CAMK2N1 (calcium/calmodulin dependent protein kinase II inhibitor 1) - Rat Genome Database

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Gene: CAMK2N1 (calcium/calmodulin dependent protein kinase II inhibitor 1) Sus scrofa
Analyze
Symbol: CAMK2N1
Name: calcium/calmodulin dependent protein kinase II inhibitor 1
RGD ID: 14263732
Description: ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); positive regulation of systemic arterial blood pressure (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH 3-Hydroxy-3-Methylglutaryl-CoA Lyase Deficiency (ortholog); alcohol use disorder (ortholog); congenital disorder of glycosylation Ir (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: calcium/calmodulin-dependent protein kinase II inhibitor 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl678,730,206 - 78,733,740 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1678,730,204 - 78,734,232 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2672,919,019 - 72,922,690 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
CAMK2N1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl678,730,206 - 78,733,740 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1678,730,204 - 78,734,232 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2672,919,019 - 72,922,690 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CAMK2N1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38120,482,391 - 20,486,210 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl120,482,391 - 20,486,210 (-)EnsemblGRCh38hg38GRCh38
GRCh37120,808,884 - 20,812,703 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36120,681,471 - 20,685,315 (-)NCBINCBI36Build 36hg18NCBI36
Celera119,133,214 - 19,137,058 (-)NCBICelera
Cytogenetic Map1p36.12NCBI
HuRef119,055,013 - 19,058,818 (-)NCBIHuRef
CHM1_1120,919,287 - 20,923,131 (-)NCBICHM1_1
T2T-CHM13v2.0120,307,345 - 20,311,164 (-)NCBIT2T-CHM13v2.0
Camk2n1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394138,182,459 - 138,187,437 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4138,181,625 - 138,187,434 (+)EnsemblGRCm39 Ensembl
GRCm384138,455,148 - 138,460,126 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4138,454,314 - 138,460,123 (+)EnsemblGRCm38mm10GRCm38
MGSCv374138,011,063 - 138,016,041 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364137,725,651 - 137,730,594 (+)NCBIMGSCv36mm8
MGSCv364136,043,940 - 136,058,301 (+)NCBIMGSCv36mm8
Celera4140,239,091 - 140,244,093 (+)NCBICelera
Cytogenetic Map4D3NCBI
cM Map470.3NCBI
Camk2n1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85155,958,116 - 155,959,897 (+)NCBIGRCr8
mRatBN7.25150,674,819 - 150,676,600 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5150,673,507 - 150,676,600 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5153,371,504 - 153,373,282 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05155,145,792 - 155,147,571 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05155,127,794 - 155,129,574 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05156,876,706 - 156,878,486 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5156,876,706 - 156,878,486 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05160,625,616 - 160,627,396 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45157,235,534 - 157,237,314 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15157,245,572 - 157,247,353 (+)NCBI
Celera5149,065,196 - 149,066,976 (+)NCBICelera
Cytogenetic Map5q36NCBI
Camk2n1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554521,043,459 - 1,046,669 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554521,044,696 - 1,046,657 (-)NCBIChiLan1.0ChiLan1.0
CAMK2N1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21206,633,219 - 206,636,276 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11205,750,123 - 205,753,105 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0119,437,761 - 19,441,573 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1120,479,559 - 20,482,600 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl120,479,562 - 20,482,600 (-)Ensemblpanpan1.1panPan2
CAMK2N1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha274,928,874 - 74,931,940 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0278,981,714 - 78,984,779 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1275,800,282 - 75,803,341 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0276,812,085 - 76,815,128 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,815,680 - 77,818,746 (+)NCBIUU_Cfam_GSD_1.0
Camk2n1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505840,638,909 - 40,641,859 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364746,461,050 - 6,466,641 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364746,463,691 - 6,466,641 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMK2N1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120112,064,718 - 112,068,505 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20112,065,581 - 112,067,256 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660334,148,834 - 4,152,590 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Camk2n1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247645,544,484 - 5,547,683 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247645,544,589 - 5,547,811 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CAMK2N1
102 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 3 3 2 23
Low 7 4 3 2 2 3 1
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000032022   ⟹   ENSSSCP00000026193
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl678,730,206 - 78,733,740 (-)Ensembl
RefSeq Acc Id: XM_003127675   ⟹   XP_003127723
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1678,730,204 - 78,734,232 (-)NCBI
Sequence:
RefSeq Acc Id: XP_003127723   ⟸   XM_003127675
- UniProtKB: I3LQ15 (UniProtKB/TrEMBL),   A0A8D0MKN5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000026193   ⟸   ENSSSCT00000032022


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000024009 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015010164 UniProtKB/TrEMBL
  ENSSSCG00025018819 UniProtKB/TrEMBL
  ENSSSCG00030048431 UniProtKB/TrEMBL
  ENSSSCG00035081214 UniProtKB/TrEMBL
  ENSSSCG00040050912 UniProtKB/TrEMBL
  ENSSSCG00045015469 UniProtKB/TrEMBL
  ENSSSCG00050078968 UniProtKB/TrEMBL
  ENSSSCG00055012953 UniProtKB/TrEMBL
  ENSSSCG00065035229 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000032022 ENTREZGENE
  ENSSSCT00000032022.4 UniProtKB/TrEMBL
  ENSSSCT00015013304.1 UniProtKB/TrEMBL
  ENSSSCT00025025509.1 UniProtKB/TrEMBL
  ENSSSCT00025025525.1 UniProtKB/TrEMBL
  ENSSSCT00030067600.1 UniProtKB/TrEMBL
  ENSSSCT00030067616.1 UniProtKB/TrEMBL
  ENSSSCT00035111687.1 UniProtKB/TrEMBL
  ENSSSCT00035111689.1 UniProtKB/TrEMBL
  ENSSSCT00040068723.1 UniProtKB/TrEMBL
  ENSSSCT00040068768.1 UniProtKB/TrEMBL
  ENSSSCT00045026209.1 UniProtKB/TrEMBL
  ENSSSCT00045026233.1 UniProtKB/TrEMBL
  ENSSSCT00050109000.1 UniProtKB/TrEMBL
  ENSSSCT00050109001.1 UniProtKB/TrEMBL
  ENSSSCT00055025483.1 UniProtKB/TrEMBL
  ENSSSCT00055025516.1 UniProtKB/TrEMBL
  ENSSSCT00065047979.1 UniProtKB/TrEMBL
InterPro Camk2n UniProtKB/TrEMBL
KEGG Report ssc:100515264 UniProtKB/TrEMBL
NCBI Gene CAMK2N1 ENTREZGENE
PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE II INHIBITOR 1 UniProtKB/TrEMBL
  PTHR31007 UniProtKB/TrEMBL
Pfam CaM-KIIN UniProtKB/TrEMBL
UniProt A0A8D0MKN5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0X7N9_PIG UniProtKB/TrEMBL
  A0A8D1BUI7_PIG UniProtKB/TrEMBL
  A0A8D1F3A7_PIG UniProtKB/TrEMBL
  I3LQ15 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:96935 ENTREZGENE