 ENTREZGENE
  P37837 ENTREZGENE
  Q8WV32 ENTREZGENE
  Q8WZ45 ENTREZGENE
  TALDO_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary B2R8M2 UniProtKB/Swiss-Prot
  O00751 UniProtKB/Swiss-Prot
  Q8WV32 UniProtKB/Swiss-Prot
  Q8WZ45 UniProtKB/Swiss-Prot
1 to 37 of 37 rows