NNAT (neuronatin) - Rat Genome Database

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Advanced Search (OLGA)
Gene: NNAT (neuronatin) Homo sapiens
Analyze
Symbol: NNAT
Name: neuronatin
RGD ID: 730841
HGNC Page HGNC:7860
Description: Predicted to be involved in positive regulation of insulin secretion. Predicted to act upstream of or within regulation of protein localization and response to glucose. Predicted to be located in membrane. Predicted to be active in cytoplasm.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: MGC1439; Peg5
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382037,521,250 - 37,523,690 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2037,521,206 - 37,523,690 (+)EnsemblGRCh38hg38GRCh38
GRCh372036,149,652 - 36,152,092 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362035,583,021 - 35,585,506 (+)NCBINCBI36Build 36hg18NCBI36
Build 342035,583,020 - 35,585,502NCBI
Celera2032,856,869 - 32,859,355 (+)NCBICelera
Cytogenetic Map20q11.23NCBI
HuRef2032,885,325 - 32,887,812 (+)NCBIHuRef
CHM1_12036,052,423 - 36,054,893 (+)NCBICHM1_1
T2T-CHM13v2.02039,245,345 - 39,247,787 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
5-aza-2'-deoxycytidine  (EXP,ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
all-trans-retinoic acid  (EXP)
alpha-Zearalanol  (ISO)
ammonium chloride  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
Benzo[k]fluoranthene  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
carbamazepine  (EXP)
carbon nanotube  (ISO)
chlorpyrifos  (ISO)
cisplatin  (EXP)
Cuprizon  (ISO)
dexamethasone  (EXP)
diazinon  (EXP)
Dibutyl phosphate  (EXP)
dioxygen  (EXP,ISO)
diuron  (ISO)
ellagic acid  (EXP)
endosulfan  (ISO)
ethanol  (EXP,ISO)
flavonoids  (ISO)
folic acid  (EXP,ISO)
furan  (ISO)
gentamycin  (ISO)
L-ascorbic acid  (ISO)
Licochalcone B  (EXP)
lidocaine  (EXP,ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-methyl-N-nitrosourea  (ISO)
naphthalene  (ISO)
niclosamide  (EXP)
nigericin  (ISO)
nitroglycerin  (ISO)
ozone  (ISO)
paraquat  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
PhIP  (ISO)
pirinixic acid  (ISO)
resveratrol  (EXP)
rotenone  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
Soman  (ISO)
tamoxifen  (ISO)
tetrachloromethane  (ISO)
thapsigargin  (EXP)
thioacetamide  (ISO)
titanium dioxide  (ISO)
trimellitic anhydride  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
tunicamycin  (EXP)
valinomycin  (ISO)
valproic acid  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,ISO)
membrane  (IEA)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8660979   PMID:8813377   PMID:9356927   PMID:11476579   PMID:11543638   PMID:11780052   PMID:11960906   PMID:12477932   PMID:12775420   PMID:15146197   PMID:15489334   PMID:17805055  
PMID:18701710   PMID:19218280   PMID:19851307   PMID:21742036   PMID:21832049   PMID:21873635   PMID:22022350   PMID:22624064   PMID:23408434   PMID:23825673   PMID:24252747   PMID:24345474  
PMID:24345642   PMID:27109921   PMID:28181547   PMID:30933048   PMID:31741433   PMID:34092612   PMID:35655118   PMID:36473542   PMID:37400769   PMID:37987927  


Genomics

Comparative Map Data
NNAT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382037,521,250 - 37,523,690 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2037,521,206 - 37,523,690 (+)EnsemblGRCh38hg38GRCh38
GRCh372036,149,652 - 36,152,092 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362035,583,021 - 35,585,506 (+)NCBINCBI36Build 36hg18NCBI36
Build 342035,583,020 - 35,585,502NCBI
Celera2032,856,869 - 32,859,355 (+)NCBICelera
Cytogenetic Map20q11.23NCBI
HuRef2032,885,325 - 32,887,812 (+)NCBIHuRef
CHM1_12036,052,423 - 36,054,893 (+)NCBICHM1_1
T2T-CHM13v2.02039,245,345 - 39,247,787 (+)NCBIT2T-CHM13v2.0
Nnat
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392157,401,936 - 157,404,445 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2157,401,998 - 157,404,442 (+)EnsemblGRCm39 Ensembl
GRCm382157,560,078 - 157,562,525 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2157,560,078 - 157,562,522 (+)EnsemblGRCm38mm10GRCm38
MGSCv372157,385,846 - 157,388,258 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362157,251,564 - 157,253,945 (+)NCBIMGSCv36mm8
Celera2163,504,157 - 163,506,569 (+)NCBICelera
Cytogenetic Map2H1NCBI
cM Map278.4NCBI
Nnat
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83166,646,373 - 166,648,845 (+)NCBIGRCr8
mRatBN7.23146,225,941 - 146,228,868 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3146,226,407 - 146,228,834 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3150,051,744 - 150,054,205 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03158,552,933 - 158,555,392 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03156,294,850 - 156,297,310 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03154,043,873 - 154,046,334 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3154,043,873 - 154,046,330 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03161,553,358 - 161,557,429 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43148,269,404 - 148,271,781 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13148,175,312 - 148,177,690 (+)NCBI
Celera3144,930,375 - 144,932,836 (+)NCBICelera
Cytogenetic Map3q42NCBI
Nnat
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544519,121,164 - 19,125,514 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544519,121,164 - 19,125,514 (-)NCBIChiLan1.0ChiLan1.0
NNAT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22143,246,341 - 43,251,217 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12043,239,925 - 43,244,315 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02033,842,071 - 33,845,575 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12034,955,233 - 34,959,493 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2034,955,234 - 34,959,493 (+)Ensemblpanpan1.1panPan2
NNAT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12426,119,153 - 26,121,573 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2426,118,991 - 26,120,906 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2425,764,843 - 25,767,256 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02426,815,822 - 26,818,235 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2426,815,835 - 26,817,449 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12426,091,104 - 26,093,520 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02426,198,494 - 26,200,910 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02426,686,053 - 26,688,469 (+)NCBIUU_Cfam_GSD_1.0
Nnat
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640175,007,353 - 175,009,820 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365613,739,664 - 3,742,154 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365613,739,664 - 3,744,015 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NNAT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11740,625,990 - 40,629,523 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21746,042,960 - 46,045,928 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NNAT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1226,229,765 - 26,232,249 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl226,230,696 - 26,232,127 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605075,102,293 - 75,105,653 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nnat
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248422,122,968 - 2,125,490 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NNAT
1 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 20q11.22-12(chr20:34541747-39663219)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052766]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052766]|See cases [RCV000052766] Chr20:34541747..39663219 [GRCh38]
Chr20:33129551..38291861 [GRCh37]
Chr20:32593212..37725275 [NCBI36]
Chr20:20q11.22-12		 pathogenic
GRCh38/hg38 20q11.22-13.11(chr20:34249453-43359749)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053002]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053002]|See cases [RCV000053002] Chr20:34249453..43359749 [GRCh38]
Chr20:32837259..41988389 [GRCh37]
Chr20:32300920..41421803 [NCBI36]
Chr20:20q11.22-13.11		 pathogenic
GRCh38/hg38 20p12.2-q12(chr20:9811433-39316956)x3 copy number gain See cases [RCV000052999] Chr20:9811433..39316956 [GRCh38]
Chr20:9792081..37945599 [GRCh37]
Chr20:9740081..37379013 [NCBI36]
Chr20:20p12.2-q12		 pathogenic
GRCh38/hg38 20p13-q13.33(chr20:99557-64277321)x3 copy number gain See cases [RCV000135859] Chr20:99557..64277321 [GRCh38]
Chr20:80198..62908674 [GRCh37]
Chr20:28198..62379118 [NCBI36]
Chr20:20p13-q13.33		 pathogenic
GRCh38/hg38 20q11.22-13.12(chr20:35237946-47631818)x1 copy number loss See cases [RCV000140816] Chr20:35237946..47631818 [GRCh38]
Chr20:33825749..46260562 [GRCh37]
Chr20:33289165..45693969 [NCBI36]
Chr20:20q11.22-13.12		 pathogenic
GRCh37/hg19 20p13-q13.33(chr20:61569-62915555)x3 copy number gain See cases [RCV000510832] Chr20:61569..62915555 [GRCh37]
Chr20:20p13-q13.33		 pathogenic
GRCh37/hg19 20p13-q13.33(chr20:61569-62915555) copy number gain See cases [RCV000512450] Chr20:61569..62915555 [GRCh37]
Chr20:20p13-q13.33		 pathogenic
Single allele deletion Focal-onset seizure [RCV001004039] Chr20:34980430..46806549 [GRCh37]
Chr20:20q11.23-13.13		 likely pathogenic
GRCh37/hg19 20p13-q13.33(chr20:63244-62948788)x3 copy number gain not provided [RCV000741058] Chr20:63244..62948788 [GRCh37]
Chr20:20p13-q13.33		 pathogenic
GRCh37/hg19 20p13-q13.33(chr20:63244-62961294)x3 copy number gain not provided [RCV000741059] Chr20:63244..62961294 [GRCh37]
Chr20:20p13-q13.33		 pathogenic
GRCh37/hg19 20p13-q13.33(chr20:63244-62912463)x3 copy number gain not provided [RCV000741057] Chr20:63244..62912463 [GRCh37]
Chr20:20p13-q13.33		 pathogenic
NC_000020.10:g.(?_35569422)_(36500415_?)dup duplication Aicardi-Goutieres syndrome 5 [RCV003119602]|Congenital disorder of glycosylation [RCV004579604] Chr20:35569422..36500415 [GRCh37]
Chr20:20q11.23		 uncertain significance
NM_005386.4(NNAT):c.54C>G (p.Ile18Met) single nucleotide variant not specified [RCV004187577] Chr20:37521385 [GRCh38]
Chr20:36149787 [GRCh37]
Chr20:20q11.23		 uncertain significance
GRCh37/hg19 20q11.23(chr20:36112920-36787057)x1 copy number loss not provided [RCV003483362] Chr20:36112920..36787057 [GRCh37]
Chr20:20q11.23		 uncertain significance
NM_005386.4(NNAT):c.17C>T (p.Ala6Val) single nucleotide variant not specified [RCV004647424] Chr20:37521348 [GRCh38]
Chr20:36149750 [GRCh37]
Chr20:20q11.23		 uncertain significance
NM_005386.4(NNAT):c.55T>G (p.Phe19Val) single nucleotide variant not specified [RCV004643868] Chr20:37521386 [GRCh38]
Chr20:36149788 [GRCh37]
Chr20:20q11.23		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1162
Count of miRNA genes:439
Interacting mature miRNAs:493
Transcripts:ENST00000062104, ENST00000346199
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human

Markers in Region
RH79915  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372036,151,185 - 36,151,435UniSTSGRCh37
Build 362035,584,599 - 35,584,849RGDNCBI36
Celera2032,858,448 - 32,858,698RGD
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20q11.2-q12UniSTS
HuRef2032,886,905 - 32,887,155UniSTS
NNAT_8167  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372036,151,331 - 36,152,139UniSTSGRCh37
Build 362035,584,745 - 35,585,553RGDNCBI36
Celera2032,858,594 - 32,859,402RGD
HuRef2032,887,051 - 32,887,859UniSTS
D20S125E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372036,148,194 - 36,148,345UniSTSGRCh37
Build 362035,581,608 - 35,581,759RGDNCBI36
Celera2032,855,456 - 32,855,607RGD
HuRef2032,883,912 - 32,884,063UniSTS
Stanford-G3 RH Map201968.0UniSTS
NCBI RH Map20335.1UniSTS
GeneMap99-G3 RH Map202001.0UniSTS
WI-21755  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372036,151,765 - 36,152,061UniSTSGRCh37
Build 362035,585,179 - 35,585,475RGDNCBI36
Celera2032,859,028 - 32,859,324RGD
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20q11.2-q12UniSTS
HuRef2032,887,485 - 32,887,781UniSTS
GeneMap99-GB4 RH Map20209.89UniSTS
Whitehead-RH Map20232.9UniSTS
RH27937  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372036,148,340 - 36,148,413UniSTSGRCh37
Build 362035,581,754 - 35,581,827RGDNCBI36
Celera2032,855,602 - 32,855,675RGD
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20q11.2-q12UniSTS
HuRef2032,884,058 - 32,884,131UniSTS
GeneMap99-GB4 RH Map20231.12UniSTS
NCBI RH Map20344.5UniSTS
D20S125E  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20q11.2-q12UniSTS
Stanford-G3 RH Map201968.0UniSTS
NCBI RH Map20335.1UniSTS
GeneMap99-G3 RH Map202001.0UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2419 2788 2248 4941 1678 2278 5 586 1847 426 2253 7126 6365 30 3714 1 827 1723 1584 174 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_009263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001322802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_181689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB002392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI879211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK312069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL109614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC001768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE255132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG472075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT019426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN388981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY021161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U25033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U25034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U31767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000346199   ⟹   ENSP00000335497
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2037,521,206 - 37,523,690 (+)Ensembl
Ensembl Acc Id: ENST00000647955   ⟹   ENSP00000496909
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2037,521,241 - 37,523,474 (+)Ensembl
Ensembl Acc Id: ENST00000649309   ⟹   ENSP00000497857
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2037,521,250 - 37,523,690 (+)Ensembl
Ensembl Acc Id: ENST00000649451   ⟹   ENSP00000497164
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2037,521,250 - 37,523,690 (+)Ensembl
Ensembl Acc Id: ENST00000649697   ⟹   ENSP00000497147
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2037,521,251 - 37,523,013 (+)Ensembl
RefSeq Acc Id: NM_001322802   ⟹   NP_001309731
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382037,521,250 - 37,523,690 (+)NCBI
CHM1_12036,052,424 - 36,054,893 (+)NCBI
T2T-CHM13v2.02039,245,345 - 39,247,787 (+)NCBI
Sequence:
RefSeq Acc Id: NM_005386   ⟹   NP_005377
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382037,521,250 - 37,523,690 (+)NCBI
GRCh372036,149,607 - 36,152,092 (+)ENTREZGENE
Build 362035,583,021 - 35,585,506 (+)NCBI Archive
HuRef2032,885,325 - 32,887,812 (+)ENTREZGENE
CHM1_12036,052,424 - 36,054,893 (+)NCBI
T2T-CHM13v2.02039,245,345 - 39,247,787 (+)NCBI
Sequence:
RefSeq Acc Id: NM_181689   ⟹   NP_859017
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382037,521,250 - 37,523,690 (+)NCBI
GRCh372036,149,607 - 36,152,092 (+)ENTREZGENE
Build 362035,583,021 - 35,585,506 (+)NCBI Archive
HuRef2032,885,325 - 32,887,812 (+)ENTREZGENE
CHM1_12036,052,424 - 36,054,893 (+)NCBI
T2T-CHM13v2.02039,245,345 - 39,247,787 (+)NCBI
Sequence:
RefSeq Acc Id: NP_005377   ⟸   NM_005386
- Peptide Label: isoform alpha
- UniProtKB: Q16596 (UniProtKB/Swiss-Prot),   E1P5V6 (UniProtKB/Swiss-Prot),   B2R558 (UniProtKB/Swiss-Prot),   Q5U0N3 (UniProtKB/Swiss-Prot),   Q16517 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_859017   ⟸   NM_181689
- Peptide Label: isoform beta
- UniProtKB: Q16517 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001309731   ⟸   NM_001322802
- Peptide Label: isoform gamma
- UniProtKB: A0A3B3ITN5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000497164   ⟸   ENST00000649451
Ensembl Acc Id: ENSP00000497857   ⟸   ENST00000649309
Ensembl Acc Id: ENSP00000335497   ⟸   ENST00000346199
Ensembl Acc Id: ENSP00000497147   ⟸   ENST00000649697
Ensembl Acc Id: ENSP00000496909   ⟸   ENST00000647955

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q16517-F1-model_v2 AlphaFold Q16517 1-81 view protein structure

Promoters
RGD ID:6798874
Promoter ID:HG_KWN:39348
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000079116,   OTTHUMT00000079117
Position:
Human AssemblyChrPosition (strand)Source
Build 362035,582,826 - 35,583,326 (+)MPROMDB
RGD ID:13206885
Promoter ID:EPDNEW_H27023
Type:multiple initiation site
Name:NNAT_1
Description:neuronatin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382037,521,250 - 37,521,310EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:7860 AgrOrtholog
COSMIC NNAT COSMIC
Ensembl Genes ENSG00000053438 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000346199 ENTREZGENE
  ENST00000346199.3 UniProtKB/Swiss-Prot
  ENST00000647955.1 UniProtKB/TrEMBL
  ENST00000649309 ENTREZGENE
  ENST00000649309.2 UniProtKB/TrEMBL
  ENST00000649451 ENTREZGENE
  ENST00000649451.1 UniProtKB/Swiss-Prot
  ENST00000649697.1 UniProtKB/TrEMBL
GTEx ENSG00000053438 GTEx
HGNC ID HGNC:7860 ENTREZGENE
Human Proteome Map NNAT Human Proteome Map
InterPro Neuronatin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:4826 UniProtKB/Swiss-Prot
NCBI Gene 4826 ENTREZGENE
OMIM 603106 OMIM
PANTHER NEURONATIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15285 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA31665 PharmGKB
UniProt A0A3B3IRP3_HUMAN UniProtKB/TrEMBL
  A0A3B3IS74_HUMAN UniProtKB/TrEMBL
  A0A3B3ITN5 ENTREZGENE, UniProtKB/TrEMBL
  B2R558 ENTREZGENE
  E1P5V6 ENTREZGENE
  NNAT_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q16596 ENTREZGENE
  Q5U0N3 ENTREZGENE
UniProt Secondary B2R558 UniProtKB/Swiss-Prot
  E1P5V6 UniProtKB/Swiss-Prot
  Q16596 UniProtKB/Swiss-Prot
  Q5U0N3 UniProtKB/Swiss-Prot