Oog1-ps2 (oogenesin 1, pseudogene 2) - Rat Genome Database

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Gene: Oog1-ps2 (oogenesin 1, pseudogene 2) Rattus norvegicus
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Symbol: Oog1-ps2
Name: oogenesin 1, pseudogene 2
RGD ID: 6502517
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC100909703; LOC685768; PRAME family member 12-like; similar to preferentially expressed antigen in melanoma
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81414,129,367 - 14,134,396 (-)NCBIGRCr8
mRatBN7.21413,825,417 - 13,830,446 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.01415,630,554 - 15,635,583 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01415,569,057 - 15,574,086 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41415,630,040 - 15,635,069 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1413,850,547 - 13,855,576 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14395787821572472Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)14395787818558812Rat
7411573Bw139Body weight QTL 1394.70.001body mass (VT:0001259)body weight gain (CMO:0000420)14140068101Rat
9589814Gluco67Glucose level QTL 674.540.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)14140068101Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14939329839411170Rat
631212Bw5Body weight QTL55.43retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)141133490630674469Rat
2302277Gluco38Glucose level QTL 385.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141133471628389666Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14395787831121464Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)14117877928Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14862139853621398Rat
70195Mcs8Mammary carcinoma susceptibility QTL 84.28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)14395787824886169Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1411334716100078267Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141415516Rat
70204Niddm20Non-insulin dependent diabetes mellitus QTL 205.10.000008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)14131893212Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14862139853621398Rat


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-16310 BioCyc
NCBI Gene LOC100909703 ENTREZGENE
PhenoGen Oog1-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Oog1-ps2  oogenesin 1, pseudogene 2  LOC100909703  PRAME family member 12-like  Symbol and Name Changed 1299863 APPROVED
2021-03-09 LOC100909703  PRAME family member 12-like  LOC685768  similar to preferentially expressed antigen in melanoma  Data merged from RGD:1590200 737654 PROVISIONAL
2012-07-05 LOC100909703  PRAME family member 12-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2012-07-05 LOC685768  similar to preferentially expressed antigen in melanoma  LOC685768  similar to preferentially expressed antigen in melanoma  Gene reactivated at release of RGSC5.0 assembly 2298974 REACTIVATED
2008-01-09 LOC685768  similar to preferentially expressed antigen in melanoma  LOC684400  similar to preferentially expressed antigen in melanoma  Data merged from RGD:1590366 1643240 APPROVED
2006-11-20 LOC685768  similar to preferentially expressed antigen in melanoma      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC684400  similar to preferentially expressed antigen in melanoma      Symbol and Name status set to provisional 70820 PROVISIONAL