LOC120102003 (small nucleolar RNA SNORA70) - Rat Genome Database

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Gene: LOC120102003 (small nucleolar RNA SNORA70) Rattus norvegicus
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Symbol: LOC120102003
Name: small nucleolar RNA SNORA70
RGD ID: 41069797
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: SNORA70
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8344,964,702 - 44,964,837 (+)NCBIGRCr8
mRatBN7.2324,555,003 - 24,555,138 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl324,555,003 - 24,555,138 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 Ensembl325,148,522 - 25,148,657 (+)NCBIRnor6.0rn6Rnor6.0
Cytogenetic Map3q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC120102003
3 total Variants

1 to 10 of 39 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1358357Srcrtb1Stress Responsive Cort Basal QTL 16.360.002blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)3865816227494778Rat
6893355Bw101Body weight QTL 1010.40.38body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)body weight (CMO:0000012)31737470335528639Rat
10401810Kidm53Kidney mass QTL 53kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3822719447233430Rat
1298526Arunc3Aerobic running capacity QTL 32.2exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)3822719433703538Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)31500542276927699Rat
1558657Cm43Cardiac mass QTL 436.63e-08heart mass (VT:0007028)heart wet weight (CMO:0000069)31077882330356773Rat
631568Bp92Blood pressure QTL 922.20.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3139874793Rat
6893363Bw105Body weight QTL 1052.60.0036body mass (VT:0001259)body weight (CMO:0000012)31077870430357018Rat
61468Bp15Blood pressure QTL 154.4blood pressure trait (VT:0000183)pulse pressure (CMO:0000292)3133278763Rat

1 to 10 of 39 rows





RefSeq Transcripts XR_005503048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000081270
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl324,555,003 - 24,555,138 (+)Ensembl
RefSeq Acc Id: XR_005503048
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8344,964,702 - 44,964,837 (+)NCBI
mRatBN7.2324,555,003 - 24,555,138 (+)NCBI

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-49862 BioCyc
Ensembl Genes ENSRNOG00000058641 Ensembl
NCBI Gene LOC120102003 ENTREZGENE
PhenoGen LOC120102003 PhenoGen
RatGTEx ENSRNOG00000058641 RatGTEx
RNAcentral URS000072D3AB RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120102003  small nucleolar RNA SNORA70  SNORA70  Small nucleolar RNA SNORA70  Data merged from RGD:15011939 737654 PROVISIONAL
2021-01-27 LOC120102003  small nucleolar RNA SNORA70      Symbol and Name status set to provisional 70820 PROVISIONAL
2019-11-08 SNORA70  Small nucleolar RNA SNORA70      Symbol and Name status set to provisional 45752 PROVISIONAL