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Gene: Pde7a (phosphodiesterase 7A) Rattus norvegicus

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Symbol:

Pde7a

Name:

phosphodiesterase 7A

RGD ID:

68391

Description:

Enables cyclic-nucleotide phosphodiesterase activity. Predicted to be involved in cAMP-mediated signaling. Predicted to be located in cytosol. Orthologous to human PDE7A (phosphodiesterase 7A); PARTICIPATES IN protein kinase A (PKA) signaling pathway; purine metabolic pathway; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cAMP-specific phosphodiesterase 7A; high affinity 3',5'-cyclic-AMP phosphodiesterase 7A; high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE7-1; rolipram-insensitive phosphodiesterase type 7

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PDE7A (phosphodiesterase 7A)	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Pde7a (phosphodiesterase 7A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pde7a (phosphodiesterase 7A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PDE7A (phosphodiesterase 7A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PDE7A (phosphodiesterase 7A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pde7a (phosphodiesterase 7A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PDE7A (phosphodiesterase 7A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PDE7A (phosphodiesterase 7A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pde7a (phosphodiesterase 7A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CHDH (choline dehydrogenase)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	PDE7A (phosphodiesterase 7A)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Pde7a (phosphodiesterase 7A)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pde7a (phosphodiesterase 7A)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pde7a	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	103,631,655 - 103,723,057 (-)	NCBI		GRCr8
mRatBN7.2	2	101,714,767 - 101,806,853 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	101,718,444 - 101,806,681 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	108,235,543 - 108,323,729 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	106,356,659 - 106,444,849 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	101,331,729 - 101,419,882 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	104,042,124 - 104,134,101 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	104,045,811 - 104,134,101 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	123,764,137 - 123,856,129 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	104,339,910 - 104,429,820 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	104,284,877 - 104,323,840 (-)	NCBI
Celera	2	97,112,400 - 97,200,488 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

17beta-estradiol 3-benzoate (EXP)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-methylcholine (ISO)

3',5'-cyclic AMP (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

ammonium chloride (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

Azoxymethane (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bortezomib (ISO)

butanal (ISO)

cadmium sulfate (ISO)

CGP 52608 (ISO)

cobalt dichloride (ISO)

copper atom (EXP)

copper(0) (EXP)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dextran sulfate (ISO)

dipyridamole (ISO)

disodium selenite (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

ethanol (ISO)

FR900359 (ISO)

isoprenaline (ISO)

lead(II) chloride (ISO)

manganese(II) chloride (EXP)

methapyrilene (ISO)

methimazole (EXP)

methoxychlor (EXP)

methylmercury chloride (ISO)

methylparaben (ISO)

N-methyl-4-phenylpyridinium (EXP)

nickel atom (ISO)

papaverine (ISO)

paracetamol (ISO)

PCB138 (ISO)

pentanal (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

roflumilast (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

succimer (ISO)

sulfadimethoxine (EXP)

Tesaglitazar (EXP)

testosterone (EXP)

testosterone enanthate (EXP)

thiram (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cAMP catabolic process (IEA)

cAMP-mediated signaling (IBA)

signal transduction (IEA)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

Molecular Function

3',5'-cyclic-AMP phosphodiesterase activity (IBA,IEA,ISO)

3',5'-cyclic-GMP phosphodiesterase activity (IBA)

3',5'-cyclic-nucleotide phosphodiesterase activity (IEA)

cyclic-nucleotide phosphodiesterase activity (IMP)

hydrolase activity (IEA)

metal ion binding (IEA)

phosphoric diester hydrolase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

protein kinase A (PKA) signaling pathway (ISO)

purine metabolic pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Biochemistry and physiology of cyclic nucleotide phosphodiesterases: essential components in cyclic nucleotide signaling.	Conti M and Beavo J, Annu Rev Biochem. 2007;76:481-511.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Differential distribution of rat PDE-7 mRNA in embryonic and adult rat brain.	Hoffmann R, etal., Cell Biochem Biophys 1998;28(2-3):103-13.
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	Differential distribution of cAMP-specific phosphodiesterase 7A mRNA in rat brain and peripheral organs.	Miro X, etal., Synapse 2001 Jun;40(3):201-14.
7.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
8.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
9.	GOA pipeline	RGD automated data pipeline
10.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
11.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
12.	Pharmacological profile of a novel phosphodiesterase 7A and -4 dual inhibitor, YM-393059, on acute and chronic inflammation models.	Yamamoto S, etal., Eur J Pharmacol. 2006 Nov 21;550(1-3):166-72. Epub 2006 Aug 30.

Additional References at PubMed

PMID:8943082	PMID:27538853

Genomics

Comparative Map Data

Pde7a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	103,631,655 - 103,723,057 (-)	NCBI		GRCr8
mRatBN7.2	2	101,714,767 - 101,806,853 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	101,718,444 - 101,806,681 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	108,235,543 - 108,323,729 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	106,356,659 - 106,444,849 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	101,331,729 - 101,419,882 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	104,042,124 - 104,134,101 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	104,045,811 - 104,134,101 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	123,764,137 - 123,856,129 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	104,339,910 - 104,429,820 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	104,284,877 - 104,323,840 (-)	NCBI
Celera	2	97,112,400 - 97,200,488 (-)	NCBI		Celera
Cytogenetic Map	2	q24	NCBI

PDE7A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	65,714,334 - 65,842,064 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	65,714,334 - 65,842,322 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	66,626,569 - 66,754,299 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	66,793,867 - 66,916,297 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	8	66,796,607 - 66,916,297	NCBI
Celera	8	62,621,394 - 62,745,383 (-)	NCBI		Celera
Cytogenetic Map	8	q13.1	NCBI
HuRef	8	62,116,681 - 62,191,314 (-)	NCBI		HuRef
CHM1_1	8	66,681,227 - 66,808,574 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	66,140,012 - 66,267,737 (-)	NCBI		T2T-CHM13v2.0

Pde7a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	19,277,272 - 19,365,486 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	19,277,272 - 19,365,486 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	19,223,108 - 19,311,322 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	19,223,108 - 19,311,322 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	19,125,918 - 19,211,322 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	19,418,069 - 19,457,108 (-)	NCBI		MGSCv36	mm8
Celera	3	19,216,511 - 19,304,588 (-)	NCBI		Celera
Cytogenetic Map	3	A2	NCBI
cM Map	3	5.36	NCBI

Pde7a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955444	13,349,405 - 13,473,388 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955444	13,349,405 - 13,475,827 (+)	NCBI	ChiLan1.0	ChiLan1.0

PDE7A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	81,450,201 - 81,574,754 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	57,089,749 - 57,213,598 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	62,253,137 - 62,380,198 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	63,921,520 - 64,048,462 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	63,921,520 - 64,048,273 (-)	Ensembl	panpan1.1		panPan2

PDE7A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	29	15,398,106 - 15,467,789 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	29	15,400,522 - 15,467,917 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	29	15,721,653 - 15,837,636 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	29	15,485,055 - 15,601,385 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	29	15,485,057 - 15,602,088 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	29	15,502,340 - 15,630,381 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	29	15,617,373 - 15,733,306 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	29	15,878,523 - 15,994,585 (-)	NCBI		UU_Cfam_GSD_1.0

Pde7a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	66,617,908 - 66,722,919 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936496	8,062,825 - 8,167,088 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936496	8,062,606 - 8,167,571 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PDE7A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	68,779,540 - 68,896,577 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	68,777,910 - 68,896,583 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	75,026,382 - 75,055,308 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PDE7A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	61,586,176 - 61,711,487 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	61,582,844 - 61,658,497 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	79,808,871 - 79,935,779 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pde7a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624744	25,651,313 - 25,803,695 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624744	25,651,735 - 25,806,525 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Pde7a
248 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	262
Count of miRNA genes:	167
Interacting mature miRNAs:	185
Transcripts:	ENSRNOT00000067725
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578777	Stresp15	Stress response QTL 15	2	0.05	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	2	59846005	104846005	Rat
2293671	Bss44	Bone structure and strength QTL 44	10.97	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	2	43162366	148478373	Rat
1298074	Bp164	Blood pressure QTL 164		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
1598865	Bp296	Blood pressure QTL 296	2.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	81018907	126018907	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
1578772	Stresp14	Stress response QTL 14	5	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	2	82345893	130923501	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
2293676	Bmd19	Bone mineral density QTL 19	10.7	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	2	43162366	111362592	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	18960362	228801039	Rat
2293682	Bmd24	Bone mineral density QTL 24	8.9	0.0001	femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	2	43162366	111362592	Rat
152025242	Bw191	Body weight QTL 191	3.62		body mass (VT:0001259)		2	38573329	122609194	Rat
1598862	Glom9	Glomerulus QTL 9	3.5		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	2	92337601	137337601	Rat
631198	Cm22	Cardiac mass QTL 22	4.3	0.0008	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	2	76539322	150540526	Rat
1598863	Cm65	Cardiac mass QTL 65	2.3		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	92337601	137337601	Rat
1302794	Stl27	Serum triglyceride level QTL 27	4.4	0.0001	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	2	25413423	143657569	Rat
61465	Bp13	Blood pressure QTL 13	3.3		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	2	76539322	102785628	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		0.0001	urine protein amount (VT:0005160)	urine albumin excretion rate (CMO:0000757)	2	78665619	219826953	Rat
61467	Bp14	Blood pressure QTL 14	2.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	43154682	202446871	Rat
70174	BpQTLCluster2	Blood pressure QTL cluster 2	4.24		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	2	40067944	102785628	Rat
1358901	Cm38	Cardiac mass QTL 38	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	56043031	202447032	Rat
2300165	Bmd49	Bone mineral density QTL 49	4.8	0.0001	lumbar vertebra mineral mass (VT:0010511)	bone mineral density (CMO:0001226)	2	88862519	133862519	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358908	Bw49	Body weight QTL 49	3.36		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
5684990	Bmd82	Bone mineral density QTL 82	2.8		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	2	59324377	103795077	Rat
2300170	Bmd45	Bone mineral density QTL 45	12.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
61355	Bp36	Blood pressure QTL 36	2.9		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	2	5873687	102844969	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	157142209	Rat
7411551	Bw131	Body weight QTL 131	29.6	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	2	67942638	112942638	Rat
1358887	Bw50	Body weight QTL 50	2.39		body mass (VT:0001259)	body weight (CMO:0000012)	2	25413652	157142078	Rat
1298080	Bp163	Blood pressure QTL 163		0.02	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118275	202447032	Rat
8662832	Vetf7	Vascular elastic tissue fragility QTL 7	3.5		aorta elastin amount (VT:0003905)	aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)	2	81689826	221035911	Rat
1298085	Bp165	Blood pressure QTL 165		0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	42804607	202447032	Rat
2290453	Scl55	Serum cholesterol level QTL 55	2.83		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	26917817	136917119	Rat
2299162	Iddm32	Insulin dependent diabetes mellitus QTL 32	2.36		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	2	78665616	143657569	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	25413423	157142209	Rat
2300185	Bmd46	Bone mineral density QTL 46	8.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	88862519	133862519	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	0.86	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	2	76539322	202447032	Rat
631500	Bp99	Blood pressure QTL 99	2.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	59324719	102755241	Rat
61392	Bp6	Blood pressure QTL 6	7		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	2	80270434	125270434	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
5684996	Bmd85	Bone mineral density QTL 85	4.7	0.024	tibia mineral mass (VT:1000283)	bone mineral density (CMO:0001226)	2	59324377	103795077	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	2	25413423	203928301	Rat
2293835	Kiddil5	Kidney dilation QTL 5	3.8		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	157142209	Rat
1558653	Prcr1	Prostate cancer resistance QTL 1	5		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	2	72532993	157142209	Rat
1354622	Kidm16	Kidney mass QTL 16	3		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	2	81754530	222436696	Rat
631266	Bp132	Blood pressure QTL 132		0.0005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	46123260	202447032	Rat
7207808	Bmd89	Bone mineral density QTL 89	4.1		femur strength trait (VT:0010010)	femoral neck ultimate force (CMO:0001703)	2	88862519	133862519	Rat
1558648	Smcn1	Smooth muscle cell number QTL 1		0.039	blood vessel smooth muscle cell quantity (VT:0010525)	aorta smooth muscle cell count per unit vessel length (CMO:0001646)	2	59134147	127460910	Rat
2293843	Kiddil6	Kidney dilation QTL 6	3.1		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	42804607	182042367	Rat
2306903	Bp336	Blood pressure QTL 336		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	64366971	109366971	Rat
152025206	Hrtrt23	Heart rate QTL 23	5.98		heart pumping trait (VT:2000009)		2	28484589	169504100	Rat
1354605	Rf48	Renal function QTL 48	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	2	74786664	206665859	Rat
152025204	Hrtrt22	Heart rate QTL 22	5.6		heart pumping trait (VT:2000009)		2	28484589	169504100	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	2	43171017	184114403	Rat
61438	Cia7	Collagen induced arthritis QTL 7	4.6	0.0001	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	2	59324377	141596857	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	26917817	127469484	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_031080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006232188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008760880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039103228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063282631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005500379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U77880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000067725 ⟹ ENSRNOP00000060777

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	101,718,444 - 101,806,681 (-)	Ensembl
Rnor_6.0 Ensembl	2	104,045,811 - 104,134,101 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000088167 ⟹ ENSRNOP00000069695

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	101,720,108 - 101,760,966 (-)	Ensembl
Rnor_6.0 Ensembl	2	104,048,554 - 104,133,985 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094659 ⟹ ENSRNOP00000091687

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	101,731,008 - 101,760,966 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108651 ⟹ ENSRNOP00000086827

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	101,718,444 - 101,760,966 (-)	Ensembl

RefSeq Acc Id:

NM_031080 ⟹ NP_112342

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	103,634,594 - 103,722,827 (-)	NCBI
mRatBN7.2	2	101,718,444 - 101,806,681 (-)	NCBI
Rnor_6.0	2	104,045,811 - 104,134,101 (-)	NCBI
Rnor_5.0	2	123,764,137 - 123,856,129 (-)	NCBI
RGSC_v3.4	2	104,339,910 - 104,429,820 (-)	RGD
Celera	2	97,112,400 - 97,200,488 (-)	RGD

Sequence:

show sequence

CGGCCGCCAGCGCCGCCCGCCCCGCGCGCGCCTCGGCCCCGGGTCCCCGCGGCGCGGCCCCCTC
GTAGCGCAGGGGCGGGCGACCGCGGACTGGCGGGCGCCGCGCGGTTCCAAGGCGGACGTGTTCA
ATGGAAGTATGCTACCAGCTGCCGGTGCTGCCCCTGGACAGGCCGGTCCCCCAGCACGTCCTCA
GCCGCCGAGGAGCCATCAGCTTCAGCTCCAGCTCGGCGCTCTTCGGCTGCCCGCATCCCCGGCA
GCTCTCGCAGAGACGTGGAGCTATTTCCTATGACAGTTCTGATCAGACTGCGTTATATATTCGT
ATGCTAGGAGATGTCCGAGTGAGGAGCCGAGCAGGATTTGAGACAGAAAGAAGAGGTTCCCACC
CGTACATTGACTTCCGTATTTTTCACGCTCAATCTGAAATTGAAGCATCCGTCTCCGCCAGAAA
CATCAGAAGGCTGCTCAGTTTCCAGCGGTATCTCAGATCCTCACGATTTTTTCGGGGTGCCACA
GTTTGTAGATCTTTAAATATTTTAGATGAGGATTACAATGGACAAGCCAAGTGTATGCTGGAAA
AAGTTGGAAATTGGAATTTTGATATCTTTCTGTTTGATAGACTAACAAATGGAAATAGTCTAGT
AAGCTTAACCTTTCATTTATTTAGTCTTCATGGATTGATTGAGTACTTCCATTTAGATATGGTG
AAACTCCGTCGATTTTTAGTTATGATTCAAGAAGATTACCACAGTCAAAATCCTTACCACAATG
CAGTCCATGCTGCAGATGTTACCCAGGCCATGCACTGTTACTTAAAGGAACCTAAGCTTGCCAA
TTCTGTAACTCCTTGGGATATCTTGCTGAGCTTAATTGCAGCTGCCACTCATGATCTGGATCAC
CCAGGTGTTAATCAGCCATTTCTCATTAAAACCAACCATTACTTGGCAACTTTATACAAGAATA
CCTCAGTCCTGGAGAATCACCACTGGAGATCTGCCGTGGGCTTGTTGAGAGAATCTGGTCTGTT
CTCACACTTGCCATTGGAAAGCAGGCATGAGATGGAGGCTCAGATAGGTGCTTTGATACTAGCC
ACGGACATCAGTCGCCAGAATGAGTACCTGTCATTGTTTAGATCTCACTTGGATAAAGGTGACT
TACACCTTGACGATGGCAGACATAGGCATTTGGTTCTACAGATGGCCTTGAAATGTGCTGATAT
TTGTAACCCATGTCGGAACTGGGAATTAAGCAAGCAGTGGAGTGAAAAAGTAACGGAGGAATTC
TTCCACCAAGGCGATATAGAAAAAAAGTACCATTTGGGTGTGAGTCCACTTTGTGATCGTCAGA
CTGAGTCTATTGCCAACATCCAGATTGGTTTTATGACTTACCTAGTGGAGCCTTTATTTACAGA
GTGGGCCAGGTTTTCAGACACGAGGCTGTCACAGACGATGCTCGGACACGTGGGGCTGAATAAA
GCCAGCTGGAAGGGACTACAAAGACAACAGCCTAGCAGCGAGGATGCCAGTGCTGCATTTGAGT
TGAACTCACAGCTATTAACTCAGGAAAATCGGTTATCATAACCCTGAACCAGTGGGACAACTTC
CCTCCTGCAAGATTGTGGAAATGTGAAATGGTCTTGAGTTGAAGAACTGGTTCTGACTGCTGAG
GTTTCCAAGGAAATGATGTCAGCGTTATTTATCAAGATTATCTTCTGTTGGATCATTTGAGCCC
ATTTTTTAATAGGACATGAATATATAGCAATATGCATCTGGCTTTTGTATGAAACCTTAAGTAT
GTAAAGCTCAGCAGGAGAACCAGAAAGGATTAACAAAGGAAGATGTTTTTAGGTGTGCCATGTG
CTTTCAAAGTGTGTATTCTTCAAGCCCTGAAACTTGAACTCAACCTCAGCAGCAATCTTGATGC
AACCAGTCCAATCCAACAGCGCATCTGTCCCTTCCACTACTCTGAGAAAACAGAAATGTGAAGT
GCCCAGCCTCTGCTGCCTCTGGCAAGAATCAATCAATGTTTACAAATCCAATCTGAAATATTGG
TTCTAATTGCCTCGAGCATTATTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTG
CAGCTCTTCGCAGCGTTTGCCTTTTCTTCTTTGGATGTCAATGTCATCAACGCCTCCCACTTGT
TTTGTTCTGTGCACTGGAGTCTGAGCATTTACCACAGATACCACATGAAGCTTTTCACTCCAGG
GCTGTTTGGCAATGCAGATTCCTTTTGTAACTATTAGTTTTTAACCTGGGGTGGGAGGGAAGGG
ACACCAATGTCCTAGCTGTGTTCTGACTCTGCAGTGAAGACACTGCATGTTGTTTTCACTACTG
TACACTTGACCTGCACATGCAAGGAAAAGGTGGAATGTTTAACATGCCGTATCAGCTCAGGGTA
CTTGCCAATCAGAAATAAAGTGGGATAGGGAAGTGTGTCTTTCAAATCAAGGGTACTAAAGGCC
CTTCCGCTGCAGTGCGTGAGAGGTATGTTGTGTACGGCTGTATGGGTGTGTGTTTGCGCGCATG
TTTGTGCATGTATGGCTGTGCATGTTCTGTCCATCCGTGTGGGAAAGGATTAGAATTGTAAGCT
TTTATTTATTGTTTTAGAATGTGACATAGTGAGCAGCCACACTTGGGGGAGGGGAAGGTAGGTG
AAGCTGTAAGATTGCTCCAGATGCCTTAAACTATGCACAAAGCTAAGTGACCAAACTTCTCATT
TTGATTTGAAAAGTGCATTGTTTTCTTGTCCCCCCTCCTCCACTTTGATGAAATGTTACCCTTT
GGTGGATCTTTTGATGTGAATAGATGTTTTCTAGGGTAAAATTTAAGGACTAATTTTAGACTTA
AACACTCCACTTTTGTAATGTGTTTTCAGTGGTCTTATGCATAGCAAGCACAACTGTAACTAGT
TTAAGAGAAACGGTGCTTTCTTTTAGTTAATTTGTATTGCCCTTGTTACTGTTAAAGACTGTTT
ATTATGTTTACAGTTTGTTGCAACAGCCATCTTCTTGGGAGAAAACTTGAGTGTAAAGCCATTT
GTAAAAGGCTTTGCCACACTCATTTAAACATGTGCCTGTTGCTGTTACCTTTCGATGAATAAAA
ACTGGTCTTTTCTCATTTTT

hide sequence

RefSeq Acc Id:

XM_006232188 ⟹ XP_006232250

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	103,631,655 - 103,677,916 (-)	NCBI
mRatBN7.2	2	101,714,767 - 101,761,728 (-)	NCBI
Rnor_6.0	2	104,042,124 - 104,089,666 (-)	NCBI
Rnor_5.0	2	123,764,137 - 123,856,129 (-)	NCBI

Sequence:

show sequence

TTGTCTCTAGCAGTTTTGTGTTTGTTTGCAGCCATTTGGTTAATATGGATTATAATTGTCTGGA
GGGCAGGAGCCATATTTTCAATCACTGTGATTTTAAACATTGTCACTAACATGGAGCCTGCTAC
TTAACAGAAGCTTAATAAGTATTTGCTGAATTCTTGACTAAGAGTTTACGAGAGGCTCTTCATC
AAAAGTAACTTGCTGGATGCTCTGGCAAGTGGCGAAGATGGATGAAGAGAGATAAGCTTTGTTC
TGGACAGCTCACTCGCAGTCACAAGAGTAAGATATGCACCCTGAATATTACAGAACTAGACTGT
CTTTGGACTTGAGGACAGGTATCTTTTATTATGTGAGAATACATGACCTTGTTAGTAAGGTTCA
ATGGCACAGATCATGTTTACAGCTGTTGTCATAAAATAACCGATATTGGAAGAAAGCAAAGGTT
TGAAGAAATTCAATACTCAGGGGTAAAGTGCAAAATGTTCTAATATTTTGGAGTATTATGCCTG
CAGAACTGGCCTCCATGAAAAGAATGAGGAAATTTTTAGCCTTGCCAAACATTTTTAAAAATTA
CTTTAAAATACTCTGTAGAACAAAGATTATAGACATGTTTGGGCTAGCCTGAGACCTTTTATAA
GATTATTGGACCAGGTAGGTTTTTCCTGTCTGTCTTCCAGTACAATTTCCTCTGCTCTATCCAA
GTGGTGGGGTTGTGGCATTAAGCATGTGCTGGGCAGAAAGGCTAGACAGGCCGTGCATTCCCAG
AGGAGTCAGGTGATCACTGTCTGAGGCAGCTGCTTGAGGTTCAAGGCAGTCAGTGTCCCTGTCT
TCTGCCTTGGGCGGCTGTTATTCACTGGACTCCTTAAGGAGAGAGTATGTGGTGTGCTTTTGAC
TGATCCAATGGGAATCACATTGATCTGGTGTCTGGCTTTGGTTCTGATCAAGTGGATAACCTCT
AAGAGACGTGGAGCTATTTCCTATGACAGTTCTGATCAGACTGCGTTATATATTCGTATGCTAG
GAGATGTCCGAGTGAGGAGCCGAGCAGGATTTGAGACAGAAAGAAGAGGTTCCCACCCGTACAT
TGACTTCCGTATTTTTCACGCTCAATCTGAAATTGAAGCATCCGTCTCCGCCAGAAACATCAGA
AGGCTGCTCAGTTTCCAGCGGTATCTCAGATCCTCACGATTTTTTCGGGGTGCCACAGTTTGTA
GATCTTTAAATATTTTAGATGAGGATTACAATGGACAAGCCAAGTGTATGCTGGAAAAAGTTGG
AAATTGGAATTTTGATATCTTTCTGTTTGATAGACTAACAAATGGAAATAGTCTAGTAAGCTTA
ACCTTTCATTTATTTAGTCTTCATGGATTGATTGAGTACTTCCATTTAGATATGGTGAAACTCC
GTCGATTTTTAGTTATGATTCAAGAAGATTACCACAGTCAAAATCCTTACCACAATGCAGTCCA
TGCTGCAGATGTTACCCAGGCCATGCACTGTTACTTAAAGGAACCTAAGCTTGCCAATTCTGTA
ACTCCTTGGGATATCTTGCTGAGCTTAATTGCAGCTGCCACTCATGATCTGGATCACCCAGGTG
TTAATCAGCCATTTCTCATTAAAACCAACCATTACTTGGCAACTTTATACAAGAATACCTCAGT
CCTGGAGAATCACCACTGGAGATCTGCCGTGGGCTTGTTGAGAGAATCTGGTCTGTTCTCACAC
TTGCCATTGGAAAGCAGGCATGAGATGGAGGCTCAGATAGGTGCTTTGATACTAGCCACGGACA
TCAGTCGCCAGAATGAGTACCTGTCATTGTTTAGATCTCACTTGGATAAAGGTGACTTACACCT
TGACGATGGCAGACATAGGCATTTGGTTCTACAGATGGCCTTGAAATGTGCTGATATTTGTAAC
CCATGTCGGAACTGGGAATTAAGCAAGCAGTGGAGTGAAAAAGTAACGGAGGAATTCTTCCACC
AAGGCGATATAGAAAAAAAGTACCATTTGGGTGTGAGTCCACTTTGTGATCGTCAGACTGAGTC
TATTGCCAACATCCAGATTGGTTTTATGACTTACCTAGTGGAGCCTTTATTTACAGAGTGGGCC
AGGTTTTCAGACACGAGGCTGTCACAGACGATGCTCGGACACGTGGGGCTGAATAAAGCCAGCT
GGAAGGGACTACAAAGACAACAGCCTAGCAGCGAGGATGCCAGTGCTGCATTTGAGTTGAACTC
ACAGCTATTAACTCAGGAAAATCGGTTATCATAACCCTGAACCAGTGGGACAACTTCCCTCCTG
CAAGATTGTGGAAATGTGAAATGGTCTTGAGTTGAAGAACTGGTTCTGACTGCTGAGGTTTCCA
AGGAAATGATGTCAGCGTTATTTATCAAGATTATCTTCTGTTGGATCATTTGAGCCCATTTTTT
AATAGGACATGAATATATAGCAATATGCATCTGGCTTTTGTATGAAACCTTAAGTATGTAAAGC
TCAGCAGGAGAACCAGAAAGGATTAACAAAGGAAGATGTTTTTAGGTGTGCCATGTGCTTTCAA
AGTGTGTATTCTTCAAGCCCTGAAACTTGAACTCAACCTCAGCAGCAATCTTGATGCAACCAGT
CCAATCCAACAGCGCATCTGTCCCTTCCACTACTCTGAGAAAACAGAAATGTGAAGTGCCCAGC
CTCTGCTGCCTCTGGCAAGAATCAATCAATGTTTACAAATCCAATCTGAAATATTGGTTCTAAT
TGCCTCGAGCATTATTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTCT
TCGCAGCGTTTGCCTTTTCTTCTTTGGATGTCAATGTCATCAACGCCTCCCACTTGTTTTGTTC
TGTGCACTGGAGTCTGAGCATTTACCACAGATACCACATGAAGCTTTTCACTCCAGGGCTGTTT
GGCAATGCAGATTCCTTTTGTAACTATTAGTTTTTAACCTGGGGTGGGAGGGAAGGGACACCAA
TGTCCTAGCTGTGTTCTGACTCTGCAGTGAAGACACTGCATGTTGTTTTCACTACTGTACACTT
GACCTGCACATGCAAGGAAAAGGTGGAATGTTTAACATGCCGTATCAGCTCAGGGTACTTGCCA
ATCAGAAATAAAGTGGGATAGGGAAGTGTGTCTTTCAAATCAAGGGTACTAAAGGCCCTTCCGC
TGCAGTGCGTGAGAGGTATGTTGTGTACGGCTGTATGGGTGTGTGTTTGCGCGCATGTTTGTGC
ATGTATGGCTGTGCATGTTCTGTCCATCCGTGTGGGAAAGGATTAGAATTGTAAGCTTTTATTT
ATTGTTTTAGAATGTGACATAGTGAGCAGCCACACTTGGGGGAGGGGAAGGTAGGTGAAGCTGT
AAGATTGCTCCAGATGCCTTAAACTATGCACAAAGCTAAGTGACCAAACTTCTCATTTTGATTT
GAAAAGTGCATTGTTTTCTTGTCCCCCCTCCTCCACTTTGATGAAATGTTACCCTTTGGTGGAT
CTTTTGATGTGAATAGATGTTTTCTAGGGTAAAATTTAAGGACTAATTTTAGACTTAAACACTC
CACTTTTGTAATGTGTTTTCAGTGGTCTTATGCATAGCAAGCACAACTGTAACTAGTTTAAGAG
AAACGGTGCTTTCTTTTAGTTAATTTGTATTGCCCTTGTTACTGTTAAAGACTGTTTATTATGT
TTACAGTTTGTTGCAACAGCCATCTTCTTGGGAGAAAACTTGAGTGTAAAGCCATTTGTAAAAG
GCTTTGCCACACTCATTTAAACATGTGCCTGTTGCTGTTACCTTTCGATGAATAAAAACTGGTC
TTTTCTCATTTTTTATCTTTGCACTTTACCTCACCACTCAATCCTTTGGAAATCACATGCTGAA
TTACTTAGGTGATCAGTTAGCTGTTTCCTCTTCCATTCAGTCGTGGGTAATCTTGTGGTCTAAG
CTATGTGCAGACTGTCTTCTGGAAGTGTGTGAATGAGCCTTGCTCTGCACCCTGCAGGTGTGAC
AAGGCCTGGCTCAGTTTGATCAGTCTTGCCTGCTGTGGATGGTTCTTCATAGCATTTGTTGGGA
ATTGCCTAAGAAATCACACCCTTGAAGGGGATAAAAAAAATACCAGTCAGTTGTGTTTATATTC
TTGGCCTTTTTAAAGCAATGTAAGAAATAGCCACTTAATTCTTTTTTGGGGACAGGGTCCTAGG
CTCAGATAGCCTGGCAACAATATAGACAGGCTGGCCTCAACTCACAGATACCTCCTTGCTTTTG
GGTATTAGTATTAAAGGTGTGTGCCACCATCCCCAATTAAGAGTGGCCTTTCTACCCTCCCAGA
CAGACCTAATCCATTAGAAGGGATACAGTTCAGATTTTAAGATCAGGGAAAAAAAAAAAATCAG
TGTTGGCAAACCCATTTGAATGATTTCCCAATTTTCTACAAAAGCTAAAACTTTGGTAATTCTA
ATATATCCAAAATATTTTTATTTTAGTATACGGTAATTTTTAAAGATACATTACCTTTTTTTTA
AAGTGGGTTGCTAAGTCTCTGAAATCCAGTGTGTGTTTTAAAATTACAGCACATCTCAATTTAG
ACGAGCCTCATTACAAGTGGCCCATGCCCATATTCCCTCCTATTAGACAGCATGAGTACAGGAT
AATAGTCATTACCCAAAGACAGCCACTGGCCTCTCCTAAAGTGACAACATGTTGGCATATTTGA
CTTGTCTCGGGTCTGATGAAATTTCCTGCAAGCTAATATCACCTTAAACAAGTTCACACTAACT
GATACTGCAAAGAACAGTCTTGGTATTTTAATTTGCAATGAGAAACATACTTACCAATCATTTT
CTCTCTCTTTAGGCAAATCCCCTTCAGAAGCCAAATTAGGGTCAGCTGGTTTACTCAGCAGGAA
TTTTGAACAAGGGATGCAAGTTTCCTAAAGTATCCATCTCCCTGTGGGGATACCGATATCATTC
TTAGCTGTGGACTGGGTACCCCCGCCCCTGGATGCTAGAGGTTCTAGGACACTAGTTGTTTCTC
CACATTAGCTTGATTGATTGGCAACTCCATTAGATCTGTTACTTCCTCCAGCCCTTCTTCAGTT
GAGTTTGCCTGGGCAGGCACACTGCCTCTGGTTGTTTCCTTCTGCTCTGATTATACTTGTCTTC
AAGTTTAATAACACGGTTTAGCTTTTCTGTTTCAGCTTCTCAAAGGGTCCCCTTGGTGGTGCTC
CCAAATCCATCAATTTTGTTTTCTATAGCTGTGTGGGAATTACCTGCAGCCCCTGCTTCTTCCA
CCTATTTTCCTTGAACAATTGGTTTTTCTAGAAGAATTTAAGGAAACATTTGGGTCTCATTTTT
TAAAAACAAATTCAGGGTAGTACACAAAATTCATGGAATTTCAAGATATACTGATACTTCAAGG
AATTTCTGAGCATGTAACCACCATTTGGGAGTCTGGACACACTGCTGAAGGGGAGTTGGGGGTT
GGTAAGGGAATCCCTGCCTTAGAGGTGAGAAGAAAGTTCCACAAGTCCTATCGTAACAACAAAT
CTGGTCATTAACATTGTATCCTAAACATAACAGTTTGCAATGGGCTTCTTTGTATTAAAAAAAA
GCAAACATGGGAAAAAAAAATATCCTGGACCTGAGGTATAAGTTAGAGGTGCTAGTAATTCCTT
CACAGCTCTGAAAATGGTATTTTTCACAAAGCTTTTGTGATGTTTGTTTCCTATTTAAGACTTA
AAAATTGCCACAAGCTTATGTCTTCACGTCAGTAATTGCTGGTTGAGACCACTAACTAATGTAA
TTCATACTGCTTTTAAAGAGATGTGCAAACTAGTTGCCACACCTTTGACATGTTTTTGAAACAT
AACTTTGAAACTACACACATTCCCTACTAACAAAACTGCATAGGATCGAGAGGATCCCCAAGAG
TCTTCAGGAGAGAGAACCACCACTGTGGGGCAACGTGAACTGACAGAAACAAAAGGTCTCTTAT
GTTCTTCAGTGTGCAAGGAATAGGGCAGATGTAAATTCGGCCATCAGTAAACAAATTACTGTGG
AGTTCCTATGTACCCTTTAGCTGTCACGTTATTGTTAAGAAATTTACTCAAGTGTTTCAGAAAT
GCTGAAGTTGTATAGTAAATAATGTTTCCTGATGTATTCACTTGGTGTTCAATTTTTAGAGAAC
ATTAAAAATTACAAGCCAGGGTCTCTGTTCAAATTGTCTTGGTGAAGGAAAAATGTACAAAGTG
CTTGTGATTAGTTTTCAGAACTGACTAGGAGGGGTAATGCTGGGATAATGTTTGAGAGACTAGT
TTAATAAGGAAACTAATACCATTTGCCTAAGTCAATAGTCATTCGAATTTGATTATACAGTTTC
AAGTATTAAAAATGATACTTTGAGTATCAAAATTTTAAACCTTTGTGTCTAAGTTTTCTAAGTT
ATCCTGGAATCCATCTTTAGAATCTGGTAGGATAGAAGGGGAAAGACAAACTCTGTTATTTTCA
ATATTTAGCTTCTTGTTGGCTGTTAACTTAAAAATTGAAACCTGTTGACTTAGTCATTTGTGGC
TTTCAGCTTGTACTTTAAGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TAGCAAATCTGAAGTATTCATTGTTTGGACATGTCTTGTAAAAAATTTCAGGAAACTGTAATAG
TATCAAAGTTTTATATCTTTCTTATCTACAATTTGTTTTTAAAAAATATAAAGTTTTCAAGGAA
ACATCAAAGTCTACCTGTCAGCTTACTTCAGGTGCTGTAGCACAAGACTCAAAGTCTGACAAGG
TGCCAGGTTGGCTGGGTTCCAGGAGGGGCTTCCTTCCCGGTTTGCAGACTTGCTAATTTCTAGT
TTATCCTCACATGGCCAATAGGAGAAAGAGCTAATTTTTTCACTTAGTGTTCTTACTAATCCTA
TCATGGGGTCTCCATGATTGGACATAATCACCACCCAAAGGACCTACTCCTCTAATGATAGGGC
CTTGTATGAGTAGAGCATTACACAAACGTGCATTTATTAACTGCTGGAAGTTCCTAAGTGTAGG
GATACAGCTCAGCAGGAGAGGTCGTCTCTGGGCTCCATCACACAAAGTTGAACATTAACAGAAA
GCTGGGTTTTCCATTTAAGAATCATCTTAAGAATAGGAAGGAGCTAAGTTCCCTAGGGTACACA
GGTGATTGGGGCTCAGTACAGAGGATTTGTGTGTCACTCTGGAGGCCAGTTTTACAAAGCTGAA
CTTCAGAAAGCATGAAGAGGAGTTCAGCCATCCTGCAGCTTCCCCTTGCTCATTTCTTGTTTTC
TTTCCTTTACCTCACATTTTCTCCTTTGGAAGCAGGAGTGTGGTTTTAGGAAGTATTGTGTCCA
CAGTTTGGCAGACATGGTTTTAAAGCCTTCACCAAGGTACCAAATCTTTTGAGTGGCTTTCTGA
CTTCTAAAATATTTACCAAATAAAGACAAATGCATAGTAAGAGCTAACTGAA

hide sequence

RefSeq Acc Id:

XM_008760880 ⟹ XP_008759102

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	103,631,655 - 103,672,092 (-)	NCBI
mRatBN7.2	2	101,714,767 - 101,755,948 (-)	NCBI
Rnor_6.0	2	104,042,124 - 104,080,607 (-)	NCBI

Sequence:

show sequence

AAAAAAAAGAATGGAATGGAATGGAAATAAGCCAGTGTAAAGGAGAAAAAGACCACACTGGTGA
GAAGCATTAATGCTCAGAGATTATAATTCAGTGGTACTCATGAATTCCATGTCCTAATAGTGCA
TATCCAATTTTTTATAAATGTCTTGGTTTTAACAGTGTGCTAACATGTGTATCCAGAAGTTAAA
AATTGGAAAAGAAACACAGATAATACTTATCTGACTCTCACATTTTCTGAAAGTGAAGTCATGA
CTCAAAGTCCAAATTTTTGAACTAAAATTTTGTTCCCTAGAACAAAAAATTGATTTGATGAATT
AATTTCTTTCAAATAAAACTATCCGCTCCAGTAAACAACTCAAAAGGAAAAGTAACTTGCTGGC
AAACAATAAACTGATTTGGTCTGAAGGACCCATACTGTGGAAGGAGAGAACAAACGCCCACATG
TTATTTTCTGGCTTCCCCACATGCATTGTGGCACATGTATCCCTGTCATTTATAGAGAAGATAA
ATTATATTAAAATAAATTTTAATTGCATAGTTTTGGGGAGGTATTTAATCCCATGTAAAATCTA
CACAAAACTGGAAGCATCAGACCTGGACCTATGTTGCTTGAATACGTGTGACCTAAGGAGTTCA
TTCATTCCTCAGAAAAGCAGGACCGTGAATCTTGAAATGTGGGTGACCATATTCCCACAGTCAC
TATGGCACTATCTCACTAATTACCCCTTCAGCAATACTCTTACTCATTTCAACCTTTGCATGAC
TGAGACAGACCTCCTGTGTCTACCTGTTCTGTAAATGCTACTTTCAAATCCTTTGCCTCTCTGA
TACCTCCTACTGATGTATACGTTCACTTAAGAACAAAATATACCTTCAACAGTTTAATATCAAA
TATTCTATTTTCTGGCCGCCATACTGTCTTTTAAATTTATATTATTATTCACTTCATCATTTAC
TTTGTTATTTTAGGATTTACAGTAACACAAGTGATAGAAACAAAGGAATAAACTCACCATTTGA
CCTACAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAATAACAAGGACAACCTTTACACGGTGC
ACAAAAGCATTATGCCTACAATGAGGAGTCCAAGAATACATGATCATGGTAGTCCTCACTCTGT
GCTCAGGAGATGTCCGAGTGAGGAGCCGAGCAGGATTTGAGACAGAAAGAAGAGGTTCCCACCC
GTACATTGACTTCCGTATTTTTCACGCTCAATCTGAAATTGAAGCATCCGTCTCCGCCAGAAAC
ATCAGAAGGCTGCTCAGTTTCCAGCGGTATCTCAGATCCTCACGATTTTTTCGGGGTGCCACAG
TTTGTAGATCTTTAAATATTTTAGATGAGGATTACAATGGACAAGCCAAGTGTATGCTGGAAAA
AGTTGGAAATTGGAATTTTGATATCTTTCTGTTTGATAGACTAACAAATGGAAATAGTCTAGTA
AGCTTAACCTTTCATTTATTTAGTCTTCATGGATTGATTGAGTACTTCCATTTAGATATGGTGA
AACTCCGTCGATTTTTAGTTATGATTCAAGAAGATTACCACAGTCAAAATCCTTACCACAATGC
AGTCCATGCTGCAGATGTTACCCAGGCCATGCACTGTTACTTAAAGGAACCTAAGCTTGCCAAT
TCTGTAACTCCTTGGGATATCTTGCTGAGCTTAATTGCAGCTGCCACTCATGATCTGGATCACC
CAGGTGTTAATCAGCCATTTCTCATTAAAACCAACCATTACTTGGCAACTTTATACAAGAATAC
CTCAGTCCTGGAGAATCACCACTGGAGATCTGCCGTGGGCTTGTTGAGAGAATCTGGTCTGTTC
TCACACTTGCCATTGGAAAGCAGGCATGAGATGGAGGCTCAGATAGGTGCTTTGATACTAGCCA
CGGACATCAGTCGCCAGAATGAGTACCTGTCATTGTTTAGATCTCACTTGGATAAAGGTGACTT
ACACCTTGACGATGGCAGACATAGGCATTTGGTTCTACAGATGGCCTTGAAATGTGCTGATATT
TGTAACCCATGTCGGAACTGGGAATTAAGCAAGCAGTGGAGTGAAAAAGTAACGGAGGAATTCT
TCCACCAAGGCGATATAGAAAAAAAGTACCATTTGGGTGTGAGTCCACTTTGTGATCGTCAGAC
TGAGTCTATTGCCAACATCCAGATTGGTTTTATGACTTACCTAGTGGAGCCTTTATTTACAGAG
TGGGCCAGGTTTTCAGACACGAGGCTGTCACAGACGATGCTCGGACACGTGGGGCTGAATAAAG
CCAGCTGGAAGGGACTACAAAGACAACAGCCTAGCAGCGAGGATGCCAGTGCTGCATTTGAGTT
GAACTCACAGCTATTAACTCAGGAAAATCGGTTATCATAACCCTGAACCAGTGGGACAACTTCC
CTCCTGCAAGATTGTGGAAATGTGAAATGGTCTTGAGTTGAAGAACTGGTTCTGACTGCTGAGG
TTTCCAAGGAAATGATGTCAGCGTTATTTATCAAGATTATCTTCTGTTGGATCATTTGAGCCCA
TTTTTTAATAGGACATGAATATATAGCAATATGCATCTGGCTTTTGTATGAAACCTTAAGTATG
TAAAGCTCAGCAGGAGAACCAGAAAGGATTAACAAAGGAAGATGTTTTTAGGTGTGCCATGTGC
TTTCAAAGTGTGTATTCTTCAAGCCCTGAAACTTGAACTCAACCTCAGCAGCAATCTTGATGCA
ACCAGTCCAATCCAACAGCGCATCTGTCCCTTCCACTACTCTGAGAAAACAGAAATGTGAAGTG
CCCAGCCTCTGCTGCCTCTGGCAAGAATCAATCAATGTTTACAAATCCAATCTGAAATATTGGT
TCTAATTGCCTCGAGCATTATTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGC
AGCTCTTCGCAGCGTTTGCCTTTTCTTCTTTGGATGTCAATGTCATCAACGCCTCCCACTTGTT
TTGTTCTGTGCACTGGAGTCTGAGCATTTACCACAGATACCACATGAAGCTTTTCACTCCAGGG
CTGTTTGGCAATGCAGATTCCTTTTGTAACTATTAGTTTTTAACCTGGGGTGGGAGGGAAGGGA
CACCAATGTCCTAGCTGTGTTCTGACTCTGCAGTGAAGACACTGCATGTTGTTTTCACTACTGT
ACACTTGACCTGCACATGCAAGGAAAAGGTGGAATGTTTAACATGCCGTATCAGCTCAGGGTAC
TTGCCAATCAGAAATAAAGTGGGATAGGGAAGTGTGTCTTTCAAATCAAGGGTACTAAAGGCCC
TTCCGCTGCAGTGCGTGAGAGGTATGTTGTGTACGGCTGTATGGGTGTGTGTTTGCGCGCATGT
TTGTGCATGTATGGCTGTGCATGTTCTGTCCATCCGTGTGGGAAAGGATTAGAATTGTAAGCTT
TTATTTATTGTTTTAGAATGTGACATAGTGAGCAGCCACACTTGGGGGAGGGGAAGGTAGGTGA
AGCTGTAAGATTGCTCCAGATGCCTTAAACTATGCACAAAGCTAAGTGACCAAACTTCTCATTT
TGATTTGAAAAGTGCATTGTTTTCTTGTCCCCCCTCCTCCACTTTGATGAAATGTTACCCTTTG
GTGGATCTTTTGATGTGAATAGATGTTTTCTAGGGTAAAATTTAAGGACTAATTTTAGACTTAA
ACACTCCACTTTTGTAATGTGTTTTCAGTGGTCTTATGCATAGCAAGCACAACTGTAACTAGTT
TAAGAGAAACGGTGCTTTCTTTTAGTTAATTTGTATTGCCCTTGTTACTGTTAAAGACTGTTTA
TTATGTTTACAGTTTGTTGCAACAGCCATCTTCTTGGGAGAAAACTTGAGTGTAAAGCCATTTG
TAAAAGGCTTTGCCACACTCATTTAAACATGTGCCTGTTGCTGTTACCTTTCGATGAATAAAAA
CTGGTCTTTTCTCATTTTTTATCTTTGCACTTTACCTCACCACTCAATCCTTTGGAAATCACAT
GCTGAATTACTTAGGTGATCAGTTAGCTGTTTCCTCTTCCATTCAGTCGTGGGTAATCTTGTGG
TCTAAGCTATGTGCAGACTGTCTTCTGGAAGTGTGTGAATGAGCCTTGCTCTGCACCCTGCAGG
TGTGACAAGGCCTGGCTCAGTTTGATCAGTCTTGCCTGCTGTGGATGGTTCTTCATAGCATTTG
TTGGGAATTGCCTAAGAAATCACACCCTTGAAGGGGATAAAAAAAATACCAGTCAGTTGTGTTT
ATATTCTTGGCCTTTTTAAAGCAATGTAAGAAATAGCCACTTAATTCTTTTTTGGGGACAGGGT
CCTAGGCTCAGATAGCCTGGCAACAATATAGACAGGCTGGCCTCAACTCACAGATACCTCCTTG
CTTTTGGGTATTAGTATTAAAGGTGTGTGCCACCATCCCCAATTAAGAGTGGCCTTTCTACCCT
CCCAGACAGACCTAATCCATTAGAAGGGATACAGTTCAGATTTTAAGATCAGGGAAAAAAAAAA
AATCAGTGTTGGCAAACCCATTTGAATGATTTCCCAATTTTCTACAAAAGCTAAAACTTTGGTA
ATTCTAATATATCCAAAATATTTTTATTTTAGTATACGGTAATTTTTAAAGATACATTACCTTT
TTTTTAAAGTGGGTTGCTAAGTCTCTGAAATCCAGTGTGTGTTTTAAAATTACAGCACATCTCA
ATTTAGACGAGCCTCATTACAAGTGGCCCATGCCCATATTCCCTCCTATTAGACAGCATGAGTA
CAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCTCTCCTAAAGTGACAACATGTTGGCAT
ATTTGACTTGTCTCGGGTCTGATGAAATTTCCTGCAAGCTAATATCACCTTAAACAAGTTCACA
CTAACTGATACTGCAAAGAACAGTCTTGGTATTTTAATTTGCAATGAGAAACATACTTACCAAT
CATTTTCTCTCTCTTTAGGCAAATCCCCTTCAGAAGCCAAATTAGGGTCAGCTGGTTTACTCAG
CAGGAATTTTGAACAAGGGATGCAAGTTTCCTAAAGTATCCATCTCCCTGTGGGGATACCGATA
TCATTCTTAGCTGTGGACTGGGTACCCCCGCCCCTGGATGCTAGAGGTTCTAGGACACTAGTTG
TTTCTCCACATTAGCTTGATTGATTGGCAACTCCATTAGATCTGTTACTTCCTCCAGCCCTTCT
TCAGTTGAGTTTGCCTGGGCAGGCACACTGCCTCTGGTTGTTTCCTTCTGCTCTGATTATACTT
GTCTTCAAGTTTAATAACACGGTTTAGCTTTTCTGTTTCAGCTTCTCAAAGGGTCCCCTTGGTG
GTGCTCCCAAATCCATCAATTTTGTTTTCTATAGCTGTGTGGGAATTACCTGCAGCCCCTGCTT
CTTCCACCTATTTTCCTTGAACAATTGGTTTTTCTAGAAGAATTTAAGGAAACATTTGGGTCTC
ATTTTTTAAAAACAAATTCAGGGTAGTACACAAAATTCATGGAATTTCAAGATATACTGATACT
TCAAGGAATTTCTGAGCATGTAACCACCATTTGGGAGTCTGGACACACTGCTGAAGGGGAGTTG
GGGGTTGGTAAGGGAATCCCTGCCTTAGAGGTGAGAAGAAAGTTCCACAAGTCCTATCGTAACA
ACAAATCTGGTCATTAACATTGTATCCTAAACATAACAGTTTGCAATGGGCTTCTTTGTATTAA
AAAAAAGCAAACATGGGAAAAAAAAATATCCTGGACCTGAGGTATAAGTTAGAGGTGCTAGTAA
TTCCTTCACAGCTCTGAAAATGGTATTTTTCACAAAGCTTTTGTGATGTTTGTTTCCTATTTAA
GACTTAAAAATTGCCACAAGCTTATGTCTTCACGTCAGTAATTGCTGGTTGAGACCACTAACTA
ATGTAATTCATACTGCTTTTAAAGAGATGTGCAAACTAGTTGCCACACCTTTGACATGTTTTTG
AAACATAACTTTGAAACTACACACATTCCCTACTAACAAAACTGCATAGGATCGAGAGGATCCC
CAAGAGTCTTCAGGAGAGAGAACCACCACTGTGGGGCAACGTGAACTGACAGAAACAAAAGGTC
TCTTATGTTCTTCAGTGTGCAAGGAATAGGGCAGATGTAAATTCGGCCATCAGTAAACAAATTA
CTGTGGAGTTCCTATGTACCCTTTAGCTGTCACGTTATTGTTAAGAAATTTACTCAAGTGTTTC
AGAAATGCTGAAGTTGTATAGTAAATAATGTTTCCTGATGTATTCACTTGGTGTTCAATTTTTA
GAGAACATTAAAAATTACAAGCCAGGGTCTCTGTTCAAATTGTCTTGGTGAAGGAAAAATGTAC
AAAGTGCTTGTGATTAGTTTTCAGAACTGACTAGGAGGGGTAATGCTGGGATAATGTTTGAGAG
ACTAGTTTAATAAGGAAACTAATACCATTTGCCTAAGTCAATAGTCATTCGAATTTGATTATAC
AGTTTCAAGTATTAAAAATGATACTTTGAGTATCAAAATTTTAAACCTTTGTGTCTAAGTTTTC
TAAGTTATCCTGGAATCCATCTTTAGAATCTGGTAGGATAGAAGGGGAAAGACAAACTCTGTTA
TTTTCAATATTTAGCTTCTTGTTGGCTGTTAACTTAAAAATTGAAACCTGTTGACTTAGTCATT
TGTGGCTTTCAGCTTGTACTTTAAGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTAGCAAATCTGAAGTATTCATTGTTTGGACATGTCTTGTAAAAAATTTCAGGAAACTG
TAATAGTATCAAAGTTTTATATCTTTCTTATCTACAATTTGTTTTTAAAAAATATAAAGTTTTC
AAGGAAACATCAAAGTCTACCTGTCAGCTTACTTCAGGTGCTGTAGCACAAGACTCAAAGTCTG
ACAAGGTGCCAGGTTGGCTGGGTTCCAGGAGGGGCTTCCTTCCCGGTTTGCAGACTTGCTAATT
TCTAGTTTATCCTCACATGGCCAATAGGAGAAAGAGCTAATTTTTTCACTTAGTGTTCTTACTA
ATCCTATCATGGGGTCTCCATGATTGGACATAATCACCACCCAAAGGACCTACTCCTCTAATGA
TAGGGCCTTGTATGAGTAGAGCATTACACAAACGTGCATTTATTAACTGCTGGAAGTTCCTAAG
TGTAGGGATACAGCTCAGCAGGAGAGGTCGTCTCTGGGCTCCATCACACAAAGTTGAACATTAA
CAGAAAGCTGGGTTTTCCATTTAAGAATCATCTTAAGAATAGGAAGGAGCTAAGTTCCCTAGGG
TACACAGGTGATTGGGGCTCAGTACAGAGGATTTGTGTGTCACTCTGGAGGCCAGTTTTACAAA
GCTGAACTTCAGAAAGCATGAAGAGGAGTTCAGCCATCCTGCAGCTTCCCCTTGCTCATTTCTT
GTTTTCTTTCCTTTACCTCACATTTTCTCCTTTGGAAGCAGGAGTGTGGTTTTAGGAAGTATTG
TGTCCACAGTTTGGCAGACATGGTTTTAAAGCCTTCACCAAGGTACCAAATCTTTTGAGTGGCT
TTCTGACTTCTAAAATATTTACCAAATAAAGACAAATGCATAGTAAGAGCTAACTGAA

hide sequence

RefSeq Acc Id:

XM_039103227 ⟹ XP_038959155

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	103,631,655 - 103,665,356 (-)	NCBI
mRatBN7.2	2	101,714,767 - 101,749,328 (-)	NCBI

RefSeq Acc Id:

XM_039103228 ⟹ XP_038959156

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	103,639,505 - 103,723,057 (-)	NCBI
mRatBN7.2	2	101,723,356 - 101,806,853 (-)	NCBI

RefSeq Acc Id:

XM_063282631 ⟹ XP_063138701

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	103,631,655 - 103,665,355 (-)	NCBI

RefSeq Acc Id:

XR_005500379

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	103,636,310 - 103,723,057 (-)	NCBI
mRatBN7.2	2	101,720,160 - 101,806,853 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_112342	(Get FASTA)	NCBI Sequence Viewer
	XP_006232250	(Get FASTA)	NCBI Sequence Viewer
	XP_008759102	(Get FASTA)	NCBI Sequence Viewer
	XP_038959155	(Get FASTA)	NCBI Sequence Viewer
	XP_038959156	(Get FASTA)	NCBI Sequence Viewer
	XP_063138701	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB51234	(Get FASTA)	NCBI Sequence Viewer
	EDM01062	(Get FASTA)	NCBI Sequence Viewer
	EDM01063	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000060777
	ENSRNOP00000086827
	ENSRNOP00000111863
GenBank Protein	O08593	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_112342 ⟸ NM_031080

- UniProtKB:

O08593 (UniProtKB/Swiss-Prot), F1LM88 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEVCYQLPVLPLDRPVPQHVLSRRGAISFSSSSALFGCPHPRQLSQRRGAISYDSSDQTALYIR
MLGDVRVRSRAGFETERRGSHPYIDFRIFHAQSEIEASVSARNIRRLLSFQRYLRSSRFFRGAT
VCRSLNILDEDYNGQAKCMLEKVGNWNFDIFLFDRLTNGNSLVSLTFHLFSLHGLIEYFHLDMV
KLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDILLSLIAAATHDLDH
PGVNQPFLIKTNHYLATLYKNTSVLENHHWRSAVGLLRESGLFSHLPLESRHEMEAQIGALILA
TDISRQNEYLSLFRSHLDKGDLHLDDGRHRHLVLQMALKCADICNPCRNWELSKQWSEKVTEEF
FHQGDIEKKYHLGVSPLCDRQTESIANIQIGFMTYLVEPLFTEWARFSDTRLSQTMLGHVGLNK
ASWKGLQRQQPSSEDASAAFELNSQLLTQENRLS

hide sequence

RefSeq Acc Id:	XP_006232250 ⟸ XM_006232188
- Peptide Label:	isoform X1
- UniProtKB:	O08593 (UniProtKB/Swiss-Prot), A0A8I6A6L3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGITLIWCLALVLIKWITSKRRGAISYDSSDQTALYIRMLGDVRVRSRAGFETERRGSHPYIDF RIFHAQSEIEASVSARNIRRLLSFQRYLRSSRFFRGATVCRSLNILDEDYNGQAKCMLEKVGNW NFDIFLFDRLTNGNSLVSLTFHLFSLHGLIEYFHLDMVKLRRFLVMIQEDYHSQNPYHNAVHAA DVTQAMHCYLKEPKLANSVTPWDILLSLIAAATHDLDHPGVNQPFLIKTNHYLATLYKNTSVLE NHHWRSAVGLLRESGLFSHLPLESRHEMEAQIGALILATDISRQNEYLSLFRSHLDKGDLHLDD GRHRHLVLQMALKCADICNPCRNWELSKQWSEKVTEEFFHQGDIEKKYHLGVSPLCDRQTESIA NIQIGFMTYLVEPLFTEWARFSDTRLSQTMLGHVGLNKASWKGLQRQQPSSEDASAAFELNSQL LTQENRLS hide sequence

RefSeq Acc Id:	XP_008759102 ⟸ XM_008760880
- Peptide Label:	isoform X2
- UniProtKB:	O08593 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MIMVVLTLCSGDVRVRSRAGFETERRGSHPYIDFRIFHAQSEIEASVSARNIRRLLSFQRYLRS SRFFRGATVCRSLNILDEDYNGQAKCMLEKVGNWNFDIFLFDRLTNGNSLVSLTFHLFSLHGLI EYFHLDMVKLRRFLVMIQEDYHSQNPYHNAVHAADVTQAMHCYLKEPKLANSVTPWDILLSLIA AATHDLDHPGVNQPFLIKTNHYLATLYKNTSVLENHHWRSAVGLLRESGLFSHLPLESRHEMEA QIGALILATDISRQNEYLSLFRSHLDKGDLHLDDGRHRHLVLQMALKCADICNPCRNWELSKQW SEKVTEEFFHQGDIEKKYHLGVSPLCDRQTESIANIQIGFMTYLVEPLFTEWARFSDTRLSQTM LGHVGLNKASWKGLQRQQPSSEDASAAFELNSQLLTQENRLS hide sequence

Ensembl Acc Id:

ENSRNOP00000060777 ⟸ ENSRNOT00000067725

Ensembl Acc Id:

ENSRNOP00000069695 ⟸ ENSRNOT00000088167

RefSeq Acc Id:	XP_038959155 ⟸ XM_039103227
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038959156 ⟸ XM_039103228
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000086827 ⟸ ENSRNOT00000108651

Ensembl Acc Id:

ENSRNOP00000091687 ⟸ ENSRNOT00000094659

RefSeq Acc Id:	XP_063138701 ⟸ XM_063282631
- Peptide Label:	isoform X5

Protein Domains

PDEase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-O08593-F1-model_v2	AlphaFold	O08593	1-426	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:68391	AgrOrtholog
BioCyc Gene	G2FUF-53631	BioCyc
Ensembl Genes	ENSRNOG00000013048	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000067725	ENTREZGENE
	ENSRNOT00000108651	ENTREZGENE
	ENSRNOT00000143772	ENTREZGENE
Gene3D-CATH	1.10.1300.10	UniProtKB/Swiss-Prot
InterPro	HD/PDEase_dom	UniProtKB/Swiss-Prot
	PDEase	UniProtKB/Swiss-Prot
	PDEase_catalytic_dom	UniProtKB/Swiss-Prot
	PDEase_catalytic_dom_sf	UniProtKB/Swiss-Prot
	PDEase_CS	UniProtKB/Swiss-Prot
NCBI Gene	81744	ENTREZGENE
PANTHER	CYCLIC NUCLEOTIDE PHOSPHODIESTERASE	UniProtKB/Swiss-Prot
Pfam	PDEase_I	UniProtKB/Swiss-Prot
PhenoGen	Pde7a	PhenoGen
PRINTS	PDIESTERASE1	UniProtKB/Swiss-Prot
PROSITE	PDEASE_I_1	UniProtKB/Swiss-Prot
	PDEASE_I_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000013048	RatGTEx
SMART	HDc	UniProtKB/Swiss-Prot
Superfamily-SCOP	HD-domain/PDEase-like	UniProtKB/Swiss-Prot
TIGR	TC207327
UniProt	A0A0G2JW08_RAT	UniProtKB/TrEMBL
	A0A8I6A6L3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AGL5_RAT	UniProtKB/TrEMBL
	A6IHB4_RAT	UniProtKB/TrEMBL
	A6IHB5_RAT	UniProtKB/TrEMBL
	F1LM88	ENTREZGENE, UniProtKB/TrEMBL
	O08593	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2002-06-10	Pde7a	phosphodiesterase 7A			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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RGD Manual Annotations

Imported Annotations - KEGG (archival)