LINC00964 (long intergenic non-protein coding RNA 964)

Gene: LINC00964 (long intergenic non-protein coding RNA 964) Homo sapiens

Analyze

Symbol:

LINC00964

Name:

long intergenic non-protein coding RNA 964

RGD ID:

7246439

HGNC Page

HGNC:27226

Description:

INTERACTS WITH benzo[a]pyrene; cisplatin; cyclosporin A

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

VALIDATED

Previously known as:

RP11-6D1.6

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	124,942,008 - 124,951,095 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	124,823,702 - 124,962,531 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	125,954,250 - 125,963,337 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Celera	8	122,142,610 - 122,151,694 (+)	NCBI		Celera
Cytogenetic Map	8	q24.13	NCBI
HuRef	8	121,277,710 - 121,286,794 (+)	NCBI		HuRef
CHM1_1	8	125,994,524 - 126,003,611 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	126,075,510 - 126,084,597 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

benzo[a]pyrene (EXP)

cisplatin (EXP)

cyclosporin A (EXP)

lipopolysaccharide (EXP)

nickel atom (EXP)

S-(1,2-dichlorovinyl)-L-cysteine (EXP)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:14702039	PMID:16344560	PMID:16751776	PMID:32513696

Genomics

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 8q24.13-24.21(chr8:122454392-128513076)x3	copy number gain	See cases [RCV000133620]	Chr8:122454392..128513076 [GRCh38] Chr8:123466631..129525322 [GRCh37] Chr8:123535812..129594504 [NCBI36] Chr8:8q24.13-24.21	pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:94682154-145068656)x3	copy number gain	See cases [RCV000134353]	Chr8:94682154..145068656 [GRCh38] Chr8:95694382..146294042 [GRCh37] Chr8:95763558..146264846 [NCBI36] Chr8:8q22.1-24.3	pathogenic
GRCh38/hg38 8q24.13(chr8:124895891-125399814)x3	copy number gain	See cases [RCV000134345]	Chr8:124895891..125399814 [GRCh38] Chr8:125908133..126412056 [GRCh37] Chr8:125977314..126481238 [NCBI36] Chr8:8q24.13	uncertain significance
GRCh38/hg38 8q21.3-24.23(chr8:86300584-137022587)x3	copy number gain	See cases [RCV000135621]	Chr8:86300584..137022587 [GRCh38] Chr8:87312813..138034830 [GRCh37] Chr8:87381929..138104012 [NCBI36] Chr8:8q21.3-24.23	pathogenic\|likely pathogenic
GRCh38/hg38 8q24.13-24.3(chr8:124498498-145068712)x3	copy number gain	See cases [RCV000137346]	Chr8:124498498..145068712 [GRCh38] Chr8:125510739..146294098 [GRCh37] Chr8:125579920..146264902 [NCBI36] Chr8:8q24.13-24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3	copy number gain	See cases [RCV000138643]	Chr8:241605..145054781 [GRCh38] Chr8:191605..146280167 [GRCh37] Chr8:181605..146250971 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q21.3-24.3(chr8:87931152-145068712)x3	copy number gain	See cases [RCV000138551]	Chr8:87931152..145068712 [GRCh38] Chr8:88943380..146294098 [GRCh37] Chr8:89012496..146264902 [NCBI36] Chr8:8q21.3-24.3	pathogenic
GRCh38/hg38 8q21.13-24.3(chr8:77480050-145068712)x3	copy number gain	See cases [RCV000139036]	Chr8:77480050..145068712 [GRCh38] Chr8:78392286..146294098 [GRCh37] Chr8:78554841..146264902 [NCBI36] Chr8:8q21.13-24.3	pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:97382873-145070385)x3	copy number gain	See cases [RCV000140447]	Chr8:97382873..145070385 [GRCh38] Chr8:98395101..146295771 [GRCh37] Chr8:98464277..146266575 [NCBI36] Chr8:8q22.1-24.3	pathogenic
GRCh38/hg38 8q11.1-24.3(chr8:46031340-139285494)x3	copy number gain	See cases [RCV000139539]	Chr8:46031340..139285494 [GRCh38] Chr8:46942962..140297737 [GRCh37] Chr8:47062127..140366919 [NCBI36] Chr8:8q11.1-24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3	copy number gain	See cases [RCV000141808]	Chr8:208048..145070385 [GRCh38] Chr8:158048..146295771 [GRCh37] Chr8:148048..146266575 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q22.3-24.3(chr8:100867343-145070385)x3	copy number gain	See cases [RCV000141694]	Chr8:100867343..145070385 [GRCh38] Chr8:101879571..146295771 [GRCh37] Chr8:101948747..146266575 [NCBI36] Chr8:8q22.3-24.3	pathogenic
GRCh38/hg38 8p21.3-q24.3(chr8:21291522-145070385)x3	copy number gain	See cases [RCV000142021]	Chr8:21291522..145070385 [GRCh38] Chr8:21149033..146295771 [GRCh37] Chr8:21193313..146266575 [NCBI36] Chr8:8p21.3-q24.3	pathogenic
GRCh38/hg38 8q22.3-24.3(chr8:103306336-145068712)x3	copy number gain	See cases [RCV000142810]	Chr8:103306336..145068712 [GRCh38] Chr8:104318564..146294098 [GRCh37] Chr8:104387740..146264902 [NCBI36] Chr8:8q22.3-24.3	pathogenic\|likely pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3	copy number gain	See cases [RCV000142858]	Chr8:226452..145068712 [GRCh38] Chr8:176452..146294098 [GRCh37] Chr8:166452..146264902 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q21.13-24.3(chr8:78614077-145054634)x3	copy number gain	See cases [RCV000142597]	Chr8:78614077..145054634 [GRCh38] Chr8:79526312..146280020 [GRCh37] Chr8:79688867..146250824 [NCBI36] Chr8:8q21.13-24.3	pathogenic
GRCh38/hg38 8q21.2-24.3(chr8:85765999-145070385)x3	copy number gain	See cases [RCV000143659]	Chr8:85765999..145070385 [GRCh38] Chr8:86778228..146295771 [GRCh37] Chr8:86863079..146266575 [NCBI36] Chr8:8q21.2-24.3	pathogenic
GRCh38/hg38 8q24.13-24.3(chr8:124514090-145054634)x3	copy number gain	See cases [RCV000148117]	Chr8:124514090..145054634 [GRCh38] Chr8:125526331..146280020 [GRCh37] Chr8:125595512..146250824 [NCBI36] Chr8:8q24.13-24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3	copy number gain	See cases [RCV000148092]	Chr8:241530..145054634 [GRCh38] Chr8:191530..146280020 [GRCh37] Chr8:181530..146250824 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q23.3-24.3(chr8:113580402-145054634)x3	copy number gain	See cases [RCV000050638]	Chr8:113580402..145054634 [GRCh38] Chr8:114592631..146280020 [GRCh37] Chr8:114661807..146250824 [NCBI36] Chr8:8q23.3-24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3	copy number gain	See cases [RCV000051206]	Chr8:241530..145049449 [GRCh38] Chr8:191530..146274835 [GRCh37] Chr8:181530..146245639 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q24.13(chr8:124125245-125337217)x3	copy number gain	See cases [RCV000050762]	Chr8:124125245..125337217 [GRCh38] Chr8:125137486..126349459 [GRCh37] Chr8:125206667..126418641 [NCBI36] Chr8:8q24.13	pathogenic
GRCh38/hg38 8q22.1-24.3(chr8:95606052-145054775)x3	copy number gain	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053677]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053677]\|See cases [RCV000053677]	Chr8:95606052..145054775 [GRCh38] Chr8:96618280..146280161 [GRCh37] Chr8:96687456..146250965 [NCBI36] Chr8:8q22.1-24.3	pathogenic
GRCh38/hg38 8q24.13-24.3(chr8:124514090-145054634)x3	copy number gain	See cases [RCV000053678]	Chr8:124514090..145054634 [GRCh38] Chr8:125526331..146280020 [GRCh37] Chr8:125595512..146250824 [NCBI36] Chr8:8q24.13-24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3	copy number gain	See cases [RCV000053602]	Chr8:241530..145054634 [GRCh38] Chr8:191530..146280020 [GRCh37] Chr8:181530..146250824 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3	copy number gain	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]\|See cases [RCV000053604]	Chr8:244417..145054775 [GRCh38] Chr8:194417..146280161 [GRCh37] Chr8:184417..146250965 [NCBI36] Chr8:8p23.3-q24.3	pathogenic
GRCh38/hg38 8q23.3-24.21(chr8:113288454-126716087)x1	copy number loss	See cases [RCV000054301]	Chr8:113288454..126716087 [GRCh38] Chr8:114300683..127728332 [GRCh37] Chr8:114369859..127797514 [NCBI36] Chr8:8q23.3-24.21	pathogenic
GRCh38/hg38 8q23.3-24.23(chr8:115586904-135607135)x3	copy number gain	Neurodevelopmental disorder [RCV003327615]	Chr8:115586904..135607135 [GRCh38] Chr8:8q23.3-24.23	pathogenic

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	646
Count of miRNA genes:	442
Interacting mature miRNAs:	463
Transcripts:	ENST00000504665, ENST00000510897, ENST00000525292, ENST00000528090, ENST00000529135, ENST00000529478, ENST00000530549, ENST00000532713, ENST00000533286
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

adipose tissue

appendage

entire extraembryonic component

High

Medium

320

Low

164

113

1269

441

309

114

673

Below cutoff

1778

1801

1471

387

781

340

2433

1764

3397

298

492

1121

994

1690

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NR_027321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC009908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC100858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK056899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC033393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC043249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068270	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB071196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	OA989145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	OA989146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	OA989147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000504665

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,944,179 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000510897

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,055 - 124,951,099 (+)	Ensembl

RefSeq Acc Id:

ENST00000525292

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,848,613 - 124,850,696 (+)	Ensembl

RefSeq Acc Id:

ENST00000528090

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,848,766 - 124,944,612 (+)	Ensembl

RefSeq Acc Id:

ENST00000529135

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,074 - 124,954,859 (+)	Ensembl

RefSeq Acc Id:

ENST00000529478

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,272 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000530549

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,294 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000532713

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,528 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000533286

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,965 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000653724

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,938,325 - 124,954,854 (+)	Ensembl

RefSeq Acc Id:

ENST00000653797

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,205 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000654275

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,008 - 124,954,853 (+)	Ensembl

RefSeq Acc Id:

ENST00000654344

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,503 - 124,951,094 (+)	Ensembl

RefSeq Acc Id:

ENST00000654805

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,848,671 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000655319

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,980 - 124,951,097 (+)	Ensembl

RefSeq Acc Id:

ENST00000655637

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,848,620 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000655947

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,943,912 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000656062

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,313 - 124,951,097 (+)	Ensembl

RefSeq Acc Id:

ENST00000656094

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,025 - 124,962,531 (+)	Ensembl

RefSeq Acc Id:

ENST00000656280

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,325 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000656339

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,946 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000656467

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,990 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000656616

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,791 - 124,951,514 (+)	Ensembl

RefSeq Acc Id:

ENST00000656869

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,523 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000657296

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,849,044 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000657463

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,823,702 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000657718

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,044 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000657752

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,847,714 - 124,910,326 (+)	Ensembl

RefSeq Acc Id:

ENST00000657807

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,788 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000658039

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,937,500 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000658171

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,946 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000658422

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,908 - 124,954,855 (+)	Ensembl

RefSeq Acc Id:

ENST00000659472

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,068 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000659706

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,330 - 124,954,854 (+)	Ensembl

RefSeq Acc Id:

ENST00000660004

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,008 - 124,951,097 (+)	Ensembl

RefSeq Acc Id:

ENST00000660300

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,848,742 - 124,951,173 (+)	Ensembl

RefSeq Acc Id:

ENST00000660364

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,014 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000660517

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,980 - 124,951,097 (+)	Ensembl

RefSeq Acc Id:

ENST00000661165

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,848,598 - 124,951,176 (+)	Ensembl

RefSeq Acc Id:

ENST00000661407

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,934 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000661433

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,943,355 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000661949

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,944,141 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000662253

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,508 - 124,951,093 (+)	Ensembl

RefSeq Acc Id:

ENST00000662376

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,015 - 124,951,097 (+)	Ensembl

RefSeq Acc Id:

ENST00000662419

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,943,204 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000662674

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,976 - 124,954,851 (+)	Ensembl

RefSeq Acc Id:

ENST00000663062

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,008 - 124,954,854 (+)	Ensembl

RefSeq Acc Id:

ENST00000663141

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,945 - 124,954,859 (+)	Ensembl

RefSeq Acc Id:

ENST00000663195

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,847,701 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000663231

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,014 - 124,954,855 (+)	Ensembl

RefSeq Acc Id:

ENST00000663450

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,943,183 - 124,951,094 (+)	Ensembl

RefSeq Acc Id:

ENST00000663475

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,626 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000663642

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,278 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000663765

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,023 - 124,951,096 (+)	Ensembl

RefSeq Acc Id:

ENST00000663920

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,960 - 124,951,175 (+)	Ensembl

RefSeq Acc Id:

ENST00000663922

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,008 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000663940

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,848,735 - 124,951,173 (+)	Ensembl

RefSeq Acc Id:

ENST00000663965

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,848,620 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000664110

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,503 - 124,951,097 (+)	Ensembl

RefSeq Acc Id:

ENST00000664218

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,847,889 - 124,850,692 (+)	Ensembl

RefSeq Acc Id:

ENST00000664707

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,872 - 124,951,097 (+)	Ensembl

RefSeq Acc Id:

ENST00000664851

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,982 - 124,951,094 (+)	Ensembl

RefSeq Acc Id:

ENST00000665263

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,044 - 124,951,093 (+)	Ensembl

RefSeq Acc Id:

ENST00000665293

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,008 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000665389

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,990 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000665494

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,068 - 124,954,852 (+)	Ensembl

RefSeq Acc Id:

ENST00000666477

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,847,680 - 124,869,335 (+)	Ensembl

RefSeq Acc Id:

ENST00000666508

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,838,980 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000666745

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,940,369 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000667269

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,868,012 - 124,951,097 (+)	Ensembl

RefSeq Acc Id:

ENST00000667605

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,008 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

ENST00000668837

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,364 - 124,954,851 (+)	Ensembl

RefSeq Acc Id:

ENST00000669297

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,847,680 - 124,850,696 (+)	Ensembl

RefSeq Acc Id:

ENST00000669524

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,994 - 124,951,093 (+)	Ensembl

RefSeq Acc Id:

ENST00000670035

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,035 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000670165

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,173 - 124,951,094 (+)	Ensembl

RefSeq Acc Id:

ENST00000670200

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,942 - 124,951,517 (+)	Ensembl

RefSeq Acc Id:

ENST00000670322

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,933 - 124,954,853 (+)	Ensembl

RefSeq Acc Id:

ENST00000670566

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,938 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000670706

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,008 - 124,951,097 (+)	Ensembl

RefSeq Acc Id:

ENST00000670950

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,025 - 124,951,096 (+)	Ensembl

RefSeq Acc Id:

ENST00000671263

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,941,985 - 124,951,177 (+)	Ensembl

RefSeq Acc Id:

ENST00000671628

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	8	124,942,850 - 124,951,095 (+)	Ensembl

RefSeq Acc Id:

NR_027321

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	8	124,942,008 - 124,951,095 (+)	NCBI
GRCh37	8	125,954,250 - 125,963,337 (+)	NCBI
HuRef	8	121,277,710 - 121,286,794 (+)	NCBI
CHM1_1	8	125,994,524 - 126,003,611 (+)	NCBI
T2T-CHM13v2.0	8	126,075,510 - 126,084,597 (+)	NCBI

Sequence:

show sequence

AGAAGTGACATATGCAGCATGACCAGTGGAAGCTTCGAAGAGCTATTGCCAATTTCCACCCTCT
CTCTGGAAACTGTCATTAGGGTTAGGGAAACTGTCATGAGATCTGCATATTTTAGATAGAGGCT
GCTTGCCTTATTTGGGCACCTAATGAAAAAGACATGGAGGCCAGGTGCGGTGGCTCATGTCTGT
AATCCCAGCACTTTGGGAGGCCAAGGCGAGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCC
TGACCAACATGGCAAAACCCCGTCTGTACTAAAAGTGCAAACACAAAGGGAACTGCGTGGCTTG
TTTCTACCTGAACATTGTCAAGTGATTTCATCCTTTGAAACACAGTTGTGAAGTGTGTCCAGCA
GTCTGAGAACAAGAAGAAGAAGAAAATCTAATCCTTCAGGGTGTCTGTGTGCCAGCCCTGCTCT
CAGCACTTCCCATGTGGAACTCCTTTACTTCTCCTAACAACTCCATGACATGGGTTAGACTGTG
ATTGTTCCCATATTGTTGGTAGGGAAACTGAGGCATGCAGGTGTTACAGAGCTCTCTCAAGTGG
CAAGCTTTCTGGGTGGTTACAGAGTGGCAGAGCTGGGGTATCCCATGATGTCACCACACTGCTA
TATGGAAAAGAACATTAATCGAGCACCTACGTGCTTGATTCTCTTAATTCTGTGACTGAACTCT
CAAAACACCCTGGGTTGGTTTCCTTTTTACAACTGCCCAAGTCATGAGTTCATAGGGCCTGGAT
GGCTGTACCGGATTGCTCTCCAGCTGGTCTCTCTGCATCCAGAAATTTCTACAACCTACTGGGG
TAAAATCTTTCTCAACCCTGCTTTTCATCATCACATCTTAAATATCTCGAGTTGGTTCCCTATT
GCCAAAAAAAATCCATTGTCCATGTAGGGTTCTTCTGCCGAAACGAGGAAAGAGTGAGTTAAAT
GTTGGTAGGTGATATAGAGATAGTAATTAGGCAATATAATTCGATGTTGTTGAAAGAGCTGAGC
TATGAAATGCATTGTGATAAAGGGGCTGCCTGTGTAAGTAAATGGGTATAATGAGGTGTAAAAC
TCCCTTTCTCTCTCTCTTTCTGCTTCATAAGCCTTTCTGCTTCTCAAGTCCAGACCTGCTGTTT
TTGGGGTTTCCTTCCAATTTTTTTGCTGCTTCCCTGGGGCCTTGGCTCTTGGGCCTGCTGCCTC
TTCCCACTCTACACCTTTGGATTCCTTATCTTTGGCTCCACCTTATTGCTCCATTCTCCAAAGA
CAAATCCACAAGGCATAGGATTTTACAGAATATGGGGTTACAGAAACAGCATAGGGAAGTGTAA
AAGCCTAGAAGCTTCTTACAGACGCAGCCCCTTGTCTGTAGCTCCTGACTCCCACTTAAATGTC
TGTTGGAAGCACCCTGGGGTAGCAGAACCCAGCTCAGAAGATGGGGCTTATCCACCATGCCTTT
TCCTAACCTGACACCCACCCAGATAATCTTTTCAATATGCAAACTAGAGCGTATCACCCCCTGC
TCAGAGCCTTTCTGTGACCTCCCATTTTGCTTCCCAGGACTCCTTGCTCCTTAGCCAGGTCTCC
AGGTCCTCCGTGATCAGGTCTCTGCTCTTCTGCAGCCTCATCTCTGCCATTCTTCACCTTTTGT
GCTCCAACCCAATCTGGTTTTCTTCTCATGCTTTGAACACCCCAAGTCTGTCTGCTTCAGGAGC
TTCGTACTGGCTAATCATTCACCACAGCATACTCCCATCTATACGGCTGGCTCTTATATTATGG
GTCTCAGCTAAAATGTCATCCCTTCAAAGAGACCTTCTTGGACCACCCCCGCCATTCTCTATCC
TATTTCTCTCTTTTATTTTCTTTGAAGCACTTACCCACTTTCAGAAACTATCTGGCTTGCTCAT
GTGTTTGTCTCTAGATTGTCTACTTCCCCTCCTAGACTGTACTCTCCACAAGAGAGCAAAGCTG
TGTCTGTTGCATTCACTGTTGTCTTCCCAGAAGCAAGCAGCATGCTGGAGACCCTCAAATACAT
GTGAAATGAAGGGACACCTTGTGTTATTTCACCTGTTTCCACCTGGTTCCCAAGTGGCAAGCTT
GCATTGAGGTTACAAAGTGGCAAAGCTGGGATATCACATGATGTCACCATGATGCTATATGAAA
TGTAACATTAATTGAGTACCTATGTGACCAGTTCTTTAATTCTGTAAGTGAACTCTCAAAAAAC
CCTAGGTAAGTATTATCAACTCGAACTTTAACGGATGAGGAAACTGGAATTTTTTAAAAAATGA
CTTAACCAAACATCACAGAGCTGTAAACCAGGATTTGAATGGGTGAGCTGCACTCAGCCTTCAT
CTCAAGTCAGTTTGCCTCTTTCTCCAAGAAGCCACAGTTGATCCTGACCACATCACATATGAGT
TGCCTGGATTGCAGTCATTCATTCACTAAGCATCTTTTAGGAGGTCACATGCCAGGCACCGTGT
TAGGTAATGATTTCTCCAAGTCACAGGAGCCGTGGTTCTGACTTTAGAAAGTTTCTCATCTGAT
GGGAGGGCAGGCAAGTAAATCAGTAAGGGTGGTCCCTGTCGGGACACTGGTTGAGAAATACCCA
GGAACACTCTGATTGAGAAATACCCAAAGTGCAAAGTGACAGGGACTAGAGGCATCTCCACTGG
ACCAGAGAGCTCTGGATTCGTCTTGAGCTAAGTCTCTGGAGGTAGGTGTCAGCTACAAGGAGAA
AAGCTGTATATTTTGAGATATGGGATGCAGGGCCTTTTAGTTCCATAAATAAGAGAACTATGGT
GTGAATACCACATGCCCTGGGCTGAACTAAGTGGGCTCTAGGGGAAGGTATACTGGGCAGGGAG
TTTGGAGAACTGGTTTCTGTCTAATCCTTCTCTAACTCTGTGACCTTGAATGCATCATTTCCCC
TCTGAGTCTCAGATTCTCTTTCTGGCTGGCATTTAATGAAACCTAAATATTCTAGACCTTCTAC
TTGTTCCATAAGTGCTCAGTCCTACACTCACTCTCCTCTGGCACCAATATACTGATTACTCATT
TTATGCCCAGCAGAGCACTGCGTGTTTTGAAATATACAAATAGTGGGAAACGAAATCTTTGTTC
TGGATGCAGTTATAATTTGGAAAGCGAGGAAATAAATTATAACAAGGGGAAAAAACAGACACAG
AGGGATTGAAATGCATAACAATAGAGATGAAACACGAAGAGTGATAAATGAAGATTGAGTGTGC
ACACCTTCTGGAGGAGCCCTGATTGAGTATTTTAAAATACTACTAAAGTCATGCCGTGTGACTT
CTGAAGCTAGCTCCTAAGAAGTCCTTGCAGCTTCTGCCTGCGACTCTTAGAACACTTGCTTTGA
AGGATGCCAGATGCTGTCTTAAAAGTCTGAGCACTCTGAAACCATCATGCTGTGAGGAAGCCCA
AGCTAACCACATGGGCAAAAAAGATGCCCTCTGACTGCCACCATTTGAGACACTCTAATTAAGA
ACTGCCTCATTGAGCCCATGAGGCCCTGTGAATGATAATAATAAATTGTTTTTAACCACAAAAA
AAAAAAAAAAA

hide sequence

Additional Information

External Database Links

Database	Acc Id	Source(s)
COSMIC	LINC00964	COSMIC
Ensembl Genes	ENSG00000249816	Ensembl, ENTREZGENE
Ensembl Transcript	ENST00000510897	ENTREZGENE
GTEx	ENSG00000249816	GTEx
HGNC ID	HGNC:27226	ENTREZGENE
Human Proteome Map	LINC00964	Human Proteome Map
NCBI Gene	LINC00964	ENTREZGENE
RNAcentral	URS000075AC1C	RNACentral

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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