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Gene: Camk1g (calcium/calmodulin-dependent protein kinase IG) Rattus norvegicus

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Symbol:

Camk1g

Name:

calcium/calmodulin-dependent protein kinase IG

RGD ID:

621800

Description:

Enables calcium/calmodulin-dependent protein kinase activity. Involved in protein phosphorylation. Predicted to be located in endomembrane system and plasma membrane. Predicted to be part of calcium- and calmodulin-dependent protein kinase complex. Predicted to be active in cytoplasm. Orthologous to human CAMK1G (calcium/calmodulin dependent protein kinase IG); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

calcium/calmodulin-dependent protein kinase I gamma; calcium/calmodulin-dependent protein kinase type 1G; caM kinase I gamma; caM kinase IG; caM-KI gamma; caMK-like CREB kinase III; caMKI gamma; caMKI-gamma; caMKIG; CLICK III

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	107,406,583 - 107,430,332 (-)	NCBI		GRCr8
mRatBN7.2	13	104,877,909 - 104,901,658 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	104,877,910 - 104,901,556 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	107,395,501 - 107,419,139 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	108,779,366 - 108,803,004 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	105,997,308 - 106,020,952 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	112,075,689 - 112,099,472 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	112,075,690 - 112,099,336 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	116,631,305 - 116,655,048 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	109,192,833 - 109,216,471 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	109,381,936 - 109,405,575 (-)	NCBI
Celera	13	104,307,254 - 104,330,886 (-)	NCBI		Celera
Cytogenetic Map	13	q27	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Camk1g	Rat	gastrointestinal stromal tumor		ISO	CAMK1G (Homo sapiens)	8554872	ClinVar Annotator: match by term: Gastrointestinal stromal tumor	ClinVar	PMID:28492532
Camk1g	Rat	parathyroid carcinoma		ISO	CAMK1G (Homo sapiens)	8554872	ClinVar Annotator: match by term: Parathyroid carcinoma	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Camk1g	Rat	amyotrophic lateral sclerosis		ISO	CAMK1G (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:23624525

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Camk1g	Rat	1,2-dimethylhydrazine	decreases expression	ISO	Camk1g (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in decreased expression of CAMK1G mRNA	CTD	PMID:22206623
Camk1g	Rat	2,2',4,4'-Tetrabromodiphenyl ether	decreases expression	EXP		6480464	2 more ...	CTD	PMID:27291303
Camk1g	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of CAMK1G mRNA	CTD	PMID:32109520
Camk1g	Rat	2,4-dinitrotoluene	affects expression	EXP		6480464	2 and 4-dinitrotoluene affects the expression of CAMK1G mRNA	CTD	PMID:21346803
Camk1g	Rat	2,6-dinitrotoluene	affects expression	EXP		6480464	2 and 6-dinitrotoluene affects the expression of CAMK1G mRNA	CTD	PMID:21346803
Camk1g	Rat	3,3',4,4',5-pentachlorobiphenyl	increases expression	EXP		6480464	3 more ...	CTD	PMID:23196670
Camk1g	Rat	3,4-methylenedioxymethamphetamine	increases expression	EXP		6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of CAMK1G mRNA	CTD	PMID:30071829
Camk1g	Rat	6-propyl-2-thiouracil	decreases expression	EXP		6480464	Propylthiouracil results in decreased expression of CAMK1G mRNA	CTD	PMID:24780913
Camk1g	Rat	6-propyl-2-thiouracil	increases expression	EXP		6480464	Propylthiouracil results in increased expression of CAMK1G mRNA	CTD	PMID:25825206
Camk1g	Rat	aflatoxin B1	increases expression	ISO	CAMK1G (Homo sapiens)	6480464	Aflatoxin B1 results in increased expression of CAMK1G mRNA	CTD	PMID:21641981
Camk1g	Rat	ammonium chloride	affects expression	EXP		6480464	Ammonium Chloride affects the expression of CAMK1G mRNA	CTD	PMID:16483693
Camk1g	Rat	atrazine	increases expression	ISO	CAMK1G (Homo sapiens)	6480464	Atrazine results in increased expression of CAMK1G mRNA	CTD	PMID:22378314
Camk1g	Rat	atrazine	decreases expression	EXP		6480464	Atrazine results in decreased expression of CAMK1G mRNA	CTD	PMID:36841081
Camk1g	Rat	atrazine	affects methylation	EXP		6480464	Atrazine affects the methylation of CAMK1G gene	CTD	PMID:28931070
Camk1g	Rat	benzo[a]pyrene	increases methylation	ISO	CAMK1G (Homo sapiens)	6480464	Benzo(a)pyrene results in increased methylation of CAMK1G 5' UTR	CTD	PMID:27901495
Camk1g	Rat	benzo[a]pyrene	increases expression	ISO	CAMK1G (Homo sapiens)	6480464	Benzo(a)pyrene results in increased expression of CAMK1G mRNA	CTD	PMID:35870112
Camk1g	Rat	benzo[a]pyrene	affects methylation	ISO	CAMK1G (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of CAMK1G promoter	CTD	PMID:27901495
Camk1g	Rat	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of CAMK1G mRNA	CTD	PMID:25181051 and PMID:34947998
Camk1g	Rat	bisphenol A	decreases expression	ISO	Camk1g (Mus musculus)	6480464	bisphenol A results in decreased expression of CAMK1G mRNA	CTD	PMID:32156529
Camk1g	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of CAMK1G mRNA	CTD	PMID:30816183
Camk1g	Rat	bisphenol A	increases methylation	ISO	Camk1g (Mus musculus)	6480464	bisphenol A results in increased methylation of CAMK1G promoter	CTD	PMID:27312807
Camk1g	Rat	C60 fullerene	increases expression	EXP		6480464	fullerene C60 results in increased expression of CAMK1G mRNA	CTD	PMID:19167457
Camk1g	Rat	cadmium atom	multiple interactions	ISO	Camk1g (Mus musculus)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of CAMK1G mRNA	CTD	PMID:37325564
Camk1g	Rat	cadmium dichloride	multiple interactions	ISO	Camk1g (Mus musculus)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of CAMK1G mRNA	CTD	PMID:37325564
Camk1g	Rat	carbon nanotube	decreases expression	ISO	Camk1g (Mus musculus)	6480464	Nanotubes and Carbon results in decreased expression of CAMK1G mRNA	CTD	PMID:25554681
Camk1g	Rat	CGP 52608	multiple interactions	ISO	CAMK1G (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to CAMK1G gene]	CTD	PMID:28238834
Camk1g	Rat	chlorpyrifos	increases expression	ISO	Camk1g (Mus musculus)	6480464	Chlorpyrifos results in increased expression of CAMK1G mRNA	CTD	PMID:37019170
Camk1g	Rat	chromium(6+)	multiple interactions	ISO	CAMK1G (Homo sapiens)	6480464	[zinc chromate results in increased abundance of chromium hexavalent ion] which results in increased expression of CAMK1G mRNA	CTD	PMID:38479592
Camk1g	Rat	cobalt dichloride	decreases expression	ISO	CAMK1G (Homo sapiens)	6480464	cobaltous chloride results in decreased expression of CAMK1G mRNA	CTD	PMID:19376846
Camk1g	Rat	cocaine	multiple interactions	ISO	Camk1g (Mus musculus)	6480464	[Cocaine co-treated with FOS protein mutant form] results in increased expression of CAMK1G mRNA	CTD	PMID:18355967
Camk1g	Rat	copper atom	increases expression	EXP		6480464	Copper deficiency results in increased expression of CAMK1G mRNA	CTD	PMID:26033743
Camk1g	Rat	copper(0)	increases expression	EXP		6480464	Copper deficiency results in increased expression of CAMK1G mRNA	CTD	PMID:26033743
Camk1g	Rat	Cuprizon	decreases expression	EXP		6480464	Cuprizone results in decreased expression of CAMK1G mRNA	CTD	PMID:26577399 and PMID:27523638
Camk1g	Rat	dimethylarsinic acid	multiple interactions	ISO	Camk1g (Mus musculus)	6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of CAMK1G mRNA	CTD	PMID:34876320
Camk1g	Rat	ethanol	affects expression	ISO	Camk1g (Mus musculus)	6480464	Ethanol affects the expression of CAMK1G mRNA	CTD	PMID:30319688
Camk1g	Rat	fenvalerate	increases expression	EXP		6480464	fenvalerate results in increased expression of CAMK1G mRNA	CTD	PMID:30307764
Camk1g	Rat	GW 4064	increases expression	ISO	Camk1g (Mus musculus)	6480464	GW 4064 results in increased expression of CAMK1G mRNA	CTD	PMID:26655953
Camk1g	Rat	lipopolysaccharide	increases expression	ISO	CAMK1G (Homo sapiens)	6480464	Lipopolysaccharides results in increased expression of CAMK1G mRNA	CTD	PMID:35811015
Camk1g	Rat	lipopolysaccharide	multiple interactions	ISO	CAMK1G (Homo sapiens)	6480464	[S-(1 and 2-dichlorovinyl)cysteine affects the susceptibility to Lipopolysaccharides] which results in increased expression of CAMK1G mRNA	CTD	PMID:35811015
Camk1g	Rat	methoxyacetic acid	affects expression	EXP		6480464	methoxyacetic acid affects the expression of CAMK1G mRNA	CTD	PMID:20864626
Camk1g	Rat	methylarsonic acid	multiple interactions	ISO	Camk1g (Mus musculus)	6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of CAMK1G mRNA	CTD	PMID:34876320
Camk1g	Rat	permethrin	increases expression	EXP		6480464	Permethrin results in increased expression of CAMK1G mRNA alternative form	CTD	PMID:20143453
Camk1g	Rat	rotenone	decreases expression	ISO	Camk1g (Mus musculus)	6480464	Rotenone results in decreased expression of CAMK1G mRNA	CTD	PMID:23186747
Camk1g	Rat	S-(1,2-dichlorovinyl)-L-cysteine	multiple interactions	ISO	CAMK1G (Homo sapiens)	6480464	[S-(1 and 2-dichlorovinyl)cysteine affects the susceptibility to Lipopolysaccharides] which results in increased expression of CAMK1G mRNA	CTD	PMID:35811015
Camk1g	Rat	silver atom	affects expression	ISO	Camk1g (Mus musculus)	6480464	Silver affects the expression of CAMK1G mRNA	CTD	PMID:27131904
Camk1g	Rat	silver(0)	affects expression	ISO	Camk1g (Mus musculus)	6480464	Silver affects the expression of CAMK1G mRNA	CTD	PMID:27131904
Camk1g	Rat	sodium arsenate	multiple interactions	ISO	Camk1g (Mus musculus)	6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of CAMK1G mRNA	CTD	PMID:34876320
Camk1g	Rat	sodium arsenite	multiple interactions	ISO	Camk1g (Mus musculus)	6480464	[sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of CAMK1G mRNA	CTD	PMID:34876320
Camk1g	Rat	trichloroethene	decreases expression	EXP		6480464	Trichloroethylene results in decreased expression of CAMK1G mRNA	CTD	PMID:33387578
Camk1g	Rat	tunicamycin	increases expression	ISO	Camk1g (Mus musculus)	6480464	Tunicamycin results in increased expression of CAMK1G mRNA	CTD	PMID:17127020
Camk1g	Rat	valproic acid	decreases methylation	ISO	CAMK1G (Homo sapiens)	6480464	Valproic Acid results in decreased methylation of CAMK1G gene	CTD	PMID:29154799
Camk1g	Rat	valproic acid	decreases expression	EXP		6480464	Valproic Acid results in decreased expression of CAMK1G mRNA	CTD	PMID:29427782
Camk1g	Rat	vinclozolin	increases methylation	EXP		6480464	vinclozolin results in increased methylation of CAMK1G gene	CTD	PMID:31682807
Camk1g	Rat	zinc atom	increases expression	ISO	CAMK1G (Homo sapiens)	6480464	Zinc deficiency results in increased expression of CAMK1G mRNA	CTD	PMID:22171008
Camk1g	Rat	zinc(0)	increases expression	ISO	CAMK1G (Homo sapiens)	6480464	Zinc deficiency results in increased expression of CAMK1G mRNA	CTD	PMID:22171008

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Camk1g	Rat	calcium-mediated signaling		NAS		1299335		RGD
Camk1g	Rat	protein phosphorylation		IDA		1299335		RGD
Camk1g	Rat	signal transduction	involved_in	IBA	MGI:1098535 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Camk1g	Rat	calcium- and calmodulin-dependent protein kinase complex	part_of	ISO	Camk1g (Mus musculus)	1624291	PMID:12637513	RGD	PMID:12637513
Camk1g	Rat	calcium- and calmodulin-dependent protein kinase complex	part_of	IEA	UniProtKB:Q91VB2 and ensembl:ENSMUSP00000016323	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Camk1g	Rat	cytoplasm	is_active_in	IBA	CGD:CAL0000193471 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Camk1g	Rat	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Camk1g	Rat	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	endomembrane system	located_in	ISO	Camk1g (Mus musculus)	1624291	PMID:12637513	RGD	PMID:12637513
Camk1g	Rat	endomembrane system	located_in	IEA	UniProtKB:Q91VB2 and ensembl:ENSMUSP00000016323	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Camk1g	Rat	Golgi apparatus	located_in	IEA	UniProtKB-KW:KW-0333	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	Golgi membrane	located_in	IEA	UniProtKB-SubCell:SL-0134	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Camk1g	Rat	membrane	located_in	IEA	UniProtKB-KW:KW-0472	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	plasma membrane	located_in	IEA	UniProtKB-KW:KW-1003	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Camk1g	Rat	plasma membrane	located_in	IEA	UniProtKB:Q91VB2 and ensembl:ENSMUSP00000016323	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Camk1g	Rat	plasma membrane	located_in	ISO	Camk1g (Mus musculus)	1624291	PMID:12637513	RGD	PMID:12637513

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Camk1g	Rat	ATP binding	enables	IEA	UniProtKB-KW:KW-0067	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	ATP binding	enables	IEA	InterPro:IPR000719 and InterPro:IPR017441	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Camk1g	Rat	calcium/calmodulin-dependent protein kinase activity		IDA		1299335		RGD
Camk1g	Rat	calcium/calmodulin-dependent protein kinase activity	enables	ISO	Camk1g (Mus musculus)	1624291	PMID:12637513	RGD	PMID:12637513
Camk1g	Rat	calcium/calmodulin-dependent protein kinase activity	enables	IEA	UniProtKB:Q91VB2 and ensembl:ENSMUSP00000016323	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Camk1g	Rat	calcium/calmodulin-dependent protein kinase activity	enables	IEA	EC:2.7.11.17	1600115	GO_REF:0000003	UniProt	GO_REF:0000003
Camk1g	Rat	calcium/calmodulin-dependent protein kinase activity	enables	IBA	MGI:2388073 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Camk1g	Rat	calmodulin binding	enables	IBA	PANTHER:PTN001218105 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Camk1g	Rat	calmodulin binding	enables	IEA	UniProtKB-KW:KW-0112	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	catalytic activity	enables	IEA	UniProtKB-KW:KW-0021	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	kinase activity	enables	IEA	UniProtKB-KW:KW-0418	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	nucleotide binding	enables	IEA	UniProtKB-KW:KW-0547	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	protein binding	enables	ISO	CAMK1G (Homo sapiens)	1624291	UniProtKB:O60333-2 more ...	RGD	PMID:32296183 and PMID:32814053
Camk1g	Rat	protein kinase activity	enables	IEA	ARBA:ARBA00027018	1600115	GO_REF:0000117	UniProt	GO_REF:0000117
Camk1g	Rat	protein kinase activity	enables	IEA	InterPro:IPR000719 and InterPro:IPR008271	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Camk1g	Rat	protein serine kinase activity	enables	IEA	RHEA:17989	1600115	GO_REF:0000116	RHEA	GO_REF:0000116
Camk1g	Rat	protein serine/threonine kinase activity	enables	IEA	UniProtKB-KW:KW-0723	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Camk1g	Rat	transferase activity	enables	IEA	UniProtKB-KW:KW-0808	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
4.	Cloning, characterization and expression of two alternatively splicing isoforms of Ca2+/calmodulin-dependent protein kinase I gamma in the rat brain.	Nishimura H, etal., J Neurochem 2003 Jun;85(5):1216-27.
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	Isolation and comparison of rat cDNAs encoding Ca2+/calmodulin-dependent protein kinase I isoforms.	Yokokura H, etal., Biochim Biophys Acta 1997 Mar 7;1338(1):8-12.

PMID:12637513	PMID:19657032

Camk1g
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	107,406,583 - 107,430,332 (-)	NCBI		GRCr8
mRatBN7.2	13	104,877,909 - 104,901,658 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	104,877,910 - 104,901,556 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	107,395,501 - 107,419,139 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	108,779,366 - 108,803,004 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	105,997,308 - 106,020,952 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	112,075,689 - 112,099,472 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	112,075,690 - 112,099,336 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	116,631,305 - 116,655,048 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	109,192,833 - 109,216,471 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	109,381,936 - 109,405,575 (-)	NCBI
Celera	13	104,307,254 - 104,330,886 (-)	NCBI		Celera
Cytogenetic Map	13	q27	NCBI

CAMK1G
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	209,583,714 - 209,613,939 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	209,583,714 - 209,613,939 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	209,757,059 - 209,787,284 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	207,823,668 - 207,853,907 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	206,145,439 - 206,175,678	NCBI
Celera	1	182,987,934 - 183,018,193 (+)	NCBI		Celera
Cytogenetic Map	1	q32.2	NCBI
HuRef	1	180,432,359 - 180,462,572 (+)	NCBI		HuRef
CHM1_1	1	211,029,406 - 211,059,690 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	208,830,506 - 208,860,706 (+)	NCBI		T2T-CHM13v2.0

Camk1g
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	193,028,654 - 193,052,636 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	193,028,654 - 193,052,606 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	193,346,346 - 193,370,355 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	193,346,346 - 193,370,298 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	195,172,540 - 195,196,476 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	195,047,079 - 195,070,954 (-)	NCBI		MGSCv36	mm8
Celera	1	200,223,602 - 200,247,543 (-)	NCBI		Celera
Cytogenetic Map	1	H6	NCBI
cM Map	1	97.74	NCBI

Camk1g
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955489	2,604,030 - 2,629,436 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955489	2,604,030 - 2,629,394 (-)	NCBI	ChiLan1.0	ChiLan1.0

CAMK1G
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	39,787,224 - 39,817,539 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	39,753,466 - 39,783,781 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	185,160,170 - 185,190,470 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	189,965,450 - 189,995,703 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	189,965,490 - 189,995,703 (+)	Ensembl	panpan1.1		panPan2

CAMK1G
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	8,240,752 - 8,271,116 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	8,240,093 - 8,271,071 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	7,818,261 - 7,848,439 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	7,941,487 - 7,971,834 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	7,941,632 - 7,971,831 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	7,871,478 - 7,901,664 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	7,968,441 - 7,998,797 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	8,029,453 - 8,059,700 (+)	NCBI		UU_Cfam_GSD_1.0

Camk1g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	66,248,597 - 66,275,643 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936557	3,489,445 - 3,515,916 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936557	3,488,883 - 3,515,819 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CAMK1G
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	133,351,528 - 133,379,705 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	133,351,523 - 133,380,454 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	146,503,422 - 146,520,739 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CAMK1G
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	19,847,618 - 19,879,376 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	19,848,690 - 19,877,875 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	20,447,583 - 20,477,912 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Camk1g
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624807	2,379,097 - 2,401,205 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624807	2,379,175 - 2,402,263 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Camk1g
108 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	537
Count of miRNA genes:	221
Interacting mature miRNAs:	269
Transcripts:	ENSRNOT00000009158, ENSRNOT00000044161
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7387280	Uae43	Urinary albumin excretion QTL 43	5.69	0.4174	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	66451204	106807694	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	13	65103704	106807694	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	13	65103704	106807694	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	61825626	106807694	Rat
4889606	Gluco63	Glucose level QTL 63	2.86	0.003	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	80753256	106807694	Rat

D13Got102

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	104,889,451 - 104,889,683 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	112,087,232 - 112,087,463	NCBI	Rnor6.0
Rnor_5.0	13	116,642,848 - 116,643,079	UniSTS	Rnor5.0
RGSC_v3.4	13	109,204,366 - 109,204,598	RGD	RGSC3.4
RGSC_v3.4	13	109,204,367 - 109,204,598	UniSTS	RGSC3.4
RGSC_v3.1	13	109,393,471 - 109,393,702	RGD
Celera	13	104,318,788 - 104,319,013	UniSTS
RH 3.4 Map	13	776.2	UniSTS
RH 3.4 Map	13	776.2	RGD
RH 2.0 Map	13	776.1	RGD
Cytogenetic Map	13	q27	UniSTS

GDB:371676

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	104,901,308 - 104,901,822 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	112,099,089 - 112,099,602	NCBI	Rnor6.0
Rnor_5.0	13	116,654,705 - 116,655,218	UniSTS	Rnor5.0
RGSC_v3.4	13	109,216,224 - 109,216,737	UniSTS	RGSC3.4
Celera	13	104,330,639 - 104,331,152	UniSTS
Cytogenetic Map	13	q27	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	5	41	110	57	59	29	11	29	6	152	65	93	44	60	30


RefSeq Transcripts	NM_001429714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_182842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063271992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB101231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB101232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC126166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D86557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009158 ⟹ ENSRNOP00000009158

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	104,877,910 - 104,901,556 (-)	Ensembl
Rnor_6.0 Ensembl	13	112,075,690 - 112,099,336 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000044161 ⟹ ENSRNOP00000041124

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	104,877,910 - 104,901,556 (-)	Ensembl
Rnor_6.0 Ensembl	13	112,075,690 - 112,099,336 (-)	Ensembl

RefSeq Acc Id:

NM_182842 ⟹ NP_878262

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	107,406,592 - 107,430,230 (-)	NCBI
mRatBN7.2	13	104,877,918 - 104,901,556 (-)	NCBI
Rnor_6.0	13	112,075,698 - 112,099,336 (-)	NCBI
Rnor_5.0	13	116,631,305 - 116,655,048 (-)	NCBI
RGSC_v3.4	13	109,192,833 - 109,216,471 (-)	RGD
Celera	13	104,307,254 - 104,330,886 (-)	RGD

Sequence:

show sequence

GGCTCGCTGGCCAAGATCACAGACTGGAGCACCTTTCTTGTGAGCCCCTGGCTTCCCAGGCAGCTTCAACTCTGGAGGACATGGGGCGAAAGGAGGAGGAGGACTGTAGCTCCTGGAAGAAACAGACC
ACCAACATCAGGAAAACCTTCATCTTCATGGAAGTGCTCGGATCAGGAGCGTTCTCAGAGGTGTTCCTGGTGAAGCAAAGAGTGACTGGGAAACTCTTTGCTCTGAAGTGCATCAAGAAGTCACCAGC
CTTCCGGGACAGTAGCCTAGAGAATGAGATTGCTGTGTTGAAAAGGATCAAGCATGAAAACATTGTGACCCTGGAGGATATCTATGAGAGCACCACCCACTACTACCTGGTCATGCAGCTTGTTTCTG
GAGGTGAGCTTTTTGACCGAATCCTAGAGCGTGGTGTCTACACAGAAAAGGATGCCAGTCTGGTCATCCAGCAGGTCTTGTCTGCCGTGAAATACCTTCATGAGAATGGCATCGTTCACAGAGATCTA
AAGCCTGAAAACCTGCTGTACCTCACCCCTGAGGAGAACTCCAAGATAATGATCACTGATTTTGGCCTATCCAAGATGGAGCAGAATGGAGTCATGTCCACAGCTTGTGGGACCCCAGGCTATGTGGC
TCCAGAAGTGCTGGCCCAGAAGCCCTACAGTAAGGCTGTGGACTGCTGGTCCATTGGTGTCATCACATACATACTGCTGTGTGGGTATCCCCCTTTCTATGAAGAAACAGAATCAAAGCTTTTTGAGA
AGATCAAAGAGGGTTACTACGAGTTTGAGTCTCCATTCTGGGATGACATTTCTGAGTCAGCCAAGGACTTTATTTGCCATCTGCTTGAGAAGGACCCAAATGAACGATACACCTGCGAGAAAGCCCTC
AGACACCCTTGGATTGACGGGAACACAGCCCTGCACCGGGACATCTACCCATCTGTCAGCCTCCAGATTCAGAAGAACTTTGCCAAGAGCAAGTGGAGGCAAGCCTTCAATGCGGCCGCCGTGGTGCA
CCACATGAGGAAACTACACATGAACCTGCACAGCCCCAGTGTCCGCCAAGAAGTGGAGAACAGGCCACCTGTGTCCCCTGCTCCCGAAGTCTCCAGACCAGGCTCCCATGACAGCTCCATCACAGAGG
CTCCCATCCTGGACCCAAGCACACCCCTTCCTGCACTGACCCGACTTCCCTGCTCGCATAGCTCTCGGCCTTCAGCTCCTGGTGGCCGCTCACTCAACTGCCTGGTCAACGGTTCTCTGCGCATCAGC
AGTAGCCTAGTGCCCATGCAACAGGGTCCCCTAGCCACGGGGCCCTGCGGCTGCTGCTCCAGCTGTCTAAATATAGGGAACAAGGGAAAGTCTTCCTATTGCTCTGAGCCTACCCTCTTCAGAAAAGC
CAACAAAAAACAGAACTTCAAGTCAGAGGTCATGGTACCAGTGAAAGCAGGTGGCAGCACCCACTGCCGGGCTGGGCAGACTGGGGTGTGTCTCATAATGTGATCCCAGGAGCCCGTGTGGTTTTTCA
GGAGACACGTCTAGCTCTTCTCTGCCTCTCTAAGCTGGCGTCTGCTCTGAGGAAAGGGAGCAGCAAAGCAGGGATAGCCGAAGCGGCTGGTCTGAGGCAGTAGGGGTGTTGCTGCCTGGGCAGACACT
CGCAGGAAGTCCAGAGGAGCTCCAATCCTGGACGTTCTCTGAGGCCACAAGCAGGATGTGTGGTCTGCCTCCAGCATCCCAGCCTCCAGGTCTCCAGACCTGCCCATTCCCTTCCCCACATCCTATGT
GCAGTGGCTCTGTGCAGTGTCCATAGATAGTGCTCATCTGGGTCCGTATTGTTTGTTGTGAAAAGCTTTATGGGCTGGCCAGGCTGTGCCACTTTCTTCAAGCAAAGCCATATGGAGTCTAACTCAGA
CTCCCTGCTCTGCATACTCACTCCGGCCTCTCTGGCCTCATGGCCAGATTGAACCCGTTATCATAGTACCTGCCTATCCGCATGAATGCCAGCCTGCTTCAGGGGCCTGGGAGCACTCACAGCTCTAG
TCCTCCCCTCCAGGATTAGCTTCCCACTGCACTGAGACCCAGGCCACTTCAAAGCTCTCCCTGCCTCCGCCTAACAGCAGTGCCCCCATTCTCCATGGTGGAACGAGAAAGCTGAGACTATGGACTGT
GAGCCTTCTCTCCCAGCCACACACCTCACATATCCCTAACTAAGGATTCGGGGACTATTTCCATGTCGGCCAGGTCTCCTCTGGCTCCTTCCATTCCCCTGAAGGTCAGGTGCATTGTTCTGTCTCTC
TGTGTTCTTACCCTCATACCCTCAAGCTTCGTGCTGTGTTGTGCTCAAATAAAATGGACATAT

hide sequence

RefSeq Acc Id:

XM_006250470 ⟹ XP_006250532

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	107,406,583 - 107,430,332 (-)	NCBI
mRatBN7.2	13	104,877,909 - 104,901,658 (-)	NCBI
Rnor_6.0	13	112,075,689 - 112,099,472 (-)	NCBI
Rnor_5.0	13	116,631,305 - 116,655,048 (-)	NCBI

Sequence:

show sequence

CACTCTAGCTACTTTTACTCCCCTTTAAGGCTGCCTGGTTACAGTCCTGGGAAAGAAAACCCCT
GTATTCCTCCCCTTTAATTGGGTTTATTGTTAAAGCACTGGGGCAGCTAATCCTCACAGACCTGTAGGAGCAGGCTCGCTGGCCAAGATCACAGACTGGAGCACCTTTCTTGTGAGCCCCTGGCTTCC
CAGGCAGCTTCAACTCTGGAGGACATGGGGCGAAAGGAGGAGGAGGACTGTAGCTCCTGGAAGAAACAGACCACCAACATCAGGAAAACCTTCATCTTCATGGAAGTGCTCGGATCAGGAGCGTTCTC
AGAGGTGTTCCTGGTGAAGCAAAGAGTGACTGGGAAACTCTTTGCTCTGAAGTGCATCAAGAAGTCACCAGCCTTCCGGGACAGTAGCCTAGAGAATGAGATTGCTGTGTTGAAAAGGATCAAGCATG
AAAACATTGTGACCCTGGAGGATATCTATGAGAGCACCACCCACTACTACCTGGTCATGCAGCTTGTTTCTGGAGGTGAGCTTTTTGACCGAATCCTAGAGCGTGGTGTCTACACAGAAAAGGATGCC
AGTCTGGTCATCCAGCAGGTCTTGTCTGCCGTGAAATACCTTCATGAGAATGGCATCGTTCACAGAGATCTAAAGCCTGAAAACCTGCTGTACCTCACCCCTGAGGAGAACTCCAAGATAATGATCAC
TGATTTTGGCCTATCCAAGATGGAGCAGAATGGAGTCATGTCCACAGCTTGTGGGACCCCAGGCTATGTGGCTCCAGAAGTGCTGGCCCAGAAGCCCTACAGTAAGGCTGTGGACTGCTGGTCCATTG
GTGTCATCACATACATACTGCTGTGTGGGTATCCCCCTTTCTATGAAGAAACAGAATCAAAGCTTTTTGAGAAGATCAAAGAGGGTTACTACGAGTTTGAGTCTCCATTCTGGGATGACATTTCTGAG
TCAGCCAAGGACTTTATTTGCCATCTGCTTGAGAAGGACCCAAATGAACGATACACCTGCGAGAAAGCCCTCAGACACCCTTGGATTGACGGGAACACAGCCCTGCACCGGGACATCTACCCATCTGT
CAGCCTCCAGATTCAGAAGAACTTTGCCAAGAGCAAGTGGAGGGAACTTCAAGTCAGAGGTCATGGTACCAGTGAAAGCAGGTGGCAGCACCCACTGCCGGGCTGGGCAGACTGGGGTGTGTCTCATA
ATGTGATCCCAGGAGCCCGTGTGGTTTTTCAGGAGACACGTCTAGCTCTTCTCTGCCTCTCTAAGCTGGCGTCTGCTCTGAGGAAAGGGAGCAGCAAAGCAGGGATAGCCGAAGCGGCTGGTCTGAGG
CAGTAGGGGTGTTGCTGCCTGGGCAGACACTCGCAGGAAGTCCAGAGGAGCTCCAATCCTGGACGTTCTCTGAGGCCACAAGCAGGATGTGTGGTCTGCCTCCAGCATCCCAGCCTCCAGGTCTCCAG
ACCTGCCCATTCCCTTCCCCACATCCTATGTGCAGTGGCTCTGTGCAGTGTCCATAGATAGTGCTCATCTGGGTCCGTATTGTTTGTTGTGAAAAGCTTTATGGGCTGGCCAGGCTGTGCCACTTTCT
TCAAGCAAAGCCATATGGAGTCTAACTCAGACTCCCTGCTCTGCATACTCACTCCGGCCTCTCTGGCCTCATGGCCAGATTGAACCCGTTATCATAGTACCTGCCTATCCGCATGAATGCCAGCCTGC
TTCAGGGGCCTGGGAGCACTCACAGCTCTAGTCCTCCCCTCCAGGATTAGCTTCCCACTGCACTGAGACCCAGGCCACTTCAAAGCTCTCCCTGCCTCCGCCTAACAGCAGTGCCCCCATTCTCCATG
GTGGAACGAGAAAGCTGAGACTATGGACTGTGAGCCTTCTCTCCCAGCCACACACCTCACATATCCCTAACTAAGGATTCGGGGACTATTTCCATGTCGGCCAGGTCTCCTCTGGCTCCTTCCATTCC
CCTGAAGGTCAGGTGCATTGTTCTGTCTCTCTGTGTTCTTACCCTCATACCCTCAAGCTTCGTGCTGTGTTGTGCTCAAATAAAATGGACATATTTTTCTCTA

hide sequence

RefSeq Acc Id:

XM_063271992 ⟹ XP_063128062

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	107,407,547 - 107,430,332 (-)	NCBI


Protein RefSeqs	NP_001416643	(Get FASTA)	NCBI Sequence Viewer
	NP_878262	(Get FASTA)	NCBI Sequence Viewer
	XP_006250532	(Get FASTA)	NCBI Sequence Viewer
	XP_063128062	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA19880	(Get FASTA)	NCBI Sequence Viewer
	BAC80242	(Get FASTA)	NCBI Sequence Viewer
	BAC80243	(Get FASTA)	NCBI Sequence Viewer
	EDL95037	(Get FASTA)	NCBI Sequence Viewer
	EDL95038	(Get FASTA)	NCBI Sequence Viewer
	EDL95039	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009158
	ENSRNOP00000009158.3
	ENSRNOP00000041124
	ENSRNOP00000041124.2
GenBank Protein	Q7TNJ7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_878262 ⟸ NM_182842

- UniProtKB:

O08763 (UniProtKB/Swiss-Prot), Q7TNJ6 (UniProtKB/Swiss-Prot), Q7TNJ7 (UniProtKB/Swiss-Prot), A6JH32 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGRKEEEDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRVTGKLFALKCIKKSPAFRDSSLENEIAVLKRIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVL
SAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH
LLEKDPNERYTCEKALRHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWRQAFNAAAVVHHMRKLHMNLHSPSVRQEVENRPPVSPAPEVSRPGSHDSSITEAPILDPSTPLPALTRLPCSHSSRPSAP
GGRSLNCLVNGSLRISSSLVPMQQGPLATGPCGCCSSCLNIGNKGKSSYCSEPTLFRKANKKQNFKSEVMVPVKAGGSTHCRAGQTGVCLIM

hide sequence

RefSeq Acc Id:

XP_006250532 ⟸ XM_006250470

- Peptide Label:

isoform X2

- Sequence:

show sequence

MGRKEEEDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRVTGKLFALKCIKKSPAFRDSSLENEIAVLKRIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVL
SAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICH
LLEKDPNERYTCEKALRHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWRELQVRGHGTSESRWQHPLPGWADWGVSHNVIPGARVVFQETRLALLCLSKLASALRKGSSKAGIAEAAGLRQ

hide sequence

Ensembl Acc Id:

ENSRNOP00000009158 ⟸ ENSRNOT00000009158

Ensembl Acc Id:

ENSRNOP00000041124 ⟸ ENSRNOT00000044161

RefSeq Acc Id:	XP_063128062 ⟸ XM_063271992
- Peptide Label:	isoform X1
- UniProtKB:	Q7TNJ7 (UniProtKB/Swiss-Prot), Q7TNJ6 (UniProtKB/Swiss-Prot), O08763 (UniProtKB/Swiss-Prot), A6JH32 (UniProtKB/TrEMBL)

Protein Domains

Protein kinase

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q7TNJ7-F1-model_v2	AlphaFold	Q7TNJ7	1-476	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-16783	BioCyc
Ensembl Genes	ENSRNOG00000006470	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000009158	ENTREZGENE
	ENSRNOT00000009158.7	UniProtKB/Swiss-Prot
	ENSRNOT00000044161	ENTREZGENE
	ENSRNOT00000044161.3	UniProtKB/Swiss-Prot
Gene3D-CATH	Phosphorylase Kinase, domain 1	UniProtKB/Swiss-Prot
	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot
InterPro	Kinase-like_dom_sf	UniProtKB/Swiss-Prot
	Prot_kinase_dom	UniProtKB/Swiss-Prot
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot
KEGG Report	rno:171358	UniProtKB/Swiss-Prot
NCBI Gene	171358	ENTREZGENE
PANTHER	SERINE/THREONINE-PROTEIN KINASE	UniProtKB/Swiss-Prot
Pfam	Pkinase	UniProtKB/Swiss-Prot
PhenoGen	Camk1g	PhenoGen
PROSITE	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000006470	RatGTEx
SMART	S_TKc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF56112	UniProtKB/Swiss-Prot
UniProt	A6JH31	ENTREZGENE, UniProtKB/TrEMBL
	A6JH32	ENTREZGENE, UniProtKB/TrEMBL
	A6JH33_RAT	UniProtKB/TrEMBL
	KCC1G_RAT	UniProtKB/Swiss-Prot
	O08763	ENTREZGENE
	Q7TNJ6	ENTREZGENE
	Q7TNJ7	ENTREZGENE
UniProt Secondary	O08763	UniProtKB/Swiss-Prot
	Q7TNJ6	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-10-24	Camk1g	calcium/calmodulin-dependent protein kinase IG	Camk1g	calcium/calmodulin-dependent protein kinase I gamma	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-12-14	Camk1g	calcium/calmodulin-dependent protein kinase I gamma		calcium/calmodulin-dependent protein kinase IG	Name updated	1299863	APPROVED
2002-08-07	Camk1g	calcium/calmodulin-dependent protein kinase IG			Symbol and Name status set to provisional	70820	PROVISIONAL

Note Type	Note	Reference
gene_expression	expressed in the olfactory bulb, hippocampal pyramidal cell layer of CA3, central amygdaloid nuclei, ventromedial hypothalamic nucleus and pineal gland of the brain	68749
gene_transcript	consists of two alternatively splicing isoforms termed CaMKI gamma 1 and -gamma 2	68749

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD