CAMK1G (calcium/calmodulin dependent protein kinase IG) - Rat Genome Database

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Gene: CAMK1G (calcium/calmodulin dependent protein kinase IG) Chlorocebus sabaeus
Analyze
Symbol: CAMK1G
Name: calcium/calmodulin dependent protein kinase IG
RGD ID: 18573852
Description: ENCODES a protein that exhibits calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (inferred); endomembrane system (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: calcium/calmodulin-dependent protein kinase type 1G
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12519,847,618 - 19,879,376 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2519,848,690 - 19,877,875 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605520,447,583 - 20,477,912 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CAMK1G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12519,847,618 - 19,879,376 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2519,848,690 - 19,877,875 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605520,447,583 - 20,477,912 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CAMK1G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381209,583,714 - 209,613,939 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1209,583,714 - 209,613,939 (+)EnsemblGRCh38hg38GRCh38
GRCh371209,757,059 - 209,787,284 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361207,823,668 - 207,853,907 (+)NCBINCBI36Build 36hg18NCBI36
Build 341206,145,439 - 206,175,678NCBI
Celera1182,987,934 - 183,018,193 (+)NCBICelera
Cytogenetic Map1q32.2NCBI
HuRef1180,432,359 - 180,462,572 (+)NCBIHuRef
CHM1_11211,029,406 - 211,059,690 (+)NCBICHM1_1
T2T-CHM13v2.01208,830,506 - 208,860,706 (+)NCBIT2T-CHM13v2.0
Camk1g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391193,028,654 - 193,052,636 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1193,028,654 - 193,052,606 (-)EnsemblGRCm39 Ensembl
GRCm381193,346,346 - 193,370,355 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1193,346,346 - 193,370,298 (-)EnsemblGRCm38mm10GRCm38
MGSCv371195,172,540 - 195,196,476 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361195,047,079 - 195,070,954 (-)NCBIMGSCv36mm8
Celera1200,223,602 - 200,247,543 (-)NCBICelera
Cytogenetic Map1H6NCBI
cM Map197.74NCBI
Camk1g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr813107,406,583 - 107,430,332 (-)NCBIGRCr8
mRatBN7.213104,877,909 - 104,901,658 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl13104,877,910 - 104,901,556 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx13107,395,501 - 107,419,139 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.013108,779,366 - 108,803,004 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.013105,997,308 - 106,020,952 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.013112,075,689 - 112,099,472 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13112,075,690 - 112,099,336 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013116,631,305 - 116,655,048 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413109,192,833 - 109,216,471 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.113109,381,936 - 109,405,575 (-)NCBI
Celera13104,307,254 - 104,330,886 (-)NCBICelera
Cytogenetic Map13q27NCBI
Camk1g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554892,604,030 - 2,629,436 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554892,604,030 - 2,629,394 (-)NCBIChiLan1.0ChiLan1.0
CAMK1G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2139,787,224 - 39,817,539 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1139,753,466 - 39,783,781 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01185,160,170 - 185,190,470 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11189,965,450 - 189,995,703 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1189,965,490 - 189,995,703 (+)Ensemblpanpan1.1panPan2
CAMK1G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.178,240,752 - 8,271,116 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl78,240,093 - 8,271,071 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha77,818,261 - 7,848,439 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.077,941,487 - 7,971,834 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl77,941,632 - 7,971,831 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.177,871,478 - 7,901,664 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.077,968,441 - 7,998,797 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.078,029,453 - 8,059,700 (+)NCBIUU_Cfam_GSD_1.0
Camk1g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934466,248,597 - 66,275,643 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365573,489,445 - 3,515,916 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365573,488,883 - 3,515,819 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMK1G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9133,351,528 - 133,379,705 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19133,351,523 - 133,380,454 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29146,503,422 - 146,520,739 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Camk1g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248072,379,097 - 2,401,205 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248072,379,175 - 2,402,263 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system hemolymphoid system nervous system
High
Medium 24
Low 17 14 33
Below cutoff 7 4 3

Sequence


Reference Sequences
RefSeq Acc Id: ENSCSAT00000013318   ⟹   ENSCSAP00000011322
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl2519,848,690 - 19,877,875 (-)Ensembl
RefSeq Acc Id: XM_007988594   ⟹   XP_007986785
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.12519,847,618 - 19,879,375 (-)NCBI
Vero_WHO_p1.0NW_02366605520,447,583 - 20,477,912 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_007986785 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000011322
  ENSCSAP00000011322.1
Reference Protein Sequences
RefSeq Acc Id: XP_007986785   ⟸   XM_007988594
- UniProtKB: A0A0D9RRT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCSAP00000011322   ⟸   ENSCSAT00000013318


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000015230 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000013318.1 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
KEGG Report csab:103230156 UniProtKB/TrEMBL
NCBI Gene CAMK1G ENTREZGENE
PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE 1G UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A0D9RRT3 ENTREZGENE, UniProtKB/TrEMBL