Adra2c (adrenoceptor alpha 2C) - Rat Genome Database

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Gene: Adra2c (adrenoceptor alpha 2C) Heterocephalus glaber
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Symbol: Adra2c
Name: adrenoceptor alpha 2C
RGD ID: 18926774
Description: ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); alpha2-adrenergic receptor activity (ortholog); epinephrine binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); adrenergic receptor signaling pathway (ortholog); female pregnancy (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Ellis-Van Creveld syndrome (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Alpha-2C adrenergic receptor
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475524,300,347 - 24,301,693 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475524,299,985 - 24,301,824 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Adra2c
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475524,300,347 - 24,301,693 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475524,299,985 - 24,301,824 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
ADRA2C
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3843,766,385 - 3,768,526 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl43,766,348 - 3,768,526 (+)EnsemblGRCh38hg38GRCh38
GRCh3743,768,112 - 3,770,253 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3643,738,094 - 3,740,051 (+)NCBINCBI36Build 36hg18NCBI36
Build 3443,804,398 - 3,807,217NCBI
Celera43,671,112 - 3,673,097 (+)NCBICelera
Cytogenetic Map4p16.3NCBI
HuRef43,705,412 - 3,707,390 (+)NCBIHuRef
CHM1_143,766,238 - 3,768,183 (+)NCBICHM1_1
T2T-CHM13v2.043,765,283 - 3,767,445 (+)NCBIT2T-CHM13v2.0
Adra2c
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39535,435,910 - 35,439,107 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl535,435,663 - 35,439,107 (+)EnsemblGRCm39 Ensembl
GRCm38535,278,566 - 35,281,763 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl535,278,319 - 35,281,763 (+)EnsemblGRCm38mm10GRCm38
MGSCv37535,621,215 - 35,624,412 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36535,595,575 - 35,598,742 (+)NCBIMGSCv36mm8
Celera532,753,998 - 32,757,254 (+)NCBICelera
Cytogenetic Map5B2NCBI
cM Map518.09NCBI
Adra2c
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81479,695,514 - 79,697,476 (-)NCBIGRCr8
mRatBN7.21475,470,884 - 75,472,846 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1475,471,143 - 75,472,846 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1479,924,216 - 79,926,175 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01481,165,071 - 81,167,030 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01477,610,079 - 77,612,038 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01480,730,307 - 80,732,010 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1480,730,307 - 80,732,010 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01481,422,130 - 81,423,833 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41481,107,907 - 81,109,610 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11481,110,297 - 81,112,001 (-)NCBI
Celera1474,399,360 - 74,401,063 (-)NCBICelera
Cytogenetic Map14q21NCBI
ADRA2C
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v234,099,781 - 4,102,012 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan144,033,469 - 4,035,654 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v043,904,346 - 3,906,577 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.143,894,575 - 3,897,018 (+)NCBIpanpan1.1PanPan1.1panPan2
ADRA2C
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1360,608,632 - 60,648,112 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl360,646,132 - 60,647,722 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha363,296,546 - 63,298,547 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0361,121,798 - 61,123,799 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl361,122,360 - 61,123,799 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1360,615,963 - 60,617,962 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0360,821,563 - 60,823,566 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0361,177,369 - 61,179,380 (-)NCBIUU_Cfam_GSD_1.0
ADRA2C
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl82,320,226 - 2,321,608 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.182,320,125 - 2,322,162 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.282,048,614 - 2,050,639 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ADRA2C
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12744,950,928 - 44,953,245 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2744,951,457 - 44,952,827 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660511,297,830 - 1,299,978 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000029574   ⟹   ENSHGLP00000028940
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462475524,300,347 - 24,301,693 (-)Ensembl
RefSeq Acc Id: XM_004847357   ⟹   XP_004847414
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475524,299,985 - 24,301,824 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004847414 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB10163 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000028940
RefSeq Acc Id: XP_004847414   ⟸   XM_004847357
Ensembl Acc Id: ENSHGLP00000028940   ⟸   ENSHGLT00000029574


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000021364 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000029574 ENTREZGENE
NCBI Gene Adra2c ENTREZGENE
UniProt A0AAX6PAL1_HETGA UniProtKB/TrEMBL