LOC120102750 (U2 spliceosomal RNA) - Rat Genome Database

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Gene: LOC120102750 (U2 spliceosomal RNA) Rattus norvegicus
Analyze
No known orthologs.
Symbol: LOC120102750
Name: U2 spliceosomal RNA
RGD ID: 41403052
Description:
Type: snrna
RefSeq Status: MODEL
Previously known as: U2
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84148,067,253 - 148,067,443 (+)NCBIGRCr8
mRatBN7.24146,511,607 - 146,511,797 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4146,511,607 - 146,511,797 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl4145,319,811 - 145,320,001 (+)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC120102750
1 total Variants

1 to 10 of 58 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1549827Scl46Serum cholesterol level QTL 463.5blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)4132396220177396220Rat

1 to 10 of 58 rows





RefSeq Transcripts XR_005504341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000085834
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl4146,511,607 - 146,511,797 (+)Ensembl
RefSeq Acc Id: XR_005504341
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr84148,067,253 - 148,067,443 (+)NCBI
mRatBN7.24146,511,607 - 146,511,797 (+)NCBI

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-43389 BioCyc
Ensembl Genes ENSRNOG00000052674 Ensembl
NCBI Gene LOC120102750 ENTREZGENE
PhenoGen LOC120102750 PhenoGen
RatGTEx ENSRNOG00000052674 RatGTEx
RNAcentral URS0000710D17 RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120102750  U2 spliceosomal RNA  U2  U2 spliceosomal RNA  Data merged from RGD:15007326 737654 PROVISIONAL
2021-01-27 LOC120102750  U2 spliceosomal RNA      Symbol and Name status set to provisional 70820 PROVISIONAL
2019-11-08 U2  U2 spliceosomal RNA      Symbol and Name status set to provisional 45752 PROVISIONAL