Camk2n1 (calcium/calmodulin dependent protein kinase II inhibitor 1) - Rat Genome Database

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Gene: Camk2n1 (calcium/calmodulin dependent protein kinase II inhibitor 1) Heterocephalus glaber
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Symbol: Camk2n1
Name: calcium/calmodulin dependent protein kinase II inhibitor 1
RGD ID: 18926103
Description: ENCODES a protein that exhibits calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN long-term memory (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH 3-hydroxy-3-methylglutaryl-CoA lyase deficiency (ortholog); alcohol use disorder (ortholog); congenital disorder of glycosylation Ir (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); postsynaptic density (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: calcium/calmodulin-dependent protein kinase II inhibitor 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247645,544,484 - 5,547,683 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247645,544,589 - 5,547,811 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Camk2n1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247645,544,484 - 5,547,683 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247645,544,589 - 5,547,811 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
CAMK2N1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38120,482,391 - 20,486,210 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl120,482,391 - 20,486,210 (-)EnsemblGRCh38hg38GRCh38
GRCh37120,808,884 - 20,812,703 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36120,681,471 - 20,685,315 (-)NCBINCBI36Build 36hg18NCBI36
Celera119,133,214 - 19,137,058 (-)NCBICelera
Cytogenetic Map1p36.12NCBI
HuRef119,055,013 - 19,058,818 (-)NCBIHuRef
CHM1_1120,919,287 - 20,923,131 (-)NCBICHM1_1
T2T-CHM13v2.0120,307,345 - 20,311,164 (-)NCBIT2T-CHM13v2.0
Camk2n1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394138,182,459 - 138,187,437 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4138,181,625 - 138,187,434 (+)EnsemblGRCm39 Ensembl
GRCm384138,455,148 - 138,460,126 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4138,454,314 - 138,460,123 (+)EnsemblGRCm38mm10GRCm38
MGSCv374138,011,063 - 138,016,041 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364137,725,651 - 137,730,594 (+)NCBIMGSCv36mm8
MGSCv364136,043,940 - 136,058,301 (+)NCBIMGSCv36mm8
Celera4140,239,091 - 140,244,093 (+)NCBICelera
Cytogenetic Map4D3NCBI
cM Map470.3NCBI
Camk2n1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85155,958,116 - 155,959,897 (+)NCBIGRCr8
mRatBN7.25150,674,819 - 150,676,600 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5150,673,507 - 150,676,600 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5153,371,504 - 153,373,282 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05155,145,792 - 155,147,571 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05155,127,794 - 155,129,574 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05156,876,706 - 156,878,486 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5156,876,706 - 156,878,486 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05160,625,616 - 160,627,396 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45157,235,534 - 157,237,314 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15157,245,572 - 157,247,353 (+)NCBI
Celera5149,065,196 - 149,066,976 (+)NCBICelera
Cytogenetic Map5q36NCBI
Camk2n1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554521,043,459 - 1,046,669 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554521,044,696 - 1,046,657 (-)NCBIChiLan1.0ChiLan1.0
CAMK2N1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21206,633,219 - 206,636,276 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11205,750,123 - 205,753,105 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0119,437,761 - 19,441,573 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1120,479,559 - 20,482,600 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl120,479,562 - 20,482,600 (-)Ensemblpanpan1.1panPan2
CAMK2N1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha274,928,874 - 74,931,940 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0278,981,714 - 78,984,779 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1275,800,282 - 75,803,341 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0276,812,085 - 76,815,128 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,815,680 - 77,818,746 (+)NCBIUU_Cfam_GSD_1.0
Camk2n1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505840,638,909 - 40,641,859 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364746,461,050 - 6,466,641 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364746,463,691 - 6,466,641 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMK2N1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl678,730,206 - 78,733,740 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1678,730,204 - 78,734,232 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2672,919,019 - 72,922,690 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CAMK2N1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120112,064,718 - 112,068,505 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20112,065,581 - 112,067,256 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660334,148,834 - 4,152,590 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004850460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01044633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSHGLT00000020740   ⟹   ENSHGLP00000020538
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247645,544,484 - 5,547,683 (-)Ensembl
RefSeq Acc Id: XM_004850460   ⟹   XP_004850517
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247645,544,589 - 5,547,811 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004850517 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000020538
RefSeq Acc Id: XP_004850517   ⟸   XM_004850460
Ensembl Acc Id: ENSHGLP00000020538   ⟸   ENSHGLT00000020740


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000014681 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000020740 ENTREZGENE
NCBI Gene Camk2n1 ENTREZGENE
UniProt A0AAX6PF96_HETGA UniProtKB/TrEMBL