Symbol:
Psmc4
Name:
proteasome 26S subunit, ATPase 4
RGD ID:
18936047
Description:
ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); nucleotide binding (inferred); INVOLVED IN blastocyst development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Carpenter syndrome 2 (ortholog); congenital hypoplastic anemia (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); cytosolic proteasome complex (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
26S protease regulatory subunit 6B
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
PSMC4 (proteasome 26S subunit, ATPase 4) NCBI
Ortholog
Mus musculus (house mouse):
Psmc4 (proteasome (prosome, macropain) 26S subunit, ATPase, 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):
Psmc4 (proteasome 26S subunit, ATPase 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Psmc4 (proteasome 26S subunit, ATPase 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
PSMC4 (proteasome 26S subunit, ATPase 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
PSMC4 (proteasome 26S subunit, ATPase 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Psmc4 (proteasome 26S subunit, ATPase 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
PSMC4 (proteasome 26S subunit, ATPase 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
PSMC4 (proteasome 26S subunit, ATPase 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Latest Assembly:
HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Psmc4
PSMC4 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 19 39,971,165 - 39,981,764 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 19 39,971,165 - 39,981,764 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 19 40,477,072 - 40,487,671 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 19 45,168,913 - 45,179,193 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 19 45,168,912 - 45,179,191 NCBI Celera 19 37,275,447 - 37,285,724 (+) NCBI Celera Cytogenetic Map 19 q13.2 NCBI HuRef 19 36,913,453 - 36,924,135 (+) NCBI HuRef CHM1_1 19 40,476,958 - 40,487,716 (+) NCBI CHM1_1 T2T-CHM13v2.0 19 42,791,375 - 42,801,971 (+) NCBI T2T-CHM13v2.0
Psmc4 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 7 27,741,127 - 27,749,517 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 7 27,741,132 - 27,749,526 (-) Ensembl GRCm39 Ensembl GRCm38 7 28,041,702 - 28,050,092 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 7 28,041,707 - 28,050,101 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 7 28,826,721 - 28,835,111 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 7 27,750,477 - 27,758,803 (-) NCBI MGSCv36 mm8 Celera 7 22,608,215 - 22,616,605 (-) NCBI Celera Cytogenetic Map 7 A3 NCBI cM Map 7 16.11 NCBI
Psmc4 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 92,476,690 - 92,485,268 (-) NCBI GRCr8 mRatBN7.2 1 83,349,127 - 83,357,497 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 83,348,592 - 83,357,494 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 1 88,759,384 - 88,767,734 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 1 97,217,473 - 97,225,843 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 1 90,515,238 - 90,523,588 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 1 84,978,220 - 84,986,536 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 84,978,206 - 84,986,581 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 86,194,919 - 86,203,235 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 1 83,151,149 - 83,159,464 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 1 83,229,258 - 83,237,575 (-) NCBI Celera 1 77,748,725 - 77,757,041 (-) NCBI Celera Cytogenetic Map 1 q21 NCBI
Psmc4 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955578 1,113,445 - 1,120,370 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955578 1,113,445 - 1,120,050 (-) NCBI ChiLan1.0 ChiLan1.0
PSMC4 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 20 46,232,549 - 46,243,056 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 19 48,103,185 - 48,113,698 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 19 37,018,112 - 37,028,490 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 19 45,533,141 - 45,543,245 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 19 45,533,141 - 45,543,245 (+) Ensembl panpan1.1 panPan2
PSMC4 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 1 113,548,351 - 113,557,725 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 1 113,548,373 - 113,557,630 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 1 112,952,245 - 112,961,621 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 1 114,148,644 - 114,157,982 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 1 114,148,650 - 114,157,892 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 1 113,707,548 - 113,716,884 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 1 113,340,335 - 113,349,711 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 1 114,334,441 - 114,343,783 (-) NCBI UU_Cfam_GSD_1.0
Psmc4 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024409349 14,094,546 - 14,100,215 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936661 2,522,615 - 2,528,284 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936661 2,522,665 - 2,528,279 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
PSMC4
PSMC4 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 6 34,486,303 - 34,495,392 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 6 34,486,338 - 34,495,251 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666073 12,578,624 - 12,587,383 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSHGLT00000015939 ⟹ ENSHGLP00000015774
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla_female_1.0 Ensembl NW_004624925 119,777 - 130,723 (+) Ensembl
RefSeq Acc Id:
XM_004874168 ⟹ XP_004874225
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624925 119,837 - 127,678 (+) NCBI
RefSeq Acc Id:
XP_004874225 ⟸ XM_004874168
- UniProtKB:
G5APZ6 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSHGLP00000015774 ⟸ ENSHGLT00000015939
