Pde7a (phosphodiesterase 7A) - Rat Genome Database

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Gene: Pde7a (phosphodiesterase 7A) Mus musculus
Analyze
Symbol: Pde7a
Name: phosphodiesterase 7A
RGD ID: 68571
MGI Page MGI
Description: Enables 3',5'-cyclic-AMP phosphodiesterase activity. Predicted to be involved in cAMP-mediated signaling. Predicted to be located in cytosol. Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system; and sensory organ. Orthologous to human PDE7A (phosphodiesterase 7A).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AU015378; AW047537; cAMP-specific phosphodiesterase 7A; high affinity 3',5'-cyclic-AMP phosphodiesterase 7A; high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A; P2A
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39319,277,272 - 19,365,486 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl319,277,272 - 19,365,486 (-)EnsemblGRCm39 Ensembl
GRCm38319,223,108 - 19,311,322 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl319,223,108 - 19,311,322 (-)EnsemblGRCm38mm10GRCm38
MGSCv37319,125,918 - 19,211,322 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36319,418,069 - 19,457,108 (-)NCBIMGSCv36mm8
Celera319,216,511 - 19,304,588 (-)NCBICelera
Cytogenetic Map3A2NCBI
cM Map35.36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 92 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Pde7aMouse1,1-dichloroethene increases expressionEXP 6480464vinylidene chloride results in increased expression of PDE7A mRNACTDPMID:26682919
Pde7aMouse1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene multiple interactionsEXP 6480464[2 more ...CTDPMID:25510870
Pde7aMouse1,2-dimethylhydrazine decreases expressionEXP 64804641 and 2-Dimethylhydrazine results in decreased expression of PDE7A mRNACTDPMID:22206623
Pde7aMouse17beta-estradiol multiple interactionsISOPde7a (Rattus norvegicus)6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of PDE7A mRNACTDPMID:32741896
Pde7aMouse17beta-estradiol 3-benzoate multiple interactionsISOPde7a (Rattus norvegicus)6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of PDE7A mRNACTDPMID:32741896
Pde7aMouse2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsEXP 6480464[2 more ...CTDPMID:25510870
Pde7aMouse2,2',5,5'-tetrachlorobiphenyl multiple interactionsEXP 6480464[2 more ...CTDPMID:25510870
Pde7aMouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOPDE7A (Homo sapiens)6480464Tetrachlorodibenzodioxin results in decreased expression of PDE7A mRNACTDPMID:21632981
Pde7aMouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOPde7a (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of PDE7A mRNACTDPMID:33387578
Pde7aMouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISOPde7a (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of PDE7A mRNACTDPMID:34747641
Pde7aMouse2,4,4'-trichlorobiphenyl multiple interactionsEXP 6480464[2 more ...CTDPMID:25510870
Pde7aMouse2-methylcholine affects expressionISOPDE7A (Homo sapiens)6480464beta-methylcholine affects the expression of PDE7A mRNACTDPMID:21179406
Pde7aMouse3',5'-cyclic AMP multiple interactionsISOPDE7A (Homo sapiens)64804641-Methyl-3-isobutylxanthine inhibits the reaction [PDE7A protein results in increased hydrolysis of Cyclic AMP] more ...CTDPMID:10618442
Pde7aMouse3',5'-cyclic AMP increases hydrolysisISOPDE7A (Homo sapiens)6480464PDE7A protein results in increased hydrolysis of Cyclic AMPCTDPMID:10618442 and PMID:10814504
Pde7aMouse3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOPDE7A (Homo sapiens)64804641-Methyl-3-isobutylxanthine inhibits the reaction [PDE7A protein results in increased hydrolysis of Cyclic AMP]CTDPMID:10618442
Pde7aMouse4,4'-diaminodiphenylmethane decreases expressionEXP 64804644 and 4'-diaminodiphenylmethane results in decreased expression of PDE7A mRNACTDPMID:18648102
Pde7aMouse4-hydroxyphenyl retinamide decreases expressionEXP 6480464Fenretinide results in decreased expression of PDE7A mRNACTDPMID:28973697
Pde7aMouse6-propyl-2-thiouracil decreases expressionISOPde7a (Rattus norvegicus)6480464Propylthiouracil results in decreased expression of PDE7A mRNACTDPMID:30047161
Pde7aMouseacrylamide decreases expressionISOPde7a (Rattus norvegicus)6480464Acrylamide results in decreased expression of PDE7A mRNACTDPMID:28959563
Pde7aMouseaflatoxin B1 increases expressionEXP 6480464Aflatoxin B1 results in increased expression of PDE7A mRNACTDPMID:19770486

1 to 20 of 92 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Pde7aMousecAMP catabolic process involved_inIEAUniPathway:UPA007622290270 UniProtGO_REF:0000041
Pde7aMousecAMP-mediated signaling involved_inIBAPANTHER:PTN001682918 and CGD:CAL00001782662290270 GO_CentralGO_REF:0000033
Pde7aMousecAMP-mediated signaling involved_inISOUniProtKB:Q139462290270 GO_CentralGO_REF:0000119
Pde7aMousesignal transduction involved_inIEAInterPro:IPR002073 and InterPro:IPR0369712290270 InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Pde7aMousecytosol located_inIEAUniProtKB-SubCell:SL-00912290270 UniProtGO_REF:0000044

Molecular Function

  

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Pde7aMouseprotein kinase A (PKA) signaling pathway   ISOPDE7A (Homo sapiens)2312479 RGD 

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Pde7aMousepurine metabolic pathway  IEA 6907045 KEGGmmu:00230
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Pde7aMouseabnormal humoral immune response  IAGP 5509061 MGIPMID:14662840

1 to 9 of 9 rows
#
Reference Title
Reference Citation
1. Biochemistry and physiology of cyclic nucleotide phosphodiesterases: essential components in cyclic nucleotide signaling. Conti M and Beavo J, Annu Rev Biochem. 2007;76:481-511.
2. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. MGD IEA MGD IEA
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
1 to 9 of 9 rows
PMID:8889548   PMID:8943082   PMID:9521885   PMID:10349636   PMID:10922068   PMID:11027622   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12520002   PMID:14610273  
PMID:14662840   PMID:14681479   PMID:16141072   PMID:16141073   PMID:16556600   PMID:17307970   PMID:18799693   PMID:19379723   PMID:19477436   PMID:20564261   PMID:21873635   PMID:23375831  
PMID:23661015   PMID:25852085   PMID:32325033   PMID:36220621   PMID:39283715  



Pde7a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39319,277,272 - 19,365,486 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl319,277,272 - 19,365,486 (-)EnsemblGRCm39 Ensembl
GRCm38319,223,108 - 19,311,322 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl319,223,108 - 19,311,322 (-)EnsemblGRCm38mm10GRCm38
MGSCv37319,125,918 - 19,211,322 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36319,418,069 - 19,457,108 (-)NCBIMGSCv36mm8
Celera319,216,511 - 19,304,588 (-)NCBICelera
Cytogenetic Map3A2NCBI
cM Map35.36NCBI
PDE7A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38865,714,334 - 65,842,064 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl865,714,334 - 65,842,322 (-)EnsemblGRCh38hg38GRCh38
GRCh37866,626,569 - 66,754,299 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36866,793,867 - 66,916,297 (-)NCBINCBI36Build 36hg18NCBI36
Build 34866,796,607 - 66,916,297NCBI
Celera862,621,394 - 62,745,383 (-)NCBICelera
Cytogenetic Map8q13.1NCBI
HuRef862,116,681 - 62,191,314 (-)NCBIHuRef
CHM1_1866,681,227 - 66,808,574 (-)NCBICHM1_1
T2T-CHM13v2.0866,140,012 - 66,267,737 (-)NCBIT2T-CHM13v2.0
Pde7a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82103,631,655 - 103,723,057 (-)NCBIGRCr8
mRatBN7.22101,714,767 - 101,806,853 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2101,718,444 - 101,806,681 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2108,235,543 - 108,323,729 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02106,356,659 - 106,444,849 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02101,331,729 - 101,419,882 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02104,042,124 - 104,134,101 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2104,045,811 - 104,134,101 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02123,764,137 - 123,856,129 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42104,339,910 - 104,429,820 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12104,284,877 - 104,323,840 (-)NCBI
Celera297,112,400 - 97,200,488 (-)NCBICelera
Cytogenetic Map2q24NCBI
Pde7a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544413,349,405 - 13,473,388 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544413,349,405 - 13,475,827 (+)NCBIChiLan1.0ChiLan1.0
PDE7A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2781,450,201 - 81,574,754 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1857,089,749 - 57,213,598 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0862,253,137 - 62,380,198 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1863,921,520 - 64,048,462 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl863,921,520 - 64,048,273 (-)Ensemblpanpan1.1panPan2
PDE7A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12915,398,106 - 15,467,789 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2915,400,522 - 15,467,917 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2915,721,653 - 15,837,636 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02915,485,055 - 15,601,385 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2915,485,057 - 15,602,088 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12915,502,340 - 15,630,381 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02915,617,373 - 15,733,306 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02915,878,523 - 15,994,585 (-)NCBIUU_Cfam_GSD_1.0
Pde7a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530366,617,908 - 66,722,919 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364968,062,825 - 8,167,088 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364968,062,606 - 8,167,571 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PDE7A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl468,779,540 - 68,896,577 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1468,777,910 - 68,896,583 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2475,026,382 - 75,055,308 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PDE7A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1861,586,176 - 61,711,487 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl861,582,844 - 61,658,497 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603979,808,871 - 79,935,779 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pde7a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474425,651,313 - 25,803,695 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474425,651,735 - 25,806,525 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Pde7a
4485 total Variants

Predicted Target Of
Summary Value
Count of predictions:2888
Count of miRNA genes:814
Interacting mature miRNAs:1062
Transcripts:ENSMUST00000091314, ENSMUST00000099195, ENSMUST00000121951, ENSMUST00000129060, ENSMUST00000139426, ENSMUST00000141621, ENSMUST00000143120, ENSMUST00000148590, ENSMUST00000149081, ENSMUST00000156652
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 18 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
12738410Lfibq2_mliver fibrosis QTL 2 (mouse)31206506020755242Mouse
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
12798540Scvg2_msubcutaneous vessel growth QTL 2 (mouse)3744981526249645Mouse
25671383Hrsq1_mhost response to SARS QTL 1, vascular cuffing (mouse)31844095426823641Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
4142092Tgq13_mtriglyceride QTL 13 (mouse)Not determined1828816852288168Mouse

1 to 10 of 18 rows
AU015378  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38319,226,068 - 19,226,156UniSTSGRCm38
MGSCv37319,126,068 - 19,126,156UniSTSGRCm37
Celera319,216,661 - 19,216,749UniSTS
Cytogenetic Map3A2UniSTS
cM Map37.0UniSTS
Whitehead/MRC_RH3214.14UniSTS
Pde7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3A2UniSTS
cM Map37.0UniSTS
cM Map37.0UniSTS
Pde7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3A2UniSTS
cM Map37.0UniSTS
Pde7a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3A2UniSTS
cM Map37.0UniSTS






1 to 24 of 24 rows
RefSeq Transcripts NM_001122759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001428503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006535408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004941293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_389588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC102756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC118540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC127283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY007702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC062909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV558025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U68171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 24 of 24 rows

Ensembl Acc Id: ENSMUST00000091314   ⟹   ENSMUSP00000088863
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,278,846 - 19,319,172 (-)Ensembl
GRCm38.p6 Ensembl319,224,682 - 19,265,008 (-)Ensembl
Ensembl Acc Id: ENSMUST00000099195   ⟹   ENSMUSP00000096800
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,277,272 - 19,365,486 (-)Ensembl
GRCm38.p6 Ensembl319,223,108 - 19,311,322 (-)Ensembl
Ensembl Acc Id: ENSMUST00000121951   ⟹   ENSMUSP00000113173
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,290,613 - 19,319,129 (-)Ensembl
GRCm38.p6 Ensembl319,236,449 - 19,264,965 (-)Ensembl
Ensembl Acc Id: ENSMUST00000129060
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,310,858 - 19,365,468 (-)Ensembl
GRCm38.p6 Ensembl319,256,694 - 19,311,304 (-)Ensembl
Ensembl Acc Id: ENSMUST00000139426
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,281,886 - 19,287,693 (-)Ensembl
GRCm38.p6 Ensembl319,227,722 - 19,233,529 (-)Ensembl
Ensembl Acc Id: ENSMUST00000141621
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,281,549 - 19,284,192 (-)Ensembl
GRCm38.p6 Ensembl319,227,385 - 19,230,028 (-)Ensembl
Ensembl Acc Id: ENSMUST00000143120
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,310,956 - 19,365,067 (-)Ensembl
GRCm38.p6 Ensembl319,256,792 - 19,310,903 (-)Ensembl
Ensembl Acc Id: ENSMUST00000148590
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,284,525 - 19,290,661 (-)Ensembl
GRCm38.p6 Ensembl319,230,361 - 19,236,497 (-)Ensembl
Ensembl Acc Id: ENSMUST00000149081   ⟹   ENSMUSP00000120420
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,284,453 - 19,314,405 (-)Ensembl
GRCm38.p6 Ensembl319,230,289 - 19,260,241 (-)Ensembl
Ensembl Acc Id: ENSMUST00000156652   ⟹   ENSMUSP00000119685
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl319,287,969 - 19,365,216 (-)Ensembl
GRCm38.p6 Ensembl319,233,805 - 19,311,052 (-)Ensembl
RefSeq Acc Id: NM_001122759   ⟹   NP_001116231
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,277,272 - 19,365,486 (-)NCBI
GRCm38319,223,108 - 19,311,322 (-)NCBI
MGSCv37319,125,918 - 19,211,322 (-)RGD
Celera319,213,704 - 19,304,588 (-)NCBI
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_008802   ⟹   NP_032828
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,277,272 - 19,319,172 (-)NCBI
GRCm38319,223,108 - 19,265,008 (-)NCBI
MGSCv37319,125,918 - 19,211,322 (-)RGD
Celera319,213,704 - 19,304,588 (-)NCBI
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006535405   ⟹   XP_006535468
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,278,828 - 19,352,685 (-)NCBI
GRCm38319,224,664 - 19,298,521 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006535406   ⟹   XP_006535469
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,280,193 - 19,365,460 (-)NCBI
GRCm38319,226,033 - 19,311,154 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006535408   ⟹   XP_006535471
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,278,828 - 19,319,171 (-)NCBI
GRCm38319,224,664 - 19,265,016 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252456   ⟹   XP_030108316
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,280,193 - 19,365,479 (-)NCBI
GRCm38319,224,664 - 19,311,111 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162924   ⟹   XP_036018817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,278,828 - 19,365,388 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162925   ⟹   XP_036018818
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,278,828 - 19,365,222 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162926   ⟹   XP_036018819
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,278,828 - 19,319,065 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036162927   ⟹   XP_036018820
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,278,828 - 19,297,295 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004941293
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,278,828 - 19,319,221 (-)NCBI
Sequence:
RefSeq Acc Id: XR_389588
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39319,280,193 - 19,365,304 (-)NCBI
GRCm38319,226,033 - 19,311,154 (-)NCBI
Sequence:
1 to 5 of 15 rows
1 to 5 of 15 rows
RefSeq Acc Id: NP_032828   ⟸   NM_008802
- Peptide Label: isoform 1
- UniProtKB: Q3TFY5 (UniProtKB/Swiss-Prot),   Q9ERB3 (UniProtKB/Swiss-Prot),   P70453 (UniProtKB/Swiss-Prot),   Q6P5G2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001116231   ⟸   NM_001122759
- Peptide Label: isoform 2
- UniProtKB: Q3U3Y7 (UniProtKB/TrEMBL),   Q6P5G2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535468   ⟸   XM_006535405
- Peptide Label: isoform X1
- UniProtKB: Q6P5G2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006535471   ⟸   XM_006535408
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006535469   ⟸   XM_006535406
- Peptide Label: isoform X2
- Sequence:
PDEase

Name Modeler Protein Id AA Range Protein Structure
AF-P70453-F1-model_v2 AlphaFold P70453 1-456 view protein structure

RGD ID:6834211
Promoter ID:MM_KWN:33837
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney
Transcripts:OTTMUST00000074796
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36319,130,541 - 19,131,041 (-)MPROMDB
RGD ID:6834210
Promoter ID:MM_KWN:33838
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   ES_Cell,   Kidney,   MEF_B6
Transcripts:OTTMUST00000074795
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36319,133,431 - 19,133,947 (-)MPROMDB
RGD ID:6834209
Promoter ID:MM_KWN:33839
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour,   Kidney,   Liver,   MEF_B4
Transcripts:OTTMUST00000074797
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36319,136,046 - 19,137,197 (-)MPROMDB
RGD ID:6834206
Promoter ID:MM_KWN:33841
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:ENSMUST00000121951,   OTTMUST00000074789
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36319,164,631 - 19,165,131 (-)MPROMDB
RGD ID:6880304
Promoter ID:EPDNEW_M3603
Type:multiple initiation site
Name:Pde7a_1
Description:Mus musculus phosphodiesterase 7A , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38319,311,367 - 19,311,427EPDNEW


1 to 32 of 32 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000069094 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000091314 ENTREZGENE
  ENSMUST00000091314.11 UniProtKB/Swiss-Prot
  ENSMUST00000099195 ENTREZGENE
  ENSMUST00000099195.10 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.1300.10 UniProtKB/Swiss-Prot
InterPro HD/PDEase_dom UniProtKB/Swiss-Prot
  PDEase UniProtKB/Swiss-Prot
  PDEase_catalytic_dom UniProtKB/Swiss-Prot
  PDEase_catalytic_dom_sf UniProtKB/Swiss-Prot
  PDEase_CS UniProtKB/Swiss-Prot
KEGG Report mmu:18583 UniProtKB/Swiss-Prot
MGD MGI:1202402 ENTREZGENE
NCBI Gene 18583 ENTREZGENE
PANTHER CYCLIC NUCLEOTIDE PHOSPHODIESTERASE UniProtKB/Swiss-Prot
Pfam PDEase_I UniProtKB/Swiss-Prot
PhenoGen Pde7a PhenoGen
PRINTS PDIESTERASE1 UniProtKB/Swiss-Prot
PROSITE PDEASE_I_1 UniProtKB/Swiss-Prot
  PDEASE_I_2 UniProtKB/Swiss-Prot
SMART HDc UniProtKB/Swiss-Prot
Superfamily-SCOP HD-domain/PDEase-like UniProtKB/Swiss-Prot
UniProt D3Z6W6_MOUSE UniProtKB/TrEMBL
  D6RIM5_MOUSE UniProtKB/TrEMBL
  F6VJY9_MOUSE UniProtKB/TrEMBL
  P70453 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3TFY5 ENTREZGENE
  Q3U3Y7 ENTREZGENE, UniProtKB/TrEMBL
  Q6P5G2 ENTREZGENE, UniProtKB/TrEMBL
  Q9ERB3 ENTREZGENE
UniProt Secondary Q3TFY5 UniProtKB/Swiss-Prot
  Q9ERB3 UniProtKB/Swiss-Prot
1 to 32 of 32 rows