Symbol:
Tfap4
Name:
transcription factor AP-4
RGD ID:
18917944
Description:
ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH epilepsy (ortholog); Idiopathic Generalized Epilepsy (ortholog); intellectual disability (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Tfap4 (Heterocephalus glaber - naked mole-rat)
TFAP4 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 16 4,257,186 - 4,273,023 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 16 4,257,186 - 4,273,075 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 16 4,307,187 - 4,323,024 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 16 4,247,188 - 4,263,002 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 16 4,247,188 - 4,262,999 NCBI Celera 16 4,514,186 - 4,529,994 (-) NCBI Celera Cytogenetic Map 16 p13.3 NCBI HuRef 16 4,274,201 - 4,289,950 (-) NCBI HuRef CHM1_1 16 4,306,776 - 4,322,587 (-) NCBI CHM1_1 T2T-CHM13v2.0 16 4,284,515 - 4,300,348 (-) NCBI T2T-CHM13v2.0
Tfap4 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 16 4,362,525 - 4,378,625 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 16 4,362,525 - 4,377,718 (-) Ensembl GRCm39 Ensembl GRCm38 16 4,544,661 - 4,560,762 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 16 4,544,661 - 4,559,854 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 16 4,544,661 - 4,559,720 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 16 4,459,889 - 4,474,948 (-) NCBI MGSCv36 mm8 Celera 16 5,172,967 - 5,188,068 (-) NCBI Celera Cytogenetic Map 16 A1 NCBI cM Map 16 2.45 NCBI
Tfap4 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 11,507,242 - 11,525,794 (+) NCBI GRCr8 mRatBN7.2 10 11,001,338 - 11,019,386 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 11,002,911 - 11,019,386 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 15,711,539 - 15,727,556 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 15,200,351 - 15,216,367 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 10,869,709 - 10,885,786 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 11,204,616 - 11,222,975 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 11,206,226 - 11,223,370 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 9,968,255 - 9,986,048 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 11,144,057 - 11,159,763 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 10 11,144,056 - 11,159,763 (+) NCBI Celera 10 9,964,931 - 9,979,711 (+) NCBI Celera Cytogenetic Map 10 q12 NCBI
Tfap4 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955442 13,160,450 - 13,175,057 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955442 13,160,467 - 13,174,288 (+) NCBI ChiLan1.0 ChiLan1.0
TFAP4 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 18 4,780,566 - 4,830,819 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 16 8,564,889 - 8,615,240 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 16 3,176,129 - 3,226,404 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 16 4,348,066 - 4,394,809 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 16 4,348,929 - 4,368,525 (-) Ensembl panpan1.1 panPan2
TFAP4 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 37,075,462 - 37,111,039 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 37,097,786 - 37,111,072 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 38,403,673 - 38,439,255 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 37,279,975 - 37,315,672 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 6 37,302,967 - 37,315,669 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 6 37,073,932 - 37,109,475 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 36,967,095 - 37,002,646 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 37,368,408 - 37,404,234 (+) NCBI UU_Cfam_GSD_1.0
Tfap4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
TFAP4 (Sus scrofa - pig)
TFAP4 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 5 3,931,288 - 3,960,039 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 5 3,932,149 - 3,954,486 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666068 26,695,606 - 26,761,798 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSHGLT00000019236 ⟹ ENSHGLP00000019046
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla_female_1.0 Ensembl NW_004624824 2,044,235 - 2,058,662 (-) Ensembl
RefSeq Acc Id:
XM_004864772 ⟹ XP_004864829
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624824 2,044,322 - 2,058,540 (-) NCBI
RefSeq Acc Id:
XM_004864773 ⟹ XP_004864830
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624824 2,044,322 - 2,105,571 (-) NCBI
RefSeq Acc Id:
XM_004864774 ⟹ XP_004864831
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624824 2,044,322 - 2,075,230 (-) NCBI
RefSeq Acc Id:
XM_021244366 ⟹ XP_021100025
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624824 2,044,322 - 2,057,373 (-) NCBI
RefSeq Acc Id:
XM_021244367 ⟹ XP_021100026
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624824 2,044,322 - 2,057,072 (-) NCBI
RefSeq Acc Id:
XP_004864830 ⟸ XM_004864773
- Peptide Label:
isoform X2
- UniProtKB:
A0AAX6RU36 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_004864831 ⟸ XM_004864774
- Peptide Label:
isoform X2
- UniProtKB:
A0AAX6RU36 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_004864829 ⟸ XM_004864772
- Peptide Label:
isoform X1
- UniProtKB:
G5C0J0 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_021100025 ⟸ XM_021244366
- Peptide Label:
isoform X2
- UniProtKB:
A0AAX6RU36 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_021100026 ⟸ XM_021244367
- Peptide Label:
isoform X2
- UniProtKB:
A0AAX6RU36 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSHGLP00000019046 ⟸ ENSHGLT00000019236