CAMK1G (calcium/calmodulin dependent protein kinase IG) - Rat Genome Database

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Gene: CAMK1G (calcium/calmodulin dependent protein kinase IG) Sus scrofa
Analyze
Symbol: CAMK1G
Name: calcium/calmodulin dependent protein kinase IG
RGD ID: 14269901
Description: ENCODES a protein that exhibits calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); gastrointestinal stromal tumor (ortholog); parathyroid carcinoma (ortholog); FOUND IN cytoplasm (ortholog); neuron projection (ortholog)
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: calcium/calmodulin-dependent protein kinase type 1G
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9133,351,526 - 133,379,705 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29146,503,422 - 146,520,739 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:17145712  


Genomics

Comparative Map Data
CAMK1G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9133,351,526 - 133,379,705 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29146,503,422 - 146,520,739 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CAMK1G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381209,583,714 - 209,613,939 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1209,583,714 - 209,613,939 (+)EnsemblGRCh38hg38GRCh38
GRCh371209,757,059 - 209,787,284 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361207,823,668 - 207,853,907 (+)NCBINCBI36hg18NCBI36
Build 341206,145,439 - 206,175,678NCBI
Celera1182,987,934 - 183,018,193 (+)NCBI
Cytogenetic Map1q32.2NCBI
HuRef1180,432,359 - 180,462,572 (+)NCBIHuRef
CHM1_11211,029,406 - 211,059,690 (+)NCBICHM1_1
T2T-CHM13v2.01208,830,506 - 208,860,706 (+)NCBI
Camk1g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391193,028,654 - 193,052,690 (-)NCBIGRCm39mm39
GRCm39 Ensembl1193,028,654 - 193,052,606 (-)Ensembl
GRCm381193,346,346 - 193,370,355 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1193,346,346 - 193,370,298 (-)EnsemblGRCm38mm10GRCm38
MGSCv371195,172,540 - 195,196,476 (-)NCBIGRCm37mm9NCBIm37
MGSCv361195,047,079 - 195,070,954 (-)NCBImm8
Celera1200,223,602 - 200,247,543 (-)NCBICelera
Cytogenetic Map1H6NCBI
cM Map197.74NCBI
Camk1g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.213104,877,909 - 104,901,658 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl13104,877,910 - 104,901,556 (-)Ensembl
Rnor_6.013112,075,689 - 112,099,472 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13112,075,690 - 112,099,336 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013116,631,305 - 116,655,048 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413109,192,833 - 109,216,471 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.113109,381,936 - 109,405,575 (-)NCBI
Celera13104,307,254 - 104,330,886 (-)NCBICelera
Cytogenetic Map13q27NCBI
Camk1g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554892,604,030 - 2,629,436 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554892,604,030 - 2,629,394 (-)NCBIChiLan1.0ChiLan1.0
CAMK1G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11189,965,450 - 189,995,703 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1189,965,490 - 189,995,703 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01185,160,170 - 185,190,470 (+)NCBIMhudiblu_PPA_v0panPan3
CAMK1G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.178,240,752 - 8,271,116 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl78,240,093 - 8,271,071 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha77,818,261 - 7,848,439 (+)NCBI
ROS_Cfam_1.077,941,487 - 7,971,834 (+)NCBI
ROS_Cfam_1.0 Ensembl77,941,632 - 7,971,831 (+)Ensembl
UMICH_Zoey_3.177,871,478 - 7,901,664 (+)NCBI
UNSW_CanFamBas_1.077,968,441 - 7,998,797 (+)NCBI
UU_Cfam_GSD_1.078,029,453 - 8,059,700 (+)NCBI
Camk1g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934466,248,597 - 66,275,643 (-)NCBI
SpeTri2.0NW_0049365573,488,883 - 3,515,819 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMK1G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12519,847,618 - 19,879,376 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2519,848,690 - 19,877,875 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605520,447,583 - 20,477,912 (-)NCBIVero_WHO_p1.0
Camk1g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248072,379,097 - 2,401,205 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046248072,379,175 - 2,402,263 (-)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1
Low 3 1 3 1 22 2
Below cutoff 7 1 3 2 1 1 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000017013   ⟹   ENSSSCP00000016559
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl9133,351,526 - 133,379,705 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000057678   ⟹   ENSSSCP00000050514
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl9133,351,528 - 133,379,698 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000062169   ⟹   ENSSSCP00000036929
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl9133,351,528 - 133,379,698 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000086464   ⟹   ENSSSCP00000064815
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl9133,351,527 - 133,367,704 (-)Ensembl
RefSeq Acc Id: NM_001243934   ⟹   NP_001230863
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,351,526 - 133,370,443 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102014   ⟹   XP_020957673
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102015   ⟹   XP_020957674
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102016   ⟹   XP_020957675
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102017   ⟹   XP_020957676
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102018   ⟹   XP_020957677
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021102019   ⟹   XP_020957678
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002346922
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_020957676   ⟸   XM_021102017
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_020957678   ⟸   XM_021102019
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_020957675   ⟸   XM_021102016
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_020957673   ⟸   XM_021102014
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020957677   ⟸   XM_021102018
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_020957674   ⟸   XM_021102015
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001230863   ⟸   NM_001243934
- Sequence:
RefSeq Acc Id: ENSSSCP00000036929   ⟸   ENSSSCT00000062169
RefSeq Acc Id: ENSSSCP00000064815   ⟸   ENSSSCT00000086464
RefSeq Acc Id: ENSSSCP00000016559   ⟸   ENSSSCT00000017013
RefSeq Acc Id: ENSSSCP00000050514   ⟸   ENSSSCT00000057678
Protein Domains
Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000015619 Ensembl, UniProtKB/TrEMBL
  ENSSSCG00005007761 UniProtKB/TrEMBL
  ENSSSCG00015065295 UniProtKB/TrEMBL
  ENSSSCG00025073926 UniProtKB/TrEMBL
  ENSSSCG00030070488 UniProtKB/TrEMBL
  ENSSSCG00035019362 UniProtKB/TrEMBL
  ENSSSCG00040033975 UniProtKB/TrEMBL
  ENSSSCG00045020237 UniProtKB/TrEMBL
  ENSSSCG00050065597 UniProtKB/TrEMBL
  ENSSSCG00055000481 UniProtKB/TrEMBL
  ENSSSCG00060077078 UniProtKB/TrEMBL
  ENSSSCG00065030490 UniProtKB/TrEMBL
  ENSSSCG00070008843 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000016559 UniProtKB/TrEMBL
  ENSSSCP00000036929 UniProtKB/TrEMBL
  ENSSSCP00000050514 UniProtKB/TrEMBL
  ENSSSCP00000064815 UniProtKB/TrEMBL
  ENSSSCP00005006833 UniProtKB/TrEMBL
  ENSSSCP00015035664 UniProtKB/TrEMBL
  ENSSSCP00015035763 UniProtKB/TrEMBL
  ENSSSCP00015035879 UniProtKB/TrEMBL
  ENSSSCP00025044984 UniProtKB/TrEMBL
  ENSSSCP00025045067 UniProtKB/TrEMBL
  ENSSSCP00025045118 UniProtKB/TrEMBL
  ENSSSCP00030045392 UniProtKB/TrEMBL
  ENSSSCP00030045435 UniProtKB/TrEMBL
  ENSSSCP00030045449 UniProtKB/TrEMBL
  ENSSSCP00035009456 UniProtKB/TrEMBL
  ENSSSCP00035009465 UniProtKB/TrEMBL
  ENSSSCP00040019170 UniProtKB/TrEMBL
  ENSSSCP00040019187 UniProtKB/TrEMBL
  ENSSSCP00040019193 UniProtKB/TrEMBL
  ENSSSCP00045023932 UniProtKB/TrEMBL
  ENSSSCP00045023999 UniProtKB/TrEMBL
  ENSSSCP00045024089 UniProtKB/TrEMBL
  ENSSSCP00050038367 UniProtKB/TrEMBL
  ENSSSCP00050038370 UniProtKB/TrEMBL
  ENSSSCP00050038372 UniProtKB/TrEMBL
  ENSSSCP00055000585 UniProtKB/TrEMBL
  ENSSSCP00055000597 UniProtKB/TrEMBL
  ENSSSCP00055000605 UniProtKB/TrEMBL
  ENSSSCP00060046711 UniProtKB/TrEMBL
  ENSSSCP00060046753 UniProtKB/TrEMBL
  ENSSSCP00060046777 UniProtKB/TrEMBL
  ENSSSCP00065017462 UniProtKB/TrEMBL
  ENSSSCP00065017476 UniProtKB/TrEMBL
  ENSSSCP00070014223 UniProtKB/TrEMBL
  ENSSSCP00070014232 UniProtKB/TrEMBL
  ENSSSCP00070014242 UniProtKB/TrEMBL
  ENSSSCP00070014255 UniProtKB/TrEMBL
  ENSSSCP00070014262 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000017013 UniProtKB/TrEMBL
  ENSSSCT00000057678 UniProtKB/TrEMBL
  ENSSSCT00000062169 UniProtKB/TrEMBL
  ENSSSCT00000086464 UniProtKB/TrEMBL
  ENSSSCT00005011741 UniProtKB/TrEMBL
  ENSSSCT00015087529 UniProtKB/TrEMBL
  ENSSSCT00015087742 UniProtKB/TrEMBL
  ENSSSCT00015087989 UniProtKB/TrEMBL
  ENSSSCT00025101779 UniProtKB/TrEMBL
  ENSSSCT00025101940 UniProtKB/TrEMBL
  ENSSSCT00025102029 UniProtKB/TrEMBL
  ENSSSCT00030098613 UniProtKB/TrEMBL
  ENSSSCT00030098704 UniProtKB/TrEMBL
  ENSSSCT00030098742 UniProtKB/TrEMBL
  ENSSSCT00035025061 UniProtKB/TrEMBL
  ENSSSCT00035025077 UniProtKB/TrEMBL
  ENSSSCT00040045709 UniProtKB/TrEMBL
  ENSSSCT00040045757 UniProtKB/TrEMBL
  ENSSSCT00040045771 UniProtKB/TrEMBL
  ENSSSCT00045034504 UniProtKB/TrEMBL
  ENSSSCT00045034602 UniProtKB/TrEMBL
  ENSSSCT00045034730 UniProtKB/TrEMBL
  ENSSSCT00050089350 UniProtKB/TrEMBL
  ENSSSCT00050089357 UniProtKB/TrEMBL
  ENSSSCT00050089367 UniProtKB/TrEMBL
  ENSSSCT00055000827 UniProtKB/TrEMBL
  ENSSSCT00055000845 UniProtKB/TrEMBL
  ENSSSCT00055000855 UniProtKB/TrEMBL
  ENSSSCT00060105981 UniProtKB/TrEMBL
  ENSSSCT00060106043 UniProtKB/TrEMBL
  ENSSSCT00060106075 UniProtKB/TrEMBL
  ENSSSCT00065041195 UniProtKB/TrEMBL
  ENSSSCT00065041217 UniProtKB/TrEMBL
  ENSSSCT00070017188 UniProtKB/TrEMBL
  ENSSSCT00070017198 UniProtKB/TrEMBL
  ENSSSCT00070017211 UniProtKB/TrEMBL
  ENSSSCT00070017226 UniProtKB/TrEMBL
  ENSSSCT00070017238 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
NCBI Gene CAMK1G ENTREZGENE
Pfam Pkinase UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A286ZZN1_PIG UniProtKB/TrEMBL
  A0A287B345_PIG UniProtKB/TrEMBL
  A0A4X1TG11_PIG UniProtKB/TrEMBL
  A0A4X1TGI4_PIG UniProtKB/TrEMBL
  A0A4X1THA1_PIG UniProtKB/TrEMBL
  A0A4X1THA9_PIG UniProtKB/TrEMBL
  A0A4X1THD2_PIG UniProtKB/TrEMBL
  A0A5G2QLB1_PIG UniProtKB/TrEMBL
  A0A8D0TFP8_PIG UniProtKB/TrEMBL
  A0A8D0TFT5_PIG UniProtKB/TrEMBL
  A0A8D1E906_PIG UniProtKB/TrEMBL
  A0A8D1HTK4_PIG UniProtKB/TrEMBL
  A0A8D1HYV1_PIG UniProtKB/TrEMBL
  A0A8D1KZV9_PIG UniProtKB/TrEMBL
  A0A8D1NJL1_PIG UniProtKB/TrEMBL
  A0A8D1NKP9_PIG UniProtKB/TrEMBL
  A0A8D1PBF7_PIG UniProtKB/TrEMBL
  A0A8D1PCP6_PIG UniProtKB/TrEMBL
  A0A8D1PCQ7_PIG UniProtKB/TrEMBL
  A0A8D1WXU7_PIG UniProtKB/TrEMBL
  A0A8D1WXW5_PIG UniProtKB/TrEMBL
  F1SF44_PIG UniProtKB/TrEMBL
VGNC ID VGNC:86154 ENTREZGENE