Ube2ql1 (ubiquitin conjugating enzyme E2 QL1) - Rat Genome Database

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Gene: Ube2ql1 (ubiquitin conjugating enzyme E2 QL1) Heterocephalus glaber
Analyze
Symbol: Ube2ql1
Name: ubiquitin conjugating enzyme E2 QL1 (Ensembl:ubiquitin conjugating enzyme E2 Q family like 1)
RGD ID: 18914946
Description: ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ubiquitin conjugating enzyme E2 Q family like 1; ubiquitin-conjugating enzyme E2Q-like protein 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247514,193,962 - 4,232,309 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247514,193,968 - 4,228,468 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625  


Genomics

Comparative Map Data
Ube2ql1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247514,193,962 - 4,232,309 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247514,193,968 - 4,228,468 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
UBE2QL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3856,448,859 - 6,496,723 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl56,448,859 - 6,496,723 (+)EnsemblGRCh38hg38GRCh38
GRCh3756,448,972 - 6,496,836 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3656,490,460 - 6,548,029 (+)NCBINCBI36Build 36hg18NCBI36
Celera56,476,425 - 6,520,375 (+)NCBICelera
Cytogenetic Map5p15.31NCBI
HuRef56,466,054 - 6,471,560 (+)NCBIHuRef
CHM1_156,448,829 - 6,496,771 (+)NCBICHM1_1
T2T-CHM13v2.056,379,225 - 6,427,083 (+)NCBIT2T-CHM13v2.0
Ube2ql1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391369,850,951 - 69,888,016 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1369,850,951 - 69,888,008 (-)EnsemblGRCm39 Ensembl
GRCm381369,702,832 - 69,739,897 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1369,702,832 - 69,739,889 (-)EnsemblGRCm38mm10GRCm38
MGSCv371369,841,710 - 69,878,775 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361370,170,200 - 70,206,712 (-)NCBIMGSCv36mm8
Celera1372,047,268 - 72,084,442 (-)NCBICelera
Cytogenetic Map13B3- C1NCBI
cM Map1335.55NCBI
Ube2ql1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8135,377,264 - 35,417,624 (+)NCBIGRCr8
mRatBN7.2133,548,814 - 33,589,174 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl133,548,814 - 33,589,174 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx133,384,207 - 33,424,713 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0139,382,811 - 39,423,319 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0133,577,000 - 33,617,360 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0136,185,916 - 36,226,276 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl136,185,916 - 36,226,276 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0137,582,312 - 37,622,672 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4173,700,392 - 3,740,804 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera132,158,184 - 32,198,529 (+)NCBICelera
Cytogenetic Map1p11NCBI
UBE2QL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v246,699,965 - 6,744,078 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan154,853,572 - 4,897,685 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v056,772,764 - 6,817,062 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
UBE2QL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1347,237,350 - 7,277,847 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl347,238,561 - 7,277,853 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3411,747,421 - 11,788,422 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0347,147,582 - 7,188,609 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl347,147,810 - 7,189,186 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1347,194,330 - 7,235,522 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0347,174,627 - 7,215,642 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0347,387,934 - 7,428,940 (-)NCBIUU_Cfam_GSD_1.0
UBE2QL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1675,428,276 - 75,474,044 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11675,428,272 - 75,474,506 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21681,787,687 - 81,834,321 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UBE2QL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.146,136,142 - 6,179,292 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl46,136,037 - 6,178,048 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606422,539,053 - 22,581,233 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000018756   ⟹   ENSHGLP00000018572
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046247514,193,962 - 4,232,309 (+)Ensembl
RefSeq Acc Id: XM_004845152   ⟹   XP_004845209
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247514,193,968 - 4,228,468 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004845209 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB09384 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000018572
GenBank Protein JAO01885 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004845209   ⟸   XM_004845152
- UniProtKB: G5BJC3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000018572   ⟸   ENSHGLT00000018756


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000013292 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000018756 ENTREZGENE
Gene3D-CATH 3.10.110.10 UniProtKB/TrEMBL
InterPro UBQ-conjugat_E2 UniProtKB/TrEMBL
  UBQ-conjugating_enzyme/RWD UniProtKB/TrEMBL
KEGG Report hgl:101714028 UniProtKB/TrEMBL
NCBI Gene Ube2ql1 ENTREZGENE
Pfam UQ_con UniProtKB/TrEMBL
PROSITE UBC_2 UniProtKB/TrEMBL
SMART UBCc UniProtKB/TrEMBL
Superfamily-SCOP SSF54495 UniProtKB/TrEMBL
UniProt G5BJC3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-19 Ube2ql1  ubiquitin conjugating enzyme E2 QL1  Ube2ql1  ubiquitin conjugating enzyme E2 Q family like 1  Symbol and/or name change 5135510 APPROVED